Protein–RNA interactions for Protein: O15516

CLOCK, Circadian locomoter output cycles protein kaput, humanhuman

Predictions only

Length 846 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLOCKO15516 FTCDNL1-202ENST00000420128 1021 ntTSL 5 BASIC18.04■□□□□ 0.48
CLOCKO15516 AC073210.2-201ENST00000430369 194 ntBASIC18.04■□□□□ 0.48
CLOCKO15516 FADS3-204ENST00000525588 1254 ntTSL 5 BASIC18.04■□□□□ 0.48
CLOCKO15516 ISCU-212ENST00000547005 795 ntTSL 3 BASIC18.04■□□□□ 0.48
CLOCKO15516 AC105020.6-201ENST00000621523 1217 ntBASIC18.04■□□□□ 0.48
CLOCKO15516 MARS-234ENST00000630571 216 ntTSL 5 BASIC18.04■□□□□ 0.48
CLOCKO15516 MARS-235ENST00000630803 183 ntTSL 3 BASIC18.04■□□□□ 0.48
CLOCKO15516 TMEM191A-211ENST00000637163 1067 ntBASIC18.04■□□□□ 0.48
CLOCKO15516 AC068987.5-201ENST00000642069 987 ntAPPRIS P1 BASIC18.04■□□□□ 0.48
CLOCKO15516 PGRMC2-208ENST00000613358 3783 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
CLOCKO15516 CD177-203ENST00000618265 2222 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
CLOCKO15516 ZNF74-201ENST00000357502 2788 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
CLOCKO15516 ZNF394-201ENST00000337673 2179 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
CLOCKO15516 BANP-202ENST00000355022 2164 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
CLOCKO15516 AL512353.2-201ENST00000448759 1962 ntBASIC18.04■□□□□ 0.48
CLOCKO15516 EIF4G3-214ENST00000634879 5325 ntTSL 5 BASIC18.04■□□□□ 0.48
CLOCKO15516 GPRC5C-205ENST00000481232 1592 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
CLOCKO15516 NCAN-201ENST00000252575 6387 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
CLOCKO15516 TRA2A-211ENST00000538367 2142 ntAPPRIS ALT2 TSL 2 BASIC18.04■□□□□ 0.48
CLOCKO15516 LRRC32-202ENST00000404995 2656 ntAPPRIS P1 TSL 5 BASIC18.04■□□□□ 0.48
CLOCKO15516 KLHDC4-201ENST00000270583 1886 ntAPPRIS P3 TSL 1 (best) BASIC18.03■□□□□ 0.48
CLOCKO15516 LRP1-204ENST00000553277 1693 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
CLOCKO15516 FER1L4-211ENST00000616283 1818 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
CLOCKO15516 VSTM2B-201ENST00000335523 1488 ntAPPRIS P1 TSL 5 BASIC18.03■□□□□ 0.48
CLOCKO15516 NPDC1-202ENST00000371601 1494 ntAPPRIS P2 TSL 1 (best) BASIC18.03■□□□□ 0.48
CLOCKO15516 TP53I3-202ENST00000335934 1635 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
CLOCKO15516 TMEM263-204ENST00000548125 3349 ntAPPRIS P1 TSL 2 BASIC18.03■□□□□ 0.48
CLOCKO15516 C16orf74-201ENST00000284245 906 ntAPPRIS P2 TSL 1 (best) BASIC18.03■□□□□ 0.48
CLOCKO15516 TRAPPC5-201ENST00000317378 790 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
CLOCKO15516 SDHC-201ENST00000342751 1127 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
CLOCKO15516 KRT18P68-201ENST00000392293 1000 ntBASIC18.03■□□□□ 0.48
CLOCKO15516 PPP1R14BP2-201ENST00000426284 444 ntBASIC18.03■□□□□ 0.48
CLOCKO15516 CD99P1-203ENST00000431582 602 ntTSL 4 BASIC18.03■□□□□ 0.48
CLOCKO15516 RNA5SP413-201ENST00000516373 109 ntBASIC18.03■□□□□ 0.48
CLOCKO15516 LYRM1-205ENST00000562740 931 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
CLOCKO15516 RPS15-206ENST00000589656 473 ntAPPRIS ALT1 TSL 5 BASIC18.03■□□□□ 0.48
CLOCKO15516 TBCB-214ENST00000629269 413 ntTSL 5 BASIC18.03■□□□□ 0.48
CLOCKO15516 MEPCE-202ENST00000414441 2261 ntTSL 2 BASIC18.03■□□□□ 0.48
CLOCKO15516 GSEC-201ENST00000626810 2289 ntTSL 2 BASIC18.03■□□□□ 0.48
CLOCKO15516 MTX1-201ENST00000316721 1441 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
CLOCKO15516 GPR142-201ENST00000335666 1437 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
CLOCKO15516 AC011944.1-201ENST00000316148 1900 ntTSL 2 BASIC18.03■□□□□ 0.48
CLOCKO15516 FBXL22-202ENST00000534939 2443 ntAPPRIS ALT2 TSL 3 BASIC18.03■□□□□ 0.48
CLOCKO15516 NOMO3-201ENST00000263012 3911 ntAPPRIS ALT2 TSL 1 (best) BASIC18.03■□□□□ 0.48
CLOCKO15516 DGKI-203ENST00000446122 4070 ntAPPRIS ALT2 TSL 5 BASIC18.03■□□□□ 0.48
CLOCKO15516 EPOR-208ENST00000592375 2086 ntTSL 2 BASIC18.03■□□□□ 0.48
CLOCKO15516 SDC2-202ENST00000518385 1583 ntTSL 5 BASIC18.03■□□□□ 0.48
CLOCKO15516 RBCK1-203ENST00000382181 2208 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
CLOCKO15516 APP-202ENST00000348990 3355 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
CLOCKO15516 ZNF815P-204ENST00000434898 1737 ntBASIC18.03■□□□□ 0.48
CLOCKO15516 EDA-203ENST00000374552 5278 ntAPPRIS P3 TSL 1 (best) BASIC18.03■□□□□ 0.48
CLOCKO15516 GCK-205ENST00000437084 1385 ntTSL 5 BASIC18.03■□□□□ 0.48
CLOCKO15516 KRT6A-201ENST00000330722 2310 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
CLOCKO15516 CORO6-210ENST00000580212 2345 ntTSL 5 BASIC18.03■□□□□ 0.48
CLOCKO15516 E2F2-201ENST00000361729 5191 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
CLOCKO15516 FAM3A-201ENST00000322269 1815 ntTSL 5 BASIC18.02■□□□□ 0.48
CLOCKO15516 ADCY8-201ENST00000286355 5938 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
CLOCKO15516 SIX5-203ENST00000560168 1975 ntTSL 4 BASIC18.02■□□□□ 0.48
CLOCKO15516 RAVER1-207ENST00000615032 1952 ntAPPRIS ALT2 TSL 5 BASIC18.02■□□□□ 0.48
CLOCKO15516 MATN4-203ENST00000372754 2200 ntAPPRIS ALT2 TSL 5 BASIC18.02■□□□□ 0.48
CLOCKO15516 APH1A-202ENST00000360244 2353 ntAPPRIS ALT1 TSL 1 (best) BASIC18.02■□□□□ 0.48
CLOCKO15516 PCDHA13-201ENST00000289272 5260 ntAPPRIS P2 TSL 1 (best) BASIC18.02■□□□□ 0.48
CLOCKO15516 IGSF9-206ENST00000611023 2663 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
CLOCKO15516 KANSL1L-203ENST00000418791 3562 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
CLOCKO15516 LTBP4-203ENST00000308370 4948 ntAPPRIS P4 TSL 1 (best) BASIC18.02■□□□□ 0.48
CLOCKO15516 GDF15-201ENST00000252809 1200 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
CLOCKO15516 AC114490.1-202ENST00000311990 1887 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
CLOCKO15516 IDH3G-202ENST00000370092 1712 ntTSL 5 BASIC18.02■□□□□ 0.48
CLOCKO15516 EMC6-202ENST00000397133 762 ntAPPRIS P1 TSL 2 BASIC18.02■□□□□ 0.48
CLOCKO15516 ZNF295-AS1-201ENST00000412906 952 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
CLOCKO15516 MRPL23-AS1-201ENST00000419080 1876 ntTSL 3 BASIC18.02■□□□□ 0.48
CLOCKO15516 LINC01637-201ENST00000444039 684 ntTSL 2 BASIC18.02■□□□□ 0.48
CLOCKO15516 FAM201B-201ENST00000458407 597 ntBASIC18.02■□□□□ 0.48
CLOCKO15516 FAM53A-207ENST00000489363 2776 ntTSL 2 BASIC18.02■□□□□ 0.48
CLOCKO15516 DNAJA4-210ENST00000489435 947 ntTSL 3 BASIC18.02■□□□□ 0.48
CLOCKO15516 AC023632.3-201ENST00000521633 145 ntBASIC18.02■□□□□ 0.48
CLOCKO15516 AP000785.1-201ENST00000527314 613 ntTSL 4 BASIC18.02■□□□□ 0.48
CLOCKO15516 AC022509.3-202ENST00000545819 566 ntTSL 3 BASIC18.02■□□□□ 0.48
CLOCKO15516 SOCS2-210ENST00000551556 1716 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
CLOCKO15516 MIR4651-201ENST00000582622 73 ntBASIC18.02■□□□□ 0.48
CLOCKO15516 CYP2T3P-201ENST00000601990 817 ntBASIC18.02■□□□□ 0.48
CLOCKO15516 AC004982.2-201ENST00000609497 1578 ntTSL 2 BASIC18.02■□□□□ 0.48
CLOCKO15516 TPST2-201ENST00000338754 5697 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
CLOCKO15516 SLC43A1-201ENST00000278426 2598 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
CLOCKO15516 ENTPD2-201ENST00000312665 1500 ntTSL 1 (best) BASIC18.02■□□□□ 0.47
CLOCKO15516 ANKRD13B-209ENST00000614878 2670 ntAPPRIS P1 TSL 5 BASIC18.02■□□□□ 0.47
CLOCKO15516 ZBTB16-201ENST00000335953 2523 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
CLOCKO15516 CNTNAP3-204ENST00000377656 4986 ntTSL 1 (best) BASIC18.02■□□□□ 0.47
CLOCKO15516 NPEPL1-203ENST00000525817 1780 ntTSL 2 BASIC18.02■□□□□ 0.47
CLOCKO15516 B4GALT2-202ENST00000356836 2629 ntAPPRIS P1 TSL 2 BASIC18.02■□□□□ 0.47
CLOCKO15516 AC018553.1-201ENST00000616682 1458 ntBASIC18.01■□□□□ 0.47
CLOCKO15516 PCBP3-205ENST00000400310 2168 ntTSL 2 BASIC18.01■□□□□ 0.47
CLOCKO15516 MARC2-201ENST00000359316 1335 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
CLOCKO15516 CD55-206ENST00000391921 2433 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
CLOCKO15516 MMD2-202ENST00000404774 2415 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
CLOCKO15516 UBL4A-202ENST00000369660 2382 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
CLOCKO15516 SEPT2-245ENST00000616972 3446 ntTSL 2 BASIC18.01■□□□□ 0.47
CLOCKO15516 STAG3L3-201ENST00000423834 1262 ntTSL 2 BASIC18.01■□□□□ 0.47
CLOCKO15516 AL391244.2-201ENST00000428932 543 ntTSL 2 BASIC18.01■□□□□ 0.47
CLOCKO15516 AP000282.1-201ENST00000454622 682 ntTSL 2 BASIC18.01■□□□□ 0.47
Retrieved 100 of 98,524 protein–RNA pairs in 20.7 ms