Protein–RNA interactions for Protein: P55289

CDH12, Cadherin-12, humanhuman

Predictions only

Length 794 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH12P55289 DOK7-203ENST00000507039 2551 ntTSL 2 BASIC17.72■□□□□ 0.43
CDH12P55289 ART5-203ENST00000397068 1504 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
CDH12P55289 PTPN12-201ENST00000248594 3406 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
CDH12P55289 RENBP-201ENST00000369997 1322 ntTSL 5 BASIC17.72■□□□□ 0.43
CDH12P55289 KATNAL2-208ENST00000592005 1348 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
CDH12P55289 CCDC17-209ENST00000528266 2181 ntAPPRIS P3 TSL 2 BASIC17.72■□□□□ 0.43
CDH12P55289 EVI5L-201ENST00000270530 3855 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
CDH12P55289 PTPA-201ENST00000337738 2845 ntTSL 2 BASIC17.71■□□□□ 0.43
CDH12P55289 AC005332.8-201ENST00000622750 2735 ntBASIC17.71■□□□□ 0.43
CDH12P55289 ASIC3-202ENST00000349064 1895 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
CDH12P55289 KIF21B-203ENST00000422435 5519 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
CDH12P55289 CAPS-201ENST00000452990 1789 ntTSL 5 BASIC17.71■□□□□ 0.43
CDH12P55289 KIF1BP-204ENST00000626493 2337 ntTSL 5 BASIC17.71■□□□□ 0.43
CDH12P55289 HOXB2-201ENST00000330070 1562 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
CDH12P55289 AMACR-206ENST00000502637 1598 ntTSL 5 BASIC17.71■□□□□ 0.43
CDH12P55289 PTGIR-201ENST00000291294 2107 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
CDH12P55289 WNT8B-201ENST00000343737 2112 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
CDH12P55289 POLR1D-203ENST00000399697 2036 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
CDH12P55289 COBLL1-201ENST00000342193 4898 ntAPPRIS P3 TSL 1 (best) BASIC17.71■□□□□ 0.43
CDH12P55289 SMPD1-201ENST00000342245 2452 ntAPPRIS ALT1 TSL 1 (best) BASIC17.71■□□□□ 0.43
CDH12P55289 TSGA10IP-203ENST00000532620 1925 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
CDH12P55289 TSG101-201ENST00000251968 1824 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
CDH12P55289 AIDA-202ENST00000355727 1072 ntTSL 5 BASIC17.71■□□□□ 0.43
CDH12P55289 GDAP1L1-202ENST00000372952 722 ntTSL 5 BASIC17.71■□□□□ 0.43
CDH12P55289 DGCR6L-202ENST00000405465 962 ntTSL 3 BASIC17.71■□□□□ 0.43
CDH12P55289 LMCD1-AS1-204ENST00000446281 932 ntTSL 5 BASIC17.71■□□□□ 0.43
CDH12P55289 CXXC5-AS1-201ENST00000514287 577 ntTSL 4 BASIC17.71■□□□□ 0.43
CDH12P55289 FAM219B-212ENST00000565772 1249 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
CDH12P55289 LIMD2-206ENST00000578993 602 ntTSL 3 BASIC17.71■□□□□ 0.43
CDH12P55289 CIRBP-213ENST00000587323 1092 ntTSL 5 BASIC17.71■□□□□ 0.43
CDH12P55289 KLF2-202ENST00000592003 564 ntTSL 3 BASIC17.71■□□□□ 0.43
CDH12P55289 FFAR3-202ENST00000594310 1182 ntAPPRIS P1 BASIC17.71■□□□□ 0.43
CDH12P55289 AC008687.6-201ENST00000596318 630 ntBASIC17.71■□□□□ 0.43
CDH12P55289 INO80E-214ENST00000620599 515 ntTSL 2 BASIC17.71■□□□□ 0.43
CDH12P55289 CACNA1A-247ENST00000637769 8648 ntAPPRIS ALT2 TSL 1 (best) BASIC17.71■□□□□ 0.43
CDH12P55289 AKT1S1-207ENST00000391835 3075 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
CDH12P55289 SGSM2-201ENST00000268989 4863 ntAPPRIS P3 TSL 1 (best) BASIC17.71■□□□□ 0.43
CDH12P55289 ZNF692-204ENST00000451251 2065 ntAPPRIS ALT2 TSL 2 BASIC17.71■□□□□ 0.43
CDH12P55289 PLA2G7-201ENST00000274793 1882 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
CDH12P55289 IFFO1-204ENST00000396840 2677 ntAPPRIS ALT1 TSL 5 BASIC17.71■□□□□ 0.43
CDH12P55289 HAUS4-204ENST00000490506 1447 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
CDH12P55289 PABPC1L-204ENST00000255136 2129 ntAPPRIS P1 TSL 5 BASIC17.71■□□□□ 0.42
CDH12P55289 PRAF2-202ENST00000553851 1334 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.42
CDH12P55289 LRRC36-201ENST00000329956 2395 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.42
CDH12P55289 GHDC-212ENST00000593209 1827 ntTSL 5 BASIC17.7■□□□□ 0.42
CDH12P55289 HTR7P1-202ENST00000624664 4411 ntBASIC17.7■□□□□ 0.42
CDH12P55289 SPTBN4-202ENST00000352632 8676 ntAPPRIS P2 TSL 5 BASIC17.7■□□□□ 0.42
CDH12P55289 ZNF395-211ENST00000523202 2068 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
CDH12P55289 GDF5OS-201ENST00000374375 1734 ntAPPRIS P1 TSL 2 BASIC17.7■□□□□ 0.42
CDH12P55289 AHCYL2-201ENST00000325006 5056 ntAPPRIS P3 TSL 1 (best) BASIC17.7■□□□□ 0.42
CDH12P55289 JDP2-202ENST00000419727 972 ntAPPRIS P1 TSL 2 BASIC17.7■□□□□ 0.42
CDH12P55289 ASMTL-AS1-203ENST00000425740 840 ntTSL 2 BASIC17.7■□□□□ 0.42
CDH12P55289 EML2-AS1-202ENST00000591087 838 ntTSL 3 BASIC17.7■□□□□ 0.42
CDH12P55289 ANAPC11-223ENST00000612413 964 ntTSL 3 BASIC17.7■□□□□ 0.42
CDH12P55289 AL121829.2-201ENST00000620908 328 ntBASIC17.7■□□□□ 0.42
CDH12P55289 ARHGAP26-201ENST00000274498 6862 ntAPPRIS P3 TSL 1 (best) BASIC17.7■□□□□ 0.42
CDH12P55289 TMEM106C-202ENST00000429772 1515 ntAPPRIS P1 TSL 2 BASIC17.7■□□□□ 0.42
CDH12P55289 N4BP3-201ENST00000274605 6080 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
CDH12P55289 SREBF2-201ENST00000361204 5240 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
CDH12P55289 ZNF274-203ENST00000424679 2539 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
CDH12P55289 KRT8P8-201ENST00000434750 1448 ntBASIC17.7■□□□□ 0.42
CDH12P55289 CD55-206ENST00000391921 2433 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
CDH12P55289 ZAR1L-202ENST00000533490 1564 ntAPPRIS P1 TSL 5 BASIC17.7■□□□□ 0.42
CDH12P55289 EP300-201ENST00000263253 9587 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
CDH12P55289 HNRNPM-201ENST00000325495 2494 ntAPPRIS P4 TSL 1 (best) BASIC17.7■□□□□ 0.42
CDH12P55289 L2HGDH-203ENST00000421284 1958 ntAPPRIS P1 TSL 2 BASIC17.7■□□□□ 0.42
CDH12P55289 TACO1-201ENST00000258975 1469 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
CDH12P55289 PTGER3-203ENST00000354608 1470 ntAPPRIS ALT2 TSL 5 BASIC17.69■□□□□ 0.42
CDH12P55289 TMEM53-205ENST00000372244 1472 ntTSL 2 BASIC17.69■□□□□ 0.42
CDH12P55289 PDLIM2-207ENST00000409417 1487 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
CDH12P55289 NAT16-204ENST00000455377 1492 ntAPPRIS P2 TSL 1 (best) BASIC17.69■□□□□ 0.42
CDH12P55289 AIPL1-209ENST00000575265 2111 ntAPPRIS ALT2 TSL 1 (best) BASIC17.69■□□□□ 0.42
CDH12P55289 UTP18-201ENST00000225298 1894 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
CDH12P55289 SERPINF2-202ENST00000382061 2265 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
CDH12P55289 ITPK1-202ENST00000354313 2803 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
CDH12P55289 SIGLEC10-204ENST00000436984 1776 ntTSL 2 BASIC17.69■□□□□ 0.42
CDH12P55289 PRR5-201ENST00000006251 1767 ntTSL 2 BASIC17.69■□□□□ 0.42
CDH12P55289 B4GALT4-202ENST00000393765 2459 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
CDH12P55289 LRRC26-201ENST00000371542 1209 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
CDH12P55289 TNIK-208ENST00000465393 750 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
CDH12P55289 LEF1-AS1-203ENST00000507799 459 ntTSL 3 BASIC17.69■□□□□ 0.42
CDH12P55289 AC016065.1-203ENST00000523225 1017 ntTSL 3 BASIC17.69■□□□□ 0.42
CDH12P55289 RGMA-211ENST00000557420 989 ntTSL 3 BASIC17.69■□□□□ 0.42
CDH12P55289 ANAPC11-219ENST00000583839 499 ntAPPRIS P1 TSL 2 BASIC17.69■□□□□ 0.42
CDH12P55289 RASSF1-210ENST00000616212 1842 ntTSL 2 BASIC17.69■□□□□ 0.42
CDH12P55289 ZNF696-201ENST00000330143 2795 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
CDH12P55289 NFS1-214ENST00000541387 1436 ntTSL 2 BASIC17.69■□□□□ 0.42
CDH12P55289 MPV17L2-204ENST00000599612 1408 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
CDH12P55289 AATF-208ENST00000619387 2141 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
CDH12P55289 SLC38A8-201ENST00000299709 1308 ntAPPRIS P1 TSL 5 BASIC17.69■□□□□ 0.42
CDH12P55289 POFUT2-201ENST00000331343 4825 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
CDH12P55289 AP001626.1-201ENST00000424890 2854 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
CDH12P55289 AGER-207ENST00000375076 1492 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
CDH12P55289 AP003774.1-201ENST00000316124 2340 ntTSL 2 BASIC17.69■□□□□ 0.42
CDH12P55289 NAP1L5-201ENST00000323061 2321 ntAPPRIS P1 BASIC17.69■□□□□ 0.42
CDH12P55289 MBIP-203ENST00000416007 1648 ntAPPRIS P3 TSL 1 (best) BASIC17.69■□□□□ 0.42
CDH12P55289 LIN28B-AS1-203ENST00000636682 1797 ntTSL 3 BASIC17.68■□□□□ 0.42
CDH12P55289 SIL1-202ENST00000394817 1923 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
CDH12P55289 NFKBIZ-201ENST00000326151 2058 ntTSL 2 BASIC17.68■□□□□ 0.42
CDH12P55289 EGFR-202ENST00000342916 2239 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
Retrieved 100 of 98,524 protein–RNA pairs in 38.9 ms