Protein–RNA interactions for Protein: P51686

CCR9, C-C chemokine receptor type 9, humanhuman

Predictions only

Length 369 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCR9P51686 RNF121-201ENST00000361756 2625 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
CCR9P51686 NR4A2-204ENST00000409572 2878 ntAPPRIS P1 TSL 5 BASIC16.74■□□□□ 0.27
CCR9P51686 FZD10-202ENST00000539839 3282 ntBASIC16.74■□□□□ 0.27
CCR9P51686 RSPO4-201ENST00000217260 2707 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
CCR9P51686 AC087457.1-201ENST00000503496 2727 ntTSL 2 BASIC16.74■□□□□ 0.27
CCR9P51686 LLGL2-203ENST00000392550 3509 ntAPPRIS P2 TSL 1 (best) BASIC16.74■□□□□ 0.27
CCR9P51686 TEKT5-201ENST00000283025 1612 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
CCR9P51686 CALM3-201ENST00000291295 2289 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
CCR9P51686 PLEKHB1-203ENST00000398492 2275 ntAPPRIS ALT1 TSL 1 (best) BASIC16.73■□□□□ 0.27
CCR9P51686 CYR61-201ENST00000451137 2290 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
CCR9P51686 FGFR3-202ENST00000340107 4293 ntAPPRIS ALT2 TSL 5 BASIC16.73■□□□□ 0.27
CCR9P51686 BSG-201ENST00000333511 1974 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
CCR9P51686 BICD1-207ENST00000551848 1962 ntBASIC16.73■□□□□ 0.27
CCR9P51686 MSL1-202ENST00000398532 4707 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
CCR9P51686 PTTG1IP-204ENST00000445724 2497 ntTSL 2 BASIC16.73■□□□□ 0.27
CCR9P51686 HNF1A-202ENST00000400024 2337 ntTSL 2 BASIC16.73■□□□□ 0.27
CCR9P51686 KDM1A-202ENST00000400181 3059 ntAPPRIS ALT2 TSL 1 (best) BASIC16.73■□□□□ 0.27
CCR9P51686 CAVIN3-201ENST00000303927 1174 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
CCR9P51686 NENF-201ENST00000366988 949 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
CCR9P51686 PCMT1-201ENST00000367378 1293 ntAPPRIS P3 TSL 1 (best) BASIC16.73■□□□□ 0.27
CCR9P51686 CBY3-201ENST00000376974 785 ntAPPRIS P1 TSL 2 BASIC16.73■□□□□ 0.27
CCR9P51686 GRPEL2-202ENST00000416916 1006 ntTSL 2 BASIC16.73■□□□□ 0.27
CCR9P51686 HAGLROS-201ENST00000426615 1121 ntTSL 2 BASIC16.73■□□□□ 0.27
CCR9P51686 ARF3-202ENST00000447318 1089 ntTSL 2 BASIC16.73■□□□□ 0.27
CCR9P51686 GATS-209ENST00000454084 1030 ntTSL 3 BASIC16.73■□□□□ 0.27
CCR9P51686 CD151-201ENST00000322008 1548 ntAPPRIS P2 TSL 1 (best) BASIC16.73■□□□□ 0.27
CCR9P51686 NFE2-204ENST00000553070 1523 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
CCR9P51686 GAS7-205ENST00000542249 1799 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
CCR9P51686 SNRPN-207ENST00000554227 1763 ntTSL 5 BASIC16.73■□□□□ 0.27
CCR9P51686 PDZD7-201ENST00000370215 2032 ntTSL 2 BASIC16.73■□□□□ 0.27
CCR9P51686 IFRD2-204ENST00000436390 2275 ntAPPRIS P1 TSL 2 BASIC16.73■□□□□ 0.27
CCR9P51686 RNH1-201ENST00000354420 1894 ntAPPRIS P1 TSL 5 BASIC16.73■□□□□ 0.27
CCR9P51686 AL354751.1-201ENST00000412768 1863 ntBASIC16.73■□□□□ 0.27
CCR9P51686 FAM219B-204ENST00000563119 2721 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
CCR9P51686 KXD1-202ENST00000539106 1496 ntAPPRIS P1 TSL 3 BASIC16.73■□□□□ 0.27
CCR9P51686 SPAG9-202ENST00000357122 4761 ntAPPRIS P2 TSL 1 (best) BASIC16.73■□□□□ 0.27
CCR9P51686 NF2-203ENST00000353887 1845 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
CCR9P51686 FDFT1-209ENST00000525900 1596 ntTSL 5 BASIC16.72■□□□□ 0.27
CCR9P51686 NFKB2-201ENST00000189444 3011 ntAPPRIS ALT1 TSL 1 (best) BASIC16.72■□□□□ 0.27
CCR9P51686 ZNF696-201ENST00000330143 2795 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
CCR9P51686 KAZN-203ENST00000376030 6030 ntAPPRIS P1 TSL 5 BASIC16.72■□□□□ 0.27
CCR9P51686 PRSS33-201ENST00000293851 1694 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
CCR9P51686 MAP6-201ENST00000304771 3334 ntAPPRIS P3 TSL 1 (best) BASIC16.72■□□□□ 0.27
CCR9P51686 BAIAP2-203ENST00000416299 1442 ntTSL 2 BASIC16.72■□□□□ 0.27
CCR9P51686 MTAP-204ENST00000460874 1434 ntTSL 2 BASIC16.72■□□□□ 0.27
CCR9P51686 CBX2-202ENST00000310942 4644 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
CCR9P51686 UBE2D2-202ENST00000398733 2702 ntAPPRIS P2 TSL 1 (best) BASIC16.72■□□□□ 0.27
CCR9P51686 PLA2G7-201ENST00000274793 1882 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
CCR9P51686 PSTPIP1-203ENST00000558012 1896 ntAPPRIS P2 TSL 1 (best) BASIC16.72■□□□□ 0.27
CCR9P51686 ZDHHC8P1-204ENST00000433168 2309 ntTSL 2 BASIC16.72■□□□□ 0.27
CCR9P51686 SBDS-201ENST00000246868 1631 ntAPPRIS P2 TSL 1 (best) BASIC16.72■□□□□ 0.27
CCR9P51686 MED10-201ENST00000255764 1141 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
CCR9P51686 RPS14-201ENST00000312037 711 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
CCR9P51686 BET1L-207ENST00000529614 560 ntTSL 5 BASIC16.72■□□□□ 0.27
CCR9P51686 SCO2-203ENST00000535425 1002 ntAPPRIS P1 TSL 2 BASIC16.72■□□□□ 0.27
CCR9P51686 CAMTA1-216ENST00000557126 486 ntTSL 2 BASIC16.72■□□□□ 0.27
CCR9P51686 SEC23A-AS1-201ENST00000557350 500 ntTSL 3 BASIC16.72■□□□□ 0.27
CCR9P51686 VPS53-216ENST00000574029 585 ntTSL 4 BASIC16.72■□□□□ 0.27
CCR9P51686 PTGIR-202ENST00000594275 699 ntTSL 3 BASIC16.72■□□□□ 0.27
CCR9P51686 PTGIR-206ENST00000598865 724 ntTSL 3 BASIC16.72■□□□□ 0.27
CCR9P51686 ANAPC11-223ENST00000612413 964 ntTSL 3 BASIC16.72■□□□□ 0.27
CCR9P51686 AC120498.8-201ENST00000614275 531 ntBASIC16.72■□□□□ 0.27
CCR9P51686 CCDC120-204ENST00000597275 2752 ntAPPRIS P3 TSL 2 BASIC16.72■□□□□ 0.27
CCR9P51686 LTBP3-202ENST00000322147 4046 ntAPPRIS P3 TSL 1 (best) BASIC16.72■□□□□ 0.27
CCR9P51686 ZNF274-203ENST00000424679 2539 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
CCR9P51686 TAPT1-201ENST00000405303 4591 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
CCR9P51686 IFRD1-201ENST00000005558 1834 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
CCR9P51686 HEXDC-203ENST00000577944 1820 ntTSL 5 BASIC16.72■□□□□ 0.27
CCR9P51686 SMC5-AS1-201ENST00000594708 1818 ntTSL 2 BASIC16.72■□□□□ 0.27
CCR9P51686 SREBF2-201ENST00000361204 5240 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
CCR9P51686 AGER-207ENST00000375076 1492 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
CCR9P51686 SRSF2-202ENST00000359995 1927 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
CCR9P51686 SIL1-202ENST00000394817 1923 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
CCR9P51686 HOXB2-201ENST00000330070 1562 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
CCR9P51686 TIMP4-201ENST00000287814 1650 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
CCR9P51686 XKR8-201ENST00000373884 2692 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
CCR9P51686 TRIM63-201ENST00000374272 1770 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
CCR9P51686 DMD-208ENST00000378680 1858 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
CCR9P51686 TBXAS1-204ENST00000416849 2505 ntTSL 5 BASIC16.71■□□□□ 0.27
CCR9P51686 MPV17L2-204ENST00000599612 1408 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
CCR9P51686 RELA-202ENST00000406246 2700 ntAPPRIS P3 TSL 1 (best) BASIC16.71■□□□□ 0.27
CCR9P51686 P4HB-203ENST00000439918 1502 ntTSL 5 BASIC16.71■□□□□ 0.27
CCR9P51686 MAN1B1-207ENST00000535144 2296 ntTSL 2 BASIC16.71■□□□□ 0.27
CCR9P51686 PLIN5-201ENST00000381848 2470 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
CCR9P51686 SPNS3-201ENST00000355530 2133 ntAPPRIS P1 TSL 2 BASIC16.71■□□□□ 0.27
CCR9P51686 EMC6-202ENST00000397133 762 ntAPPRIS P1 TSL 2 BASIC16.71■□□□□ 0.27
CCR9P51686 AL161908.1-201ENST00000451449 449 ntTSL 2 BASIC16.71■□□□□ 0.27
CCR9P51686 RHEB-204ENST00000472642 900 ntTSL 3 BASIC16.71■□□□□ 0.27
CCR9P51686 AC097658.1-201ENST00000475555 843 ntBASIC16.71■□□□□ 0.27
CCR9P51686 NCAPD3-204ENST00000526422 1060 ntAPPRIS ALT2 TSL 2 BASIC16.71■□□□□ 0.27
CCR9P51686 AC006435.1-201ENST00000571775 1065 ntTSL 5 BASIC16.71■□□□□ 0.27
CCR9P51686 MIR4758-201ENST00000577688 71 ntBASIC16.71■□□□□ 0.27
CCR9P51686 CIRBP-213ENST00000587323 1092 ntTSL 5 BASIC16.71■□□□□ 0.27
CCR9P51686 AC060766.5-201ENST00000590539 871 ntBASIC16.71■□□□□ 0.27
CCR9P51686 AC010646.1-201ENST00000594059 515 ntAPPRIS P1 TSL 4 BASIC16.71■□□□□ 0.27
CCR9P51686 MYC-209ENST00000641252 345 ntBASIC16.71■□□□□ 0.27
CCR9P51686 SDC2-202ENST00000518385 1583 ntTSL 5 BASIC16.71■□□□□ 0.27
CCR9P51686 ESPN-216ENST00000636330 4731 ntAPPRIS ALT2 TSL 5 BASIC16.71■□□□□ 0.27
CCR9P51686 LGI4-201ENST00000310123 2814 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
CCR9P51686 EFTUD1P1-204ENST00000560401 1798 ntBASIC16.71■□□□□ 0.27
Retrieved 100 of 98,524 protein–RNA pairs in 20 ms