Protein–RNA interactions for Protein: A0A1W2PRF3

Uncharacterized protein, humanhuman

Predictions only

Length 423 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
A0A1W2PRF3 TSHZ3-201ENST00000240587 5176 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
A0A1W2PRF3 CLIP3-206ENST00000593074 2080 ntAPPRIS P1 TSL 2 BASIC15.63■□□□□ 0.09
A0A1W2PRF3 CDK13-207ENST00000613626 3099 ntTSL 5 BASIC15.63■□□□□ 0.09
A0A1W2PRF3 SMARCC2-203ENST00000394023 4271 ntAPPRIS ALT2 TSL 1 (best) BASIC15.63■□□□□ 0.09
A0A1W2PRF3 MICU3-201ENST00000318063 3992 ntAPPRIS P2 TSL 1 (best) BASIC15.63■□□□□ 0.09
A0A1W2PRF3 SEMA3C-201ENST00000265361 5174 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
A0A1W2PRF3 PRR31-201ENST00000371629 978 ntTSL 2 BASIC15.63■□□□□ 0.09
A0A1W2PRF3 TRAPPC3-204ENST00000373166 1265 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
A0A1W2PRF3 SPSB1-203ENST00000377399 1007 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
A0A1W2PRF3 AL731557.1-201ENST00000425264 744 ntTSL 3 BASIC15.63■□□□□ 0.09
A0A1W2PRF3 UNC5B-AS1-201ENST00000447119 647 ntTSL 2 BASIC15.63■□□□□ 0.09
A0A1W2PRF3 AL365259.1-203ENST00000451660 707 ntTSL 3 BASIC15.63■□□□□ 0.09
A0A1W2PRF3 AC091153.3-201ENST00000497885 472 ntTSL 2 BASIC15.63■□□□□ 0.09
A0A1W2PRF3 CXXC5-AS1-201ENST00000514287 577 ntTSL 4 BASIC15.63■□□□□ 0.09
A0A1W2PRF3 SIVA1-207ENST00000556195 674 ntTSL 3 BASIC15.63■□□□□ 0.09
A0A1W2PRF3 AC010531.1-201ENST00000568879 953 ntAPPRIS P1 TSL 4 BASIC15.63■□□□□ 0.09
A0A1W2PRF3 GLDC-219ENST00000640208 420 ntTSL 2 BASIC15.63■□□□□ 0.09
A0A1W2PRF3 TSC22D4-202ENST00000393991 1469 ntTSL 2 BASIC15.63■□□□□ 0.09
A0A1W2PRF3 ZNF398-202ENST00000475153 2860 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
A0A1W2PRF3 TMC6-201ENST00000306591 1681 ntTSL 5 BASIC15.63■□□□□ 0.09
A0A1W2PRF3 TOM1L1-202ENST00000445275 2228 ntTSL 2 BASIC15.63■□□□□ 0.09
A0A1W2PRF3 SUMF2-202ENST00000342190 1876 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
A0A1W2PRF3 SEC11C-202ENST00000509791 2054 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
A0A1W2PRF3 FARSA-207ENST00000588025 2057 ntTSL 5 BASIC15.63■□□□□ 0.09
A0A1W2PRF3 COL13A1-201ENST00000354547 3027 ntAPPRIS ALT2 TSL 5 BASIC15.62■□□□□ 0.09
A0A1W2PRF3 BEST2-201ENST00000042931 1908 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
A0A1W2PRF3 EDA-208ENST00000524573 1381 ntAPPRIS ALT1 TSL 1 (best) BASIC15.62■□□□□ 0.09
A0A1W2PRF3 GTPBP3-222ENST00000600625 2493 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
A0A1W2PRF3 CPAMD8-203ENST00000443236 5992 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
A0A1W2PRF3 SLC25A39-202ENST00000377095 1565 ntAPPRIS ALT1 TSL 1 (best) BASIC15.62■□□□□ 0.09
A0A1W2PRF3 LRP4-201ENST00000378623 8076 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
A0A1W2PRF3 SET-201ENST00000322030 2915 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
A0A1W2PRF3 KIAA1522-202ENST00000373480 5294 ntAPPRIS ALT2 TSL 1 (best) BASIC15.62■□□□□ 0.09
A0A1W2PRF3 KIAA1522-203ENST00000373481 5293 ntAPPRIS ALT2 TSL 2 BASIC15.62■□□□□ 0.09
A0A1W2PRF3 RUVBL2-206ENST00000595090 2009 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
A0A1W2PRF3 HIST1H2APS4-201ENST00000362070 348 ntBASIC15.62■□□□□ 0.09
A0A1W2PRF3 ADGRD1-AS1-202ENST00000542980 1277 ntTSL 4 BASIC15.62■□□□□ 0.09
A0A1W2PRF3 SIGLEC15-202ENST00000546268 1054 ntTSL 2 BASIC15.62■□□□□ 0.09
A0A1W2PRF3 FAM181A-203ENST00000556222 1162 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
A0A1W2PRF3 KANSL1-AS1-203ENST00000572973 424 ntTSL 3 BASIC15.62■□□□□ 0.09
A0A1W2PRF3 AQP4-AS1-204ENST00000582605 525 ntTSL 4 BASIC15.62■□□□□ 0.09
A0A1W2PRF3 DGCR10-201ENST00000609839 495 ntBASIC15.62■□□□□ 0.09
A0A1W2PRF3 AC010947.1-201ENST00000623454 693 ntBASIC15.62■□□□□ 0.09
A0A1W2PRF3 RPS27A-211ENST00000639844 606 ntTSL 5 BASIC15.62■□□□□ 0.09
A0A1W2PRF3 ZIC4-209ENST00000473123 1481 ntAPPRIS P1 TSL 2 BASIC15.62■□□□□ 0.09
A0A1W2PRF3 ANKRD29-201ENST00000322980 1658 ntTSL 2 BASIC15.62■□□□□ 0.09
A0A1W2PRF3 HIKESHI-207ENST00000533986 1694 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
A0A1W2PRF3 ENOPH1-203ENST00000509635 1874 ntTSL 3 BASIC15.62■□□□□ 0.09
A0A1W2PRF3 CYP2A7-202ENST00000301146 2281 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
A0A1W2PRF3 RBM6-204ENST00000422955 2324 ntTSL 2 BASIC15.62■□□□□ 0.09
A0A1W2PRF3 HCK-207ENST00000520553 2101 ntAPPRIS ALT2 TSL 1 (best) BASIC15.62■□□□□ 0.09
A0A1W2PRF3 ALDH7A1-215ENST00000553117 1935 ntTSL 2 BASIC15.62■□□□□ 0.09
A0A1W2PRF3 GABBR1-202ENST00000376977 1739 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
A0A1W2PRF3 YPEL5-205ENST00000402708 1735 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
A0A1W2PRF3 CLSTN1-202ENST00000377298 5221 ntAPPRIS ALT2 TSL 1 (best) BASIC15.62■□□□□ 0.09
A0A1W2PRF3 TSPAN17-202ENST00000310032 2550 ntTSL 5 BASIC15.62■□□□□ 0.09
A0A1W2PRF3 PBX1-222ENST00000627490 1769 ntTSL 2 BASIC15.62■□□□□ 0.09
A0A1W2PRF3 AC008691.1-203ENST00000515337 1580 ntTSL 2 BASIC15.62■□□□□ 0.09
A0A1W2PRF3 REPS2-201ENST00000303843 7771 ntAPPRIS ALT2 TSL 1 (best) BASIC15.61■□□□□ 0.09
A0A1W2PRF3 RCCD1-201ENST00000394258 2689 ntAPPRIS P2 TSL 1 (best) BASIC15.61■□□□□ 0.09
A0A1W2PRF3 PLBD2-201ENST00000280800 4800 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
A0A1W2PRF3 KRT1-201ENST00000252244 2451 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
A0A1W2PRF3 MRGPRF-201ENST00000309099 2295 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
A0A1W2PRF3 MAFG-AS1-201ENST00000582106 1895 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
A0A1W2PRF3 SEL1L3-202ENST00000399878 4520 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
A0A1W2PRF3 KRT18-207ENST00000550600 1696 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
A0A1W2PRF3 DENND2A-201ENST00000275884 3735 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
A0A1W2PRF3 INSM1-201ENST00000310227 2829 ntAPPRIS P1 BASIC15.61■□□□□ 0.09
A0A1W2PRF3 NEIL3-201ENST00000264596 2408 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
A0A1W2PRF3 FAM182B-202ENST00000376404 456 ntAPPRIS ALT2 BASIC15.61■□□□□ 0.09
A0A1W2PRF3 ZNF534-203ENST00000432303 956 ntTSL 2 BASIC15.61■□□□□ 0.09
A0A1W2PRF3 FAM86C2P-201ENST00000525180 435 ntTSL 4 BASIC15.61■□□□□ 0.09
A0A1W2PRF3 AC006942.1-201ENST00000600669 520 ntTSL 2 BASIC15.61■□□□□ 0.09
A0A1W2PRF3 SMN1-211ENST00000625245 885 ntAPPRIS ALT2 TSL 5 BASIC15.61■□□□□ 0.09
A0A1W2PRF3 SMN2-215ENST00000628696 885 ntAPPRIS ALT2 TSL 5 BASIC15.61■□□□□ 0.09
A0A1W2PRF3 SPOCK3-215ENST00000510741 1963 ntAPPRIS ALT2 TSL 5 BASIC15.61■□□□□ 0.09
A0A1W2PRF3 SELENOF-207ENST00000611507 1785 ntTSL 5 BASIC15.61■□□□□ 0.09
A0A1W2PRF3 FAM216A-201ENST00000377673 1582 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
A0A1W2PRF3 TSG101-201ENST00000251968 1824 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
A0A1W2PRF3 RUNX2-202ENST00000371432 5487 ntAPPRIS ALT2 TSL 5 BASIC15.61■□□□□ 0.09
A0A1W2PRF3 PDLIM2-204ENST00000397760 1847 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
A0A1W2PRF3 E4F1-201ENST00000301727 2573 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
A0A1W2PRF3 ATXN2-227ENST00000616825 4575 ntAPPRIS ALT2 TSL 5 BASIC15.61■□□□□ 0.09
A0A1W2PRF3 FAM46B-201ENST00000289166 2368 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
A0A1W2PRF3 TP73-202ENST00000354437 2140 ntTSL 5 BASIC15.61■□□□□ 0.09
A0A1W2PRF3 UBL4A-202ENST00000369660 2382 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
A0A1W2PRF3 SCO1-203ENST00000577427 1601 ntTSL 3 BASIC15.61■□□□□ 0.09
A0A1W2PRF3 SPHK1-207ENST00000590959 1851 ntAPPRIS ALT2 TSL 1 (best) BASIC15.61■□□□□ 0.09
A0A1W2PRF3 Z82202.1-201ENST00000623446 1880 ntBASIC15.61■□□□□ 0.09
A0A1W2PRF3 AC126773.2-201ENST00000562172 1682 ntTSL 3 BASIC15.6■□□□□ 0.09
A0A1W2PRF3 BAZ1B-201ENST00000339594 6102 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
A0A1W2PRF3 SLC11A2-208ENST00000546743 1740 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
A0A1W2PRF3 PAQR4-203ENST00000572687 2251 ntTSL 2 BASIC15.6■□□□□ 0.09
A0A1W2PRF3 PLCG1-201ENST00000244007 5285 ntAPPRIS P4 TSL 5 BASIC15.6■□□□□ 0.09
A0A1W2PRF3 SLC22A18-202ENST00000347936 1542 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
A0A1W2PRF3 PSMD8-210ENST00000620216 1538 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
A0A1W2PRF3 ADAP2-201ENST00000330889 2934 ntAPPRIS P2 TSL 1 (best) BASIC15.6■□□□□ 0.09
A0A1W2PRF3 C14orf79-202ENST00000547315 2370 ntAPPRIS P2 TSL 1 (best) BASIC15.6■□□□□ 0.09
A0A1W2PRF3 TRIM33-201ENST00000358465 8339 ntAPPRIS P4 TSL 1 (best) BASIC15.6■□□□□ 0.09
A0A1W2PRF3 KRAS-201ENST00000256078 1119 ntAPPRIS P4 TSL 1 (best) BASIC15.6■□□□□ 0.09
Retrieved 100 of 98,524 protein–RNA pairs in 31.5 ms