Protein–RNA interactions for Protein: A0A539

TCRBV7S3A2, T-cell receptor beta variable 4-2 (Fragment), humanhuman

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TCRBV7S3A2A0A539 MTSS1-203ENST00000431961 1711 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
TCRBV7S3A2A0A539 AKR1A1-201ENST00000351829 1166 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
TCRBV7S3A2A0A539 MPV17L-202ENST00000396385 1037 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
TCRBV7S3A2A0A539 COQ10B-203ENST00000409398 879 ntTSL 3 BASIC19.35■□□□□ 0.69
TCRBV7S3A2A0A539 KRT17P3-201ENST00000420566 1262 ntBASIC19.35■□□□□ 0.69
TCRBV7S3A2A0A539 METTL21A-204ENST00000425132 869 ntTSL 2 BASIC19.35■□□□□ 0.69
TCRBV7S3A2A0A539 PDE6B-202ENST00000429163 2120 ntTSL 2 BASIC19.35■□□□□ 0.69
TCRBV7S3A2A0A539 CCDC124-201ENST00000445755 938 ntAPPRIS P1 TSL 2 BASIC19.35■□□□□ 0.69
TCRBV7S3A2A0A539 AC137630.1-201ENST00000452042 782 ntTSL 4 BASIC19.35■□□□□ 0.69
TCRBV7S3A2A0A539 BAALC-AS1-206ENST00000521383 736 ntTSL 3 BASIC19.35■□□□□ 0.69
TCRBV7S3A2A0A539 ZNF667-AS1-206ENST00000591797 535 ntTSL 5 BASIC19.35■□□□□ 0.69
TCRBV7S3A2A0A539 CCDC124-203ENST00000597436 1055 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
TCRBV7S3A2A0A539 AL158152.2-201ENST00000602703 235 ntTSL 3 BASIC19.35■□□□□ 0.69
TCRBV7S3A2A0A539 AC004264.1-201ENST00000608354 794 ntBASIC19.35■□□□□ 0.69
TCRBV7S3A2A0A539 CORO1B-210ENST00000627576 960 ntTSL 5 BASIC19.35■□□□□ 0.69
TCRBV7S3A2A0A539 UBE2E3-209ENST00000602710 1556 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
TCRBV7S3A2A0A539 PKMYT1-203ENST00000431515 2308 ntTSL 2 BASIC19.35■□□□□ 0.69
TCRBV7S3A2A0A539 PLAUR-203ENST00000340093 1548 ntAPPRIS P3 TSL 1 (best) BASIC19.35■□□□□ 0.69
TCRBV7S3A2A0A539 PSTPIP1-203ENST00000558012 1896 ntAPPRIS P2 TSL 1 (best) BASIC19.35■□□□□ 0.69
TCRBV7S3A2A0A539 EWSR1-207ENST00000406548 2207 ntAPPRIS ALT2 TSL 1 (best) BASIC19.35■□□□□ 0.69
TCRBV7S3A2A0A539 HYOU1-212ENST00000532519 2162 ntTSL 5 BASIC19.34■□□□□ 0.69
TCRBV7S3A2A0A539 LAMC3-202ENST00000361069 6133 ntAPPRIS P1 TSL 2 BASIC19.34■□□□□ 0.69
TCRBV7S3A2A0A539 PCSK5-202ENST00000376767 2845 ntTSL 2 BASIC19.34■□□□□ 0.69
TCRBV7S3A2A0A539 ACAP3-202ENST00000354700 3896 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
TCRBV7S3A2A0A539 BMP2K-208ENST00000628286 3848 ntAPPRIS ALT2 TSL 5 BASIC19.34■□□□□ 0.69
TCRBV7S3A2A0A539 ST3GAL4-203ENST00000392669 1724 ntAPPRIS ALT1 TSL 1 (best) BASIC19.34■□□□□ 0.69
TCRBV7S3A2A0A539 CEMP1-202ENST00000567119 1374 ntAPPRIS P2 BASIC19.34■□□□□ 0.69
TCRBV7S3A2A0A539 DHRS12-201ENST00000218981 1970 ntTSL 2 BASIC19.34■□□□□ 0.69
TCRBV7S3A2A0A539 NAF1-202ENST00000422287 1604 ntAPPRIS ALT2 TSL 1 (best) BASIC19.34■□□□□ 0.69
TCRBV7S3A2A0A539 C15orf48-201ENST00000344300 875 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
TCRBV7S3A2A0A539 NDUFA8-201ENST00000373768 844 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
TCRBV7S3A2A0A539 C5orf56-203ENST00000378953 942 ntAPPRIS ALT2 TSL 2 BASIC19.34■□□□□ 0.69
TCRBV7S3A2A0A539 KRASP1-201ENST00000407852 552 ntBASIC19.34■□□□□ 0.69
TCRBV7S3A2A0A539 DYNLT3-203ENST00000432389 719 ntTSL 5 BASIC19.34■□□□□ 0.69
TCRBV7S3A2A0A539 LINC00636-201ENST00000494231 1264 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
TCRBV7S3A2A0A539 MMAB-206ENST00000540016 945 ntTSL 3 BASIC19.34■□□□□ 0.69
TCRBV7S3A2A0A539 ELAC1-203ENST00000588577 694 ntTSL 2 BASIC19.34■□□□□ 0.69
TCRBV7S3A2A0A539 MTFP1-206ENST00000629597 482 ntTSL 5 BASIC19.34■□□□□ 0.69
TCRBV7S3A2A0A539 NES-201ENST00000368223 5558 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
TCRBV7S3A2A0A539 TH-202ENST00000333684 1535 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
TCRBV7S3A2A0A539 KRBOX1-AS1-201ENST00000447834 2134 ntTSL 2 BASIC19.34■□□□□ 0.69
TCRBV7S3A2A0A539 SAMD11-210ENST00000616016 2391 ntTSL 5 BASIC19.34■□□□□ 0.69
TCRBV7S3A2A0A539 SAMD11-215ENST00000618779 2368 ntAPPRIS ALT2 TSL 5 BASIC19.34■□□□□ 0.69
TCRBV7S3A2A0A539 ZNF395-211ENST00000523202 2068 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
TCRBV7S3A2A0A539 CLEC10A-201ENST00000254868 1797 ntAPPRIS P3 TSL 1 (best) BASIC19.34■□□□□ 0.69
TCRBV7S3A2A0A539 PFN2-203ENST00000452853 1780 ntAPPRIS ALT1 TSL 1 (best) BASIC19.34■□□□□ 0.69
TCRBV7S3A2A0A539 TCP11-201ENST00000244645 2018 ntAPPRIS P3 TSL 1 (best) BASIC19.34■□□□□ 0.69
TCRBV7S3A2A0A539 MEF2B-204ENST00000424583 1405 ntAPPRIS P1 TSL 5 BASIC19.34■□□□□ 0.69
TCRBV7S3A2A0A539 BTNL9-210ENST00000515271 1444 ntTSL 2 BASIC19.34■□□□□ 0.69
TCRBV7S3A2A0A539 SLC47A2-201ENST00000325411 2258 ntAPPRIS P3 TSL 1 (best) BASIC19.34■□□□□ 0.69
TCRBV7S3A2A0A539 PLIN2-201ENST00000276914 1972 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
TCRBV7S3A2A0A539 GATAD1-201ENST00000287957 3361 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
TCRBV7S3A2A0A539 CHRAC1-201ENST00000220913 2488 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
TCRBV7S3A2A0A539 COBL-210ENST00000632460 1941 ntTSL 5 BASIC19.33■□□□□ 0.69
TCRBV7S3A2A0A539 IFFO1-204ENST00000396840 2677 ntAPPRIS ALT1 TSL 5 BASIC19.33■□□□□ 0.69
TCRBV7S3A2A0A539 KIFC3-201ENST00000379655 3427 ntAPPRIS P3 TSL 1 (best) BASIC19.33■□□□□ 0.69
TCRBV7S3A2A0A539 STOML1-209ENST00000564777 1849 ntTSL 1 (best) BASIC19.33■□□□□ 0.69
TCRBV7S3A2A0A539 PMAIP1-201ENST00000269518 1262 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
TCRBV7S3A2A0A539 SPSB1-203ENST00000377399 1007 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
TCRBV7S3A2A0A539 RGCC-201ENST00000379359 960 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
TCRBV7S3A2A0A539 SERF2-207ENST00000409614 582 ntTSL 2 BASIC19.33■□□□□ 0.68
TCRBV7S3A2A0A539 NELFE-206ENST00000444811 1202 ntAPPRIS ALT2 TSL 2 BASIC19.33■□□□□ 0.68
TCRBV7S3A2A0A539 Z85996.1-201ENST00000494644 937 ntBASIC19.33■□□□□ 0.68
TCRBV7S3A2A0A539 B3GAT3-205ENST00000534026 1120 ntTSL 2 BASIC19.33■□□□□ 0.68
TCRBV7S3A2A0A539 MIR381HG-201ENST00000553692 425 ntTSL 3 BASIC19.33■□□□□ 0.68
TCRBV7S3A2A0A539 TMEM191B-203ENST00000613597 366 ntAPPRIS ALT2 TSL 5 BASIC19.33■□□□□ 0.68
TCRBV7S3A2A0A539 FUCA1-201ENST00000374479 2047 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
TCRBV7S3A2A0A539 AL390961.4-201ENST00000623958 2535 ntBASIC19.33■□□□□ 0.68
TCRBV7S3A2A0A539 GUCY1A2-201ENST00000282249 3047 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
TCRBV7S3A2A0A539 NCK1-207ENST00000481752 1971 ntAPPRIS P1 TSL 5 BASIC19.33■□□□□ 0.68
TCRBV7S3A2A0A539 SPAG1-206ENST00000520643 1723 ntTSL 2 BASIC19.33■□□□□ 0.68
TCRBV7S3A2A0A539 C19orf66-209ENST00000591813 1481 ntAPPRIS ALT2 TSL 1 (best) BASIC19.33■□□□□ 0.68
TCRBV7S3A2A0A539 ACTR3B-203ENST00000397282 1692 ntTSL 2 BASIC19.33■□□□□ 0.68
TCRBV7S3A2A0A539 KRT6A-201ENST00000330722 2310 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
TCRBV7S3A2A0A539 MFSD1-201ENST00000264266 1594 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
TCRBV7S3A2A0A539 B4GALT4-202ENST00000393765 2459 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
TCRBV7S3A2A0A539 MFSD10-202ENST00000355443 1753 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
TCRBV7S3A2A0A539 RASEF-202ENST00000376447 5576 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
TCRBV7S3A2A0A539 CXXC4-201ENST00000394767 5565 ntAPPRIS P1 TSL 5 BASIC19.32■□□□□ 0.68
TCRBV7S3A2A0A539 CPZ-201ENST00000315782 2136 ntAPPRIS P3 TSL 1 (best) BASIC19.32■□□□□ 0.68
TCRBV7S3A2A0A539 TMEM9-209ENST00000485839 938 ntAPPRIS P3 TSL 2 BASIC19.32■□□□□ 0.68
TCRBV7S3A2A0A539 MFSD4A-206ENST00000489709 1136 ntTSL 5 BASIC19.32■□□□□ 0.68
TCRBV7S3A2A0A539 AL162258.1-201ENST00000497086 753 ntTSL 2 BASIC19.32■□□□□ 0.68
TCRBV7S3A2A0A539 KRT8-216ENST00000552551 2126 ntAPPRIS P1 TSL 2 BASIC19.32■□□□□ 0.68
TCRBV7S3A2A0A539 AATF-208ENST00000619387 2141 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
TCRBV7S3A2A0A539 CROCCP4-202ENST00000633627 573 ntTSL 3 BASIC19.32■□□□□ 0.68
TCRBV7S3A2A0A539 BMP1-202ENST00000306385 4229 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
TCRBV7S3A2A0A539 FST-201ENST00000256759 2519 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
TCRBV7S3A2A0A539 ZNF787-202ENST00000587279 1657 ntTSL 2 BASIC19.32■□□□□ 0.68
TCRBV7S3A2A0A539 SNAI3-AS1-205ENST00000568633 2096 ntBASIC19.32■□□□□ 0.68
TCRBV7S3A2A0A539 HOXC13-AS-201ENST00000512916 1408 ntTSL 3 BASIC19.32■□□□□ 0.68
TCRBV7S3A2A0A539 ACSF2-201ENST00000300441 2235 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
TCRBV7S3A2A0A539 MCCC1-214ENST00000610757 2410 ntTSL 5 BASIC19.32■□□□□ 0.68
TCRBV7S3A2A0A539 URI1-202ENST00000392271 3444 ntAPPRIS P3 TSL 1 (best) BASIC19.32■□□□□ 0.68
TCRBV7S3A2A0A539 TSR1-201ENST00000301364 5188 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
TCRBV7S3A2A0A539 STRADB-202ENST00000392249 2190 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
TCRBV7S3A2A0A539 BICD1-207ENST00000551848 1962 ntBASIC19.32■□□□□ 0.68
TCRBV7S3A2A0A539 THOC6-209ENST00000575576 1360 ntTSL 5 BASIC19.32■□□□□ 0.68
TCRBV7S3A2A0A539 AC018470.1-201ENST00000624790 3129 ntBASIC19.31■□□□□ 0.68
TCRBV7S3A2A0A539 PJA1-202ENST00000374571 2672 ntAPPRIS ALT2 TSL 1 (best) BASIC19.31■□□□□ 0.68
Retrieved 100 of 98,524 protein–RNA pairs in 21.2 ms