Protein–RNA interactions for Protein: O75382

TRIM3, Tripartite motif-containing protein 3, humanhuman

Predicted RBP Predictions only

Length 744 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM3O75382 LINC01122-201ENST00000422723 675 ntTSL 3 BASIC17.72■□□□□ 0.43
TRIM3O75382 GXYLT1P3-201ENST00000453058 1193 ntBASIC17.72■□□□□ 0.43
TRIM3O75382 ALKAL1-202ENST00000523939 536 ntAPPRIS ALT2 TSL 1 (best) BASIC17.72■□□□□ 0.43
TRIM3O75382 CDC42EP2-202ENST00000533419 1279 ntAPPRIS P1 TSL 3 BASIC17.72■□□□□ 0.43
TRIM3O75382 BX088651.1-201ENST00000540551 451 ntBASIC17.72■□□□□ 0.43
TRIM3O75382 C12orf76-208ENST00000551185 496 ntTSL 2 BASIC17.72■□□□□ 0.43
TRIM3O75382 CYB561-214ENST00000582034 1193 ntTSL 2 BASIC17.72■□□□□ 0.43
TRIM3O75382 REXO1L10P-201ENST00000615707 1290 ntBASIC17.72■□□□□ 0.43
TRIM3O75382 REXO1L12P-201ENST00000622156 912 ntBASIC17.72■□□□□ 0.43
TRIM3O75382 AC131212.4-201ENST00000623606 975 ntBASIC17.72■□□□□ 0.43
TRIM3O75382 P2RY6-212ENST00000618468 2431 ntAPPRIS P1 TSL 3 BASIC17.72■□□□□ 0.43
TRIM3O75382 FBXL20-202ENST00000394294 2309 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
TRIM3O75382 AKAP8L-201ENST00000397410 2146 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
TRIM3O75382 CPQ-201ENST00000220763 1947 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
TRIM3O75382 FAM110A-204ENST00000381941 1809 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
TRIM3O75382 TMSB4X-203ENST00000380636 1702 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
TRIM3O75382 NAT6-201ENST00000354862 1330 ntAPPRIS P3 TSL 1 (best) BASIC17.72■□□□□ 0.43
TRIM3O75382 SLC6A9-201ENST00000357730 2168 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
TRIM3O75382 SPHK1-207ENST00000590959 1851 ntAPPRIS ALT2 TSL 1 (best) BASIC17.71■□□□□ 0.43
TRIM3O75382 AL158211.5-201ENST00000623583 2518 ntBASIC17.71■□□□□ 0.43
TRIM3O75382 HNRNPLL-206ENST00000410076 1687 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
TRIM3O75382 PGM1-205ENST00000540265 2345 ntTSL 2 BASIC17.71■□□□□ 0.43
TRIM3O75382 PHF12-205ENST00000577226 7679 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
TRIM3O75382 POLD3-203ENST00000527458 2122 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
TRIM3O75382 TESMIN-201ENST00000255087 2579 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
TRIM3O75382 SOX15-201ENST00000250055 1396 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
TRIM3O75382 KRT1-201ENST00000252244 2451 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
TRIM3O75382 CTDSP2-204ENST00000548823 1368 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
TRIM3O75382 LGALS9C-209ENST00000581545 1378 ntTSL 5 BASIC17.71■□□□□ 0.43
TRIM3O75382 UMOD-203ENST00000396138 2399 ntAPPRIS ALT2 TSL 5 BASIC17.71■□□□□ 0.43
TRIM3O75382 ST3GAL3-204ENST00000335430 1805 ntTSL 5 BASIC17.71■□□□□ 0.43
TRIM3O75382 VSIG2-202ENST00000403470 1191 ntTSL 2 BASIC17.71■□□□□ 0.43
TRIM3O75382 LMCD1-AS1-204ENST00000446281 932 ntTSL 5 BASIC17.71■□□□□ 0.43
TRIM3O75382 SMAGP-204ENST00000603838 816 ntTSL 2 BASIC17.71■□□□□ 0.43
TRIM3O75382 KANK3-205ENST00000610351 1191 ntTSL 5 BASIC17.71■□□□□ 0.43
TRIM3O75382 MAPK9-207ENST00000452135 4815 ntAPPRIS P5 TSL 5 BASIC17.71■□□□□ 0.43
TRIM3O75382 CYTH1-209ENST00000589296 2159 ntTSL 5 BASIC17.71■□□□□ 0.43
TRIM3O75382 PPM1H-201ENST00000228705 6353 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
TRIM3O75382 TNFRSF1A-201ENST00000162749 2223 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
TRIM3O75382 AHCYL1-203ENST00000393614 4313 ntTSL 2 BASIC17.71■□□□□ 0.42
TRIM3O75382 UBE2QL1-201ENST00000399816 4317 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.42
TRIM3O75382 PCGF3-208ENST00000470161 1652 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.42
TRIM3O75382 EVL-202ENST00000402714 2353 ntAPPRIS ALT1 TSL 1 (best) BASIC17.71■□□□□ 0.42
TRIM3O75382 BMP8B-201ENST00000372827 4822 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
TRIM3O75382 PHF12-201ENST00000268756 2957 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
TRIM3O75382 BCAP29-202ENST00000379117 1946 ntAPPRIS P1 TSL 5 BASIC17.7■□□□□ 0.42
TRIM3O75382 ARNT-212ENST00000515192 2892 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
TRIM3O75382 TTC19-201ENST00000261647 3002 ntAPPRIS P2 TSL 1 (best) BASIC17.7■□□□□ 0.42
TRIM3O75382 COL18A1-202ENST00000355480 5924 ntAPPRIS P3 TSL 1 (best) BASIC17.7■□□□□ 0.42
TRIM3O75382 POC1A-202ENST00000394970 1999 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
TRIM3O75382 L2HGDH-203ENST00000421284 1958 ntAPPRIS P1 TSL 2 BASIC17.7■□□□□ 0.42
TRIM3O75382 ASCC2-202ENST00000397771 2823 ntAPPRIS P1 TSL 5 BASIC17.7■□□□□ 0.42
TRIM3O75382 KRT16-201ENST00000301653 1644 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
TRIM3O75382 GCGR-202ENST00000570996 1872 ntAPPRIS ALT2 TSL 2 BASIC17.7■□□□□ 0.42
TRIM3O75382 RRAS-201ENST00000246792 1044 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
TRIM3O75382 GLI4-202ENST00000344692 1012 ntTSL 2 BASIC17.7■□□□□ 0.42
TRIM3O75382 UBE2F-205ENST00000414443 2100 ntTSL 2 BASIC17.7■□□□□ 0.42
TRIM3O75382 AC103855.2-201ENST00000533315 573 ntTSL 4 BASIC17.7■□□□□ 0.42
TRIM3O75382 AC117500.4-201ENST00000542797 617 ntTSL 3 BASIC17.7■□□□□ 0.42
TRIM3O75382 TMEM235-204ENST00000551068 1187 ntAPPRIS P1 TSL 5 BASIC17.7■□□□□ 0.42
TRIM3O75382 ARL16-209ENST00000573715 763 ntTSL 3 BASIC17.7■□□□□ 0.42
TRIM3O75382 ARL16-211ENST00000576135 694 ntTSL 3 BASIC17.7■□□□□ 0.42
TRIM3O75382 ZNF599-203ENST00000588760 948 ntTSL 2 BASIC17.7■□□□□ 0.42
TRIM3O75382 AC073912.3-201ENST00000624414 853 ntBASIC17.7■□□□□ 0.42
TRIM3O75382 LONP1-201ENST00000360614 3236 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
TRIM3O75382 GLB1-201ENST00000307363 2616 ntAPPRIS P4 TSL 1 (best) BASIC17.7■□□□□ 0.42
TRIM3O75382 TSPAN15-201ENST00000373290 1698 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
TRIM3O75382 PIGQ-204ENST00000409527 1915 ntAPPRIS P1 TSL 2 BASIC17.7■□□□□ 0.42
TRIM3O75382 AC129492.1-201ENST00000399413 1804 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
TRIM3O75382 ZNF346-209ENST00000512315 1575 ntTSL 2 BASIC17.7■□□□□ 0.42
TRIM3O75382 CELF6-202ENST00000395258 1741 ntTSL 5 BASIC17.69■□□□□ 0.42
TRIM3O75382 LRRC27-203ENST00000368613 2113 ntAPPRIS P3 TSL 1 (best) BASIC17.69■□□□□ 0.42
TRIM3O75382 ANKRD13D-216ENST00000514166 2138 ntTSL 2 BASIC17.69■□□□□ 0.42
TRIM3O75382 DBN1-210ENST00000512501 1878 ntTSL 3 BASIC17.69■□□□□ 0.42
TRIM3O75382 SMARCB1-204ENST00000407422 1643 ntAPPRIS ALT1 TSL 1 (best) BASIC17.69■□□□□ 0.42
TRIM3O75382 LRP8-204ENST00000371454 3322 ntAPPRIS ALT2 TSL 1 (best) BASIC17.69■□□□□ 0.42
TRIM3O75382 GPBAR1-202ENST00000519574 1382 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
TRIM3O75382 SLC7A10-201ENST00000253188 1946 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
TRIM3O75382 ACADVL-203ENST00000356839 2323 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
TRIM3O75382 HACE1-202ENST00000369125 3102 ntTSL 2 BASIC17.69■□□□□ 0.42
TRIM3O75382 SYDE2-202ENST00000341460 5512 ntAPPRIS P1 TSL 5 BASIC17.69■□□□□ 0.42
TRIM3O75382 COX7A1-201ENST00000292907 762 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
TRIM3O75382 DAB1-202ENST00000371230 1150 ntTSL 5 BASIC17.69■□□□□ 0.42
TRIM3O75382 MESTP1-201ENST00000404287 994 ntBASIC17.69■□□□□ 0.42
TRIM3O75382 CCDC124-201ENST00000445755 938 ntAPPRIS P1 TSL 2 BASIC17.69■□□□□ 0.42
TRIM3O75382 HIGD1A-204ENST00000452906 585 ntTSL 2 BASIC17.69■□□□□ 0.42
TRIM3O75382 PACRGL-207ENST00000502938 810 ntTSL 4 BASIC17.69■□□□□ 0.42
TRIM3O75382 SLC39A13-212ENST00000531974 856 ntTSL 2 BASIC17.69■□□□□ 0.42
TRIM3O75382 AMN1-211ENST00000541931 880 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
TRIM3O75382 CCDC124-203ENST00000597436 1055 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
TRIM3O75382 TPGS2-221ENST00000614939 1268 ntTSL 4 BASIC17.69■□□□□ 0.42
TRIM3O75382 CACNA1A-253ENST00000637927 6847 ntAPPRIS ALT2 TSL 5 BASIC17.69■□□□□ 0.42
TRIM3O75382 FIP1L1-203ENST00000358575 2180 ntAPPRIS P4 TSL 2 BASIC17.69■□□□□ 0.42
TRIM3O75382 ST3GAL3-219ENST00000372374 2170 ntTSL 5 BASIC17.69■□□□□ 0.42
TRIM3O75382 PDLIM2-205ENST00000397761 1491 ntAPPRIS P1 TSL 5 BASIC17.69■□□□□ 0.42
TRIM3O75382 MRC2-201ENST00000303375 5988 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
TRIM3O75382 CHST11-201ENST00000303694 5709 ntAPPRIS P3 TSL 1 (best) BASIC17.69■□□□□ 0.42
TRIM3O75382 PCCA-203ENST00000376286 2481 ntTSL 2 BASIC17.69■□□□□ 0.42
TRIM3O75382 MEN1-206ENST00000377321 2614 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
TRIM3O75382 TREX1-205ENST00000625293 1783 ntBASIC17.68■□□□□ 0.42
Retrieved 100 of 98,524 protein–RNA pairs in 29.5 ms