Protein–RNA interactions for Protein: P60953

CDC42, Cell division control protein 42 homolog, humanhuman

Predictions only

Length 191 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42P60953 SDC2-202ENST00000518385 1583 ntTSL 5 BASIC17.38■□□□□ 0.37
CDC42P60953 SYTL1-208ENST00000543823 2229 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
CDC42P60953 ZNF644-203ENST00000361321 1253 ntTSL 2 BASIC17.38■□□□□ 0.37
CDC42P60953 C19orf24-201ENST00000409293 983 ntAPPRIS P1 TSL 2 BASIC17.38■□□□□ 0.37
CDC42P60953 AL390719.1-204ENST00000412397 1219 ntBASIC17.38■□□□□ 0.37
CDC42P60953 AP001005.4-202ENST00000575325 560 ntTSL 4 BASIC17.38■□□□□ 0.37
CDC42P60953 ATRAID-208ENST00000611786 1256 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
CDC42P60953 WWOX-218ENST00000627394 894 ntTSL 5 BASIC17.38■□□□□ 0.37
CDC42P60953 DNLZ-202ENST00000371739 2934 ntTSL 5 BASIC17.38■□□□□ 0.37
CDC42P60953 STIM2-202ENST00000465503 3613 ntAPPRIS ALT2 TSL 1 (best) BASIC17.38■□□□□ 0.37
CDC42P60953 TAP1-201ENST00000354258 2959 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
CDC42P60953 PSKH2-201ENST00000276616 1322 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
CDC42P60953 ASXL1-212ENST00000620121 5374 ntAPPRIS ALT2 TSL 5 BASIC17.38■□□□□ 0.37
CDC42P60953 DUSP1-201ENST00000239223 2019 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
CDC42P60953 ILF3-203ENST00000449870 6119 ntAPPRIS ALT2 TSL 1 (best) BASIC17.38■□□□□ 0.37
CDC42P60953 CHRFAM7A-202ENST00000397827 2794 ntTSL 5 BASIC17.38■□□□□ 0.37
CDC42P60953 TRAF3-203ENST00000392745 2459 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
CDC42P60953 ZNF394-201ENST00000337673 2179 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
CDC42P60953 IQSEC2-202ENST00000396435 6015 ntAPPRIS ALT2 TSL 1 (best) BASIC17.37■□□□□ 0.37
CDC42P60953 TLK2-203ENST00000346027 3449 ntAPPRIS P3 TSL 1 (best) BASIC17.37■□□□□ 0.37
CDC42P60953 KRT17P1-201ENST00000399211 1546 ntBASIC17.37■□□□□ 0.37
CDC42P60953 GALNT14-202ENST00000349752 2733 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
CDC42P60953 UBE2D2-202ENST00000398733 2702 ntAPPRIS P2 TSL 1 (best) BASIC17.37■□□□□ 0.37
CDC42P60953 PDZD7-201ENST00000370215 2032 ntTSL 2 BASIC17.37■□□□□ 0.37
CDC42P60953 CNOT9-209ENST00000627282 1621 ntTSL 2 BASIC17.37■□□□□ 0.37
CDC42P60953 MAFK-201ENST00000343242 3368 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
CDC42P60953 CITED1-201ENST00000246139 1231 ntAPPRIS P3 TSL 1 (best) BASIC17.37■□□□□ 0.37
CDC42P60953 RRAS-201ENST00000246792 1044 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
CDC42P60953 GRTP1-201ENST00000326039 1294 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
CDC42P60953 RNF5-203ENST00000375094 1168 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
CDC42P60953 MPRIP-203ENST00000395806 527 ntTSL 3 BASIC17.37■□□□□ 0.37
CDC42P60953 HSCB-202ENST00000398941 955 ntTSL 2 BASIC17.37■□□□□ 0.37
CDC42P60953 NPY-202ENST00000405982 565 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
CDC42P60953 ZNF717-203ENST00000477374 1169 ntTSL 2 BASIC17.37■□□□□ 0.37
CDC42P60953 BX890604.1-207ENST00000486571 904 ntTSL 5 BASIC17.37■□□□□ 0.37
CDC42P60953 DIMT1-202ENST00000506390 1208 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
CDC42P60953 FBXL8-203ENST00000518148 1054 ntTSL 2 BASIC17.37■□□□□ 0.37
CDC42P60953 TRIM35-203ENST00000521253 1215 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
CDC42P60953 MCRIP1-203ENST00000538396 925 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
CDC42P60953 GNB5-211ENST00000560116 918 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
CDC42P60953 ACBD4-216ENST00000619916 1276 ntTSL 5 BASIC17.37■□□□□ 0.37
CDC42P60953 PDLIM3-201ENST00000284767 2589 ntTSL 5 BASIC17.37■□□□□ 0.37
CDC42P60953 SPAG1-206ENST00000520643 1723 ntTSL 2 BASIC17.37■□□□□ 0.37
CDC42P60953 RGS3-231ENST00000613049 1726 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
CDC42P60953 DHX33-201ENST00000225296 5618 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
CDC42P60953 KDM1A-202ENST00000400181 3059 ntAPPRIS ALT2 TSL 1 (best) BASIC17.37■□□□□ 0.37
CDC42P60953 LINC01168-201ENST00000461291 5254 ntTSL 2 BASIC17.37■□□□□ 0.37
CDC42P60953 RBCK1-203ENST00000382181 2208 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
CDC42P60953 LRRC32-202ENST00000404995 2656 ntAPPRIS P1 TSL 5 BASIC17.37■□□□□ 0.37
CDC42P60953 DMD-208ENST00000378680 1858 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
CDC42P60953 HOXC10-201ENST00000303460 1936 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
CDC42P60953 GTF3C5-201ENST00000342018 1905 ntTSL 5 BASIC17.37■□□□□ 0.37
CDC42P60953 AC018755.2-202ENST00000429354 1926 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
CDC42P60953 TBC1D4-202ENST00000377636 6364 ntAPPRIS P3 TSL 2 BASIC17.37■□□□□ 0.37
CDC42P60953 KCNC4-203ENST00000413138 3018 ntAPPRIS ALT2 TSL 5 BASIC17.37■□□□□ 0.37
CDC42P60953 B4GALT1-202ENST00000535206 1535 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
CDC42P60953 HOXA9-201ENST00000343483 2060 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
CDC42P60953 FBXL18-205ENST00000620087 2076 ntTSL 5 BASIC17.36■□□□□ 0.37
CDC42P60953 STK25-203ENST00000403346 2210 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
CDC42P60953 DNAJC28-204ENST00000617313 2237 ntAPPRIS P1 TSL 5 BASIC17.36■□□□□ 0.37
CDC42P60953 CARNS1-205ENST00000531040 2968 ntTSL 5 BASIC17.36■□□□□ 0.37
CDC42P60953 FAM208A-209ENST00000493960 5600 ntAPPRIS P2 TSL 5 BASIC17.36■□□□□ 0.37
CDC42P60953 GOSR2-210ENST00000576910 1891 ntAPPRIS ALT1 TSL 5 BASIC17.36■□□□□ 0.37
CDC42P60953 GATAD2A-202ENST00000360315 5671 ntAPPRIS P3 TSL 5 BASIC17.36■□□□□ 0.37
CDC42P60953 GPX1P1-201ENST00000388829 606 ntBASIC17.36■□□□□ 0.37
CDC42P60953 BHLHA9-201ENST00000391429 902 ntAPPRIS P1 BASIC17.36■□□□□ 0.37
CDC42P60953 AC011825.4-201ENST00000582233 473 ntTSL 2 BASIC17.36■□□□□ 0.37
CDC42P60953 ZNF561-AS1-205ENST00000588765 579 ntTSL 4 BASIC17.36■□□□□ 0.37
CDC42P60953 KLK9-202ENST00000594211 754 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
CDC42P60953 BID-214ENST00000617586 542 ntTSL 5 BASIC17.36■□□□□ 0.37
CDC42P60953 MYO19-221ENST00000620640 1186 ntTSL 2 BASIC17.36■□□□□ 0.37
CDC42P60953 WIZ-201ENST00000263381 5695 ntAPPRIS P2 TSL 2 BASIC17.36■□□□□ 0.37
CDC42P60953 PPP1R36-201ENST00000298705 1405 ntAPPRIS P2 TSL 1 (best) BASIC17.36■□□□□ 0.37
CDC42P60953 KRT8P8-201ENST00000434750 1448 ntBASIC17.36■□□□□ 0.37
CDC42P60953 CCAR2-214ENST00000613179 1421 ntTSL 5 BASIC17.36■□□□□ 0.37
CDC42P60953 ACY1-201ENST00000404366 1473 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
CDC42P60953 R3HCC1-210ENST00000625275 1489 ntAPPRIS ALT2 TSL 1 (best) BASIC17.36■□□□□ 0.37
CDC42P60953 AP000997.3-201ENST00000623333 2250 ntBASIC17.36■□□□□ 0.37
CDC42P60953 GNAS-AS1-202ENST00000443966 2341 ntTSL 5 BASIC17.36■□□□□ 0.37
CDC42P60953 SLC25A15-201ENST00000338625 1586 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
CDC42P60953 FBXO27-207ENST00000600828 1557 ntAPPRIS ALT1 TSL 5 BASIC17.36■□□□□ 0.37
CDC42P60953 LHX8-201ENST00000294638 2373 ntAPPRIS P3 TSL 1 (best) BASIC17.36■□□□□ 0.37
CDC42P60953 B3GALNT1-202ENST00000392779 3221 ntAPPRIS P1 TSL 2 BASIC17.36■□□□□ 0.37
CDC42P60953 NAF1-202ENST00000422287 1604 ntAPPRIS ALT2 TSL 1 (best) BASIC17.36■□□□□ 0.37
CDC42P60953 GOLGA6L3-201ENST00000507199 1679 ntBASIC17.36■□□□□ 0.37
CDC42P60953 C19orf54-203ENST00000470681 2521 ntTSL 2 BASIC17.36■□□□□ 0.37
CDC42P60953 RIPK2-201ENST00000220751 2584 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
CDC42P60953 FDXR-203ENST00000420580 1705 ntTSL 2 BASIC17.35■□□□□ 0.37
CDC42P60953 SENP5-201ENST00000323460 6308 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
CDC42P60953 KLHL14-201ENST00000358095 1884 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
CDC42P60953 P2RX2-206ENST00000389110 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC17.35■□□□□ 0.37
CDC42P60953 P2RX2-208ENST00000542301 1881 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
CDC42P60953 SYTL1-201ENST00000318074 1900 ntTSL 2 BASIC17.35■□□□□ 0.37
CDC42P60953 NDRG2-227ENST00000554143 1980 ntAPPRIS ALT1 TSL 2 BASIC17.35■□□□□ 0.37
CDC42P60953 ALKBH4-201ENST00000292566 2105 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
CDC42P60953 NKD2-202ENST00000296849 2155 ntAPPRIS P3 TSL 1 (best) BASIC17.35■□□□□ 0.37
CDC42P60953 MYC-205ENST00000524013 2150 ntAPPRIS ALT1 TSL 1 (best) BASIC17.35■□□□□ 0.37
CDC42P60953 AC135782.1-201ENST00000537498 2154 ntTSL 2 BASIC17.35■□□□□ 0.37
CDC42P60953 FPGS-201ENST00000373225 2278 ntTSL 2 BASIC17.35■□□□□ 0.37
CDC42P60953 MPV17L-201ENST00000287594 5820 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
Retrieved 100 of 98,524 protein–RNA pairs in 46.2 ms