Protein–RNA interactions for Protein: P53999

SUB1, Activated RNA polymerase II transcriptional coactivator p15, humanhuman

Known RBP eCLIP

Length 127 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SUB1P53999 FLII-222ENST00000579294 3936 ntTSL 1 (best) BASIC9.04□□□□□ -0.961e-8■■□□□ 13
SUB1P53999 PPM1G-202ENST00000472077 3752 ntTSL 27.44□□□□□ -1.225e-9■■□□□ 13
SUB1P53999 BANF1-207ENST00000530204 586 ntTSL 57.4□□□□□ -1.223e-13■■□□□ 13
SUB1P53999 BANF1-204ENST00000524663 251 ntTSL 37.04□□□□□ -1.283e-13■■□□□ 13
SUB1P53999 ATP6V1A-204ENST00000470455 2266 ntTSL 26.59□□□□□ -1.356e-7■■□□□ 13
SUB1P53999 PPP1CC-208ENST00000551676 1581 ntTSL 2 BASIC20.47■□□□□ 0.871e-10■■□□□ 13
SUB1P53999 DAZAP1-202ENST00000336761 2290 ntTSL 5 BASIC19.7■□□□□ 0.746e-7■■□□□ 13
SUB1P53999 DAZAP1-205ENST00000587079 2086 ntAPPRIS ALT1 TSL 5 BASIC18.64■□□□□ 0.576e-7■■□□□ 13
SUB1P53999 DAZAP1-201ENST00000233078 2160 ntAPPRIS P2 TSL 1 (best) BASIC18.26■□□□□ 0.516e-7■■□□□ 13
SUB1P53999 DAZAP1-211ENST00000592522 2157 ntAPPRIS ALT1 TSL 5 BASIC17.4■□□□□ 0.386e-7■■□□□ 13
SUB1P53999 HSPA8-202ENST00000453788 2004 ntTSL 1 (best) BASIC15.58■□□□□ 0.095e-7■■□□□ 12.9
SUB1P53999 HSPA8-224ENST00000534624 2463 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.25e-7■■□□□ 12.9
SUB1P53999 HSPA8-221ENST00000533540 1826 ntTSL 5 BASIC10.77□□□□□ -0.685e-7■■□□□ 12.9
SUB1P53999 PICALM-209ENST00000528398 2049 ntTSL 2 BASIC2.08□□□□□ -2.081e-13■■□□□ 12.9
SUB1P53999 GLUL-211ENST00000489818 683 ntTSL 37.09□□□□□ -1.272e-6■■□□□ 12.9
SUB1P53999 GLUL-208ENST00000475808 868 ntTSL 26.54□□□□□ -1.362e-6■■□□□ 12.9
SUB1P53999 GLUL-206ENST00000462444 793 ntTSL 26.44□□□□□ -1.382e-6■■□□□ 12.9
SUB1P53999 GLUL-209ENST00000480604 908 ntTSL 56.27□□□□□ -1.412e-6■■□□□ 12.9
SUB1P53999 PPT1-208ENST00000529905 1836 ntTSL 511.81□□□□□ -0.522e-9■■□□□ 12.9
SUB1P53999 PPT1-214ENST00000641381 618 nt4.08□□□□□ -1.762e-9■■□□□ 12.9
SUB1P53999 SLC6A8-210ENST00000485324 2401 ntTSL 216.31■□□□□ 0.28e-9■■□□□ 12.9
SUB1P53999 ACTB-201ENST00000331789 1917 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.123e-16■■□□□ 12.8
SUB1P53999 ACTB-207ENST00000462494 2245 ntTSL 513.68□□□□□ -0.223e-16■■□□□ 12.8
SUB1P53999 ACTB-204ENST00000425660 1845 ntTSL 1 (best)12.12□□□□□ -0.473e-16■■□□□ 12.8
SUB1P53999 MYL6-217ENST00000550639 419 ntTSL 57.35□□□□□ -1.234e-7■■□□□ 12.8
SUB1P53999 PRDX2-203ENST00000466174 1717 ntTSL 1 (best)12.2□□□□□ -0.463e-31■■□□□ 12.8
SUB1P53999 PRDX2-201ENST00000301522 987 ntAPPRIS P1 TSL 1 (best) BASIC8.96□□□□□ -0.983e-31■■□□□ 12.8
SUB1P53999 PRDX2-202ENST00000334482 784 ntTSL 3 BASIC8.03□□□□□ -1.123e-31■■□□□ 12.8
SUB1P53999 HOOK2-213ENST00000589765 108 ntTSL 56.85□□□□□ -1.313e-31■■□□□ 12.8
SUB1P53999 OLA1-209ENST00000497760 722 ntTSL 21.07□□□□□ -2.244e-15■■□□□ 12.8
SUB1P53999 ATP6V0C-201ENST00000330398 1175 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.183e-7■■□□□ 12.8
SUB1P53999 ATP6V0C-202ENST00000564973 1081 ntTSL 2 BASIC13.84□□□□□ -0.193e-7■■□□□ 12.8
SUB1P53999 AC093525.2-201ENST00000564543 1944 ntAPPRIS P1 TSL 2 BASIC12.46□□□□□ -0.423e-7■■□□□ 12.8
SUB1P53999 AC093525.1-201ENST00000569317 596 ntAPPRIS P1 TSL 3 BASIC11.55□□□□□ -0.563e-7■■□□□ 12.8
SUB1P53999 IFITM2-201ENST00000399815 382 ntTSL 310.14□□□□□ -0.791e-6■■□□□ 12.8
SUB1P53999 EEF1B2-207ENST00000445505 515 ntTSL 514.21□□□□□ -0.138e-11■■□□□ 12.8
SUB1P53999 EEF1B2-202ENST00000392221 880 ntAPPRIS P1 TSL 2 BASIC12.34□□□□□ -0.438e-11■■□□□ 12.8
SUB1P53999 EEF1B2-201ENST00000236957 844 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.548e-11■■□□□ 12.8
SUB1P53999 EEF1B2-210ENST00000479587 701 ntTSL 211.15□□□□□ -0.628e-11■■□□□ 12.8
SUB1P53999 EEF1B2-203ENST00000392222 1098 ntAPPRIS P1 TSL 1 (best) BASIC10.11□□□□□ -0.798e-11■■□□□ 12.8
SUB1P53999 EEF1B2-209ENST00000460760 1025 ntTSL 28□□□□□ -1.138e-11■■□□□ 12.8
SUB1P53999 EEF1B2-205ENST00000429769 912 ntTSL 57.96□□□□□ -1.148e-11■■□□□ 12.8
SUB1P53999 EEF1B2-204ENST00000415904 649 ntTSL 37.04□□□□□ -1.288e-11■■□□□ 12.8
SUB1P53999 EEF1B2-206ENST00000435123 389 ntTSL 56.78□□□□□ -1.328e-11■■□□□ 12.8
SUB1P53999 EEF1B2-208ENST00000455150 670 ntTSL 54.15□□□□□ -1.758e-11■■□□□ 12.8
SUB1P53999 PSMD2-218ENST00000491494 371 ntTSL 212.83□□□□□ -0.361e-8■■□□□ 12.8
SUB1P53999 PSMD2-212ENST00000473991 590 ntTSL 39.41□□□□□ -0.91e-8■■□□□ 12.8
SUB1P53999 QARS-249ENST00000637113 1369 ntTSL 512.7□□□□□ -0.389e-7■■□□□ 12.8
SUB1P53999 QARS-208ENST00000459870 1317 ntTSL 510.29□□□□□ -0.769e-7■■□□□ 12.8
SUB1P53999 QARS-205ENST00000430182 2399 ntTSL 210.12□□□□□ -0.799e-7■■□□□ 12.8
SUB1P53999 QARS-202ENST00000414533 2412 ntTSL 2 BASIC9.79□□□□□ -0.849e-7■■□□□ 12.8
SUB1P53999 QARS-211ENST00000470113 954 ntTSL 59.63□□□□□ -0.879e-7■■□□□ 12.8
SUB1P53999 QARS-248ENST00000636669 2410 ntTSL 59.61□□□□□ -0.879e-7■■□□□ 12.8
SUB1P53999 QARS-216ENST00000482248 887 ntTSL 58.66□□□□□ -1.029e-7■■□□□ 12.8
SUB1P53999 QARS-247ENST00000636018 2171 ntTSL 58.65□□□□□ -1.039e-7■■□□□ 12.8
SUB1P53999 QARS-209ENST00000464962 2362 ntTSL 1 (best) BASIC8.38□□□□□ -1.079e-7■■□□□ 12.8
SUB1P53999 QARS-201ENST00000306125 2827 ntAPPRIS P1 TSL 1 (best) BASIC8.19□□□□□ -1.19e-7■■□□□ 12.8
SUB1P53999 QARS-207ENST00000453392 859 ntTSL 57.12□□□□□ -1.279e-7■■□□□ 12.8
SUB1P53999 QARS-250ENST00000637281 1327 ntTSL 55.25□□□□□ -1.579e-7■■□□□ 12.8
SUB1P53999 RPL14-205ENST00000461368 170 ntTSL 21.11□□□□□ -2.233e-78■■□□□ 12.7
SUB1P53999 RPL8-212ENST00000532702 745 ntTSL 211.87□□□□□ -0.515e-26■■□□□ 12.7
SUB1P53999 ACADVL-209ENST00000578033 562 ntTSL 213.74□□□□□ -0.212e-6■■□□□ 12.7
SUB1P53999 NCKAP1L-202ENST00000545638 3612 ntTSL 2 BASIC7.29□□□□□ -1.242e-7■■□□□ 12.7
SUB1P53999 NCKAP1L-201ENST00000293373 9016 ntAPPRIS P1 TSL 1 (best) BASIC7.04□□□□□ -1.282e-7■■□□□ 12.7
SUB1P53999 SNX3-203ENST00000368979 1537 ntTSL 218.92■□□□□ 0.625e-28■■□□□ 12.7
SUB1P53999 SNX3-201ENST00000230085 1755 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.225e-28■■□□□ 12.7
SUB1P53999 SNX3-204ENST00000426155 1072 ntTSL 1 (best) BASIC10.22□□□□□ -0.775e-28■■□□□ 12.7
SUB1P53999 TSR2-201ENST00000375151 1534 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.314e-8■■□□□ 12.7
SUB1P53999 TXN-203ENST00000487892 540 ntTSL 22.8□□□□□ -1.962e-6■■□□□ 12.7
SUB1P53999 RPL30-210ENST00000521534 573 ntTSL 21.97□□□□□ -2.096e-10■■□□□ 12.7
SUB1P53999 PRKDC-206ENST00000536429 659 ntTSL 39.87□□□□□ -0.832e-6■■□□□ 12.7
SUB1P53999 DLAT-204ENST00000531306 1766 ntTSL 213□□□□□ -0.332e-6■■□□□ 12.7
SUB1P53999 HIST1H4A-201ENST00000617569 312 ntAPPRIS P1 BASIC11.38□□□□□ -0.597e-15■■□□□ 12.7
SUB1P53999 FNTA-201ENST00000302279 1840 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.611e-6■■□□□ 12.7
SUB1P53999 UBE2E3-202ENST00000410062 1570 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.511e-6■■□□□ 12.7
SUB1P53999 FNTA-208ENST00000529687 1950 ntTSL 2 BASIC17.64■□□□□ 0.411e-6■■□□□ 12.7
SUB1P53999 BRD2-214ENST00000496118 735 ntTSL 1 (best) BASIC15.9■□□□□ 0.141e-6■■□□□ 12.7
SUB1P53999 UBE2E3-201ENST00000392415 1347 ntAPPRIS P1 TSL 3 BASIC15.43■□□□□ 0.061e-6■■□□□ 12.7
SUB1P53999 AK3-202ENST00000381809 2736 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.011e-6■■□□□ 12.7
SUB1P53999 BRD2-216ENST00000581002 550 ntTSL 414.94□□□□□ -0.021e-6■■□□□ 12.7
SUB1P53999 BRD2-201ENST00000374825 4894 ntAPPRIS P3 TSL 1 (best) BASIC14.94□□□□□ -0.021e-6■■□□□ 12.7
SUB1P53999 UBE2E3-209ENST00000602710 1556 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.021e-6■■□□□ 12.7
SUB1P53999 BLVRB-203ENST00000597870 1392 ntTSL 514.28□□□□□ -0.122e-48■■□□□ 12.7
SUB1P53999 BRD2-215ENST00000580234 718 ntTSL 414.14□□□□□ -0.151e-6■■□□□ 12.7
SUB1P53999 DHX30-205ENST00000445061 4065 ntAPPRIS P2 TSL 1 (best) BASIC14.1□□□□□ -0.151e-6■■□□□ 12.7
SUB1P53999 LMAN1-201ENST00000251047 5521 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.161e-6■■□□□ 12.7
SUB1P53999 PSMB4-206ENST00000495288 986 ntTSL 213.9□□□□□ -0.181e-6■■□□□ 12.7
SUB1P53999 BRD2-202ENST00000374831 4807 ntAPPRIS P3 TSL 1 (best) BASIC13.77□□□□□ -0.211e-6■■□□□ 12.7
SUB1P53999 GCN1-203ENST00000547369 595 ntTSL 313.64□□□□□ -0.231e-6■■□□□ 12.7
SUB1P53999 FNTA-205ENST00000526755 4676 ntTSL 1 (best)13.15□□□□□ -0.31e-6■■□□□ 12.7
SUB1P53999 GABARAP-204ENST00000571253 837 ntTSL 2 BASIC12.85□□□□□ -0.351e-6■■□□□ 12.7
SUB1P53999 DHX30-208ENST00000461905 591 ntTSL 212.26□□□□□ -0.451e-6■■□□□ 12.7
SUB1P53999 BRD2-212ENST00000482914 4834 ntTSL 1 (best)12.12□□□□□ -0.471e-6■■□□□ 12.7
SUB1P53999 BRD2-213ENST00000495733 3404 ntTSL 211.72□□□□□ -0.531e-6■■□□□ 12.7
SUB1P53999 GABARAP-205ENST00000573928 476 ntTSL 1 (best) BASIC11.66□□□□□ -0.541e-6■■□□□ 12.7
SUB1P53999 DOT1L-201ENST00000398665 7436 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.551e-6■■□□□ 12.7
SUB1P53999 DHX30-201ENST00000348968 3994 ntTSL 5 BASIC11.36□□□□□ -0.591e-6■■□□□ 12.7
SUB1P53999 DHX30-215ENST00000619982 3574 ntAPPRIS ALT1 TSL 5 BASIC11.1□□□□□ -0.631e-6■■□□□ 12.7
SUB1P53999 BLVRB-201ENST00000263368 873 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.652e-48■■□□□ 12.7
SUB1P53999 BRD2-206ENST00000456339 887 ntTSL 410.93□□□□□ -0.661e-6■■□□□ 12.7
Retrieved 100 of 11,644 protein–RNA pairs in 197.1 ms