Protein–RNA interactions for Protein: A0A0A0MS04

TRBV6-7, T-cell receptor beta variable 6-7 (non-functional) (Fragment), humanhuman

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRBV6-7A0A0A0MS04 AL512353.2-201ENST00000448759 1962 ntBASIC15.92■□□□□ 0.14
TRBV6-7A0A0A0MS04 HNRNPD-201ENST00000313899 3033 ntAPPRIS P4 TSL 1 (best) BASIC15.92■□□□□ 0.14
TRBV6-7A0A0A0MS04 FZD10-202ENST00000539839 3282 ntBASIC15.92■□□□□ 0.14
TRBV6-7A0A0A0MS04 CCDC106-201ENST00000308964 1546 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
TRBV6-7A0A0A0MS04 AL390860.1-201ENST00000449298 1541 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
TRBV6-7A0A0A0MS04 TCTN1-223ENST00000550703 2149 ntTSL 2 BASIC15.92■□□□□ 0.14
TRBV6-7A0A0A0MS04 TMEM263-204ENST00000548125 3349 ntAPPRIS P1 TSL 2 BASIC15.92■□□□□ 0.14
TRBV6-7A0A0A0MS04 GOSR2-226ENST00000639287 2367 ntTSL 5 BASIC15.92■□□□□ 0.14
TRBV6-7A0A0A0MS04 JAKMIP1-202ENST00000409021 2975 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
TRBV6-7A0A0A0MS04 SLC1A5-205ENST00000594991 2031 ntTSL 2 BASIC15.92■□□□□ 0.14
TRBV6-7A0A0A0MS04 CD55-206ENST00000391921 2433 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
TRBV6-7A0A0A0MS04 B3GNT9-201ENST00000449549 2917 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
TRBV6-7A0A0A0MS04 NFKBIZ-201ENST00000326151 2058 ntTSL 2 BASIC15.91■□□□□ 0.14
TRBV6-7A0A0A0MS04 PCSK5-202ENST00000376767 2845 ntTSL 2 BASIC15.91■□□□□ 0.14
TRBV6-7A0A0A0MS04 IDH3G-202ENST00000370092 1712 ntTSL 5 BASIC15.91■□□□□ 0.14
TRBV6-7A0A0A0MS04 ARHGEF18-202ENST00000359920 5733 ntAPPRIS ALT2 TSL 2 BASIC15.91■□□□□ 0.14
TRBV6-7A0A0A0MS04 CHRFAM7A-202ENST00000397827 2794 ntTSL 5 BASIC15.91■□□□□ 0.14
TRBV6-7A0A0A0MS04 TEX264-204ENST00000415259 2290 ntAPPRIS P3 TSL 5 BASIC15.91■□□□□ 0.14
TRBV6-7A0A0A0MS04 HOXD11-201ENST00000249504 1533 ntAPPRIS P1 TSL 3 BASIC15.91■□□□□ 0.14
TRBV6-7A0A0A0MS04 PSPN-201ENST00000245810 471 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
TRBV6-7A0A0A0MS04 CDC42EP5-201ENST00000301200 864 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
TRBV6-7A0A0A0MS04 TREX2-204ENST00000370212 861 ntTSL 5 BASIC15.91■□□□□ 0.14
TRBV6-7A0A0A0MS04 TREX2-205ENST00000370231 1255 ntAPPRIS P1 TSL 5 BASIC15.91■□□□□ 0.14
TRBV6-7A0A0A0MS04 HES2-203ENST00000377837 1222 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
TRBV6-7A0A0A0MS04 TREX2-207ENST00000393862 907 ntAPPRIS P1 TSL 2 BASIC15.91■□□□□ 0.14
TRBV6-7A0A0A0MS04 MAP1LC3A-203ENST00000397709 698 ntAPPRIS P1 TSL 3 BASIC15.91■□□□□ 0.14
TRBV6-7A0A0A0MS04 HAGLROS-201ENST00000426615 1121 ntTSL 2 BASIC15.91■□□□□ 0.14
TRBV6-7A0A0A0MS04 AL807752.2-201ENST00000435463 301 ntTSL 3 BASIC15.91■□□□□ 0.14
TRBV6-7A0A0A0MS04 NCF1B-203ENST00000435988 1254 ntBASIC15.91■□□□□ 0.14
TRBV6-7A0A0A0MS04 TUBB8P6-201ENST00000436895 1288 ntBASIC15.91■□□□□ 0.14
TRBV6-7A0A0A0MS04 AL161908.1-201ENST00000451449 449 ntTSL 2 BASIC15.91■□□□□ 0.14
TRBV6-7A0A0A0MS04 PPP1R14BP3-201ENST00000509033 445 ntBASIC15.91■□□□□ 0.14
TRBV6-7A0A0A0MS04 AC120498.8-201ENST00000614275 531 ntBASIC15.91■□□□□ 0.14
TRBV6-7A0A0A0MS04 IGFBP3-211ENST00000615754 792 ntTSL 5 BASIC15.91■□□□□ 0.14
TRBV6-7A0A0A0MS04 ADAM15-207ENST00000368413 1901 ntTSL 5 BASIC15.91■□□□□ 0.14
TRBV6-7A0A0A0MS04 TIMP4-201ENST00000287814 1650 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
TRBV6-7A0A0A0MS04 WWOX-205ENST00000539474 1670 ntTSL 5 BASIC15.91■□□□□ 0.14
TRBV6-7A0A0A0MS04 C6orf89-203ENST00000373685 1400 ntAPPRIS ALT2 TSL 5 BASIC15.91■□□□□ 0.14
TRBV6-7A0A0A0MS04 HAUS4-204ENST00000490506 1447 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
TRBV6-7A0A0A0MS04 PTP4A3-202ENST00000349124 2710 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
TRBV6-7A0A0A0MS04 HOXB2-201ENST00000330070 1562 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
TRBV6-7A0A0A0MS04 TPD52-211ENST00000519303 1594 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
TRBV6-7A0A0A0MS04 TBC1D4-201ENST00000377625 6182 ntAPPRIS ALT2 TSL 1 (best) BASIC15.91■□□□□ 0.14
TRBV6-7A0A0A0MS04 SHISA3-201ENST00000319234 1971 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
TRBV6-7A0A0A0MS04 ETFA-202ENST00000433983 1346 ntTSL 2 BASIC15.91■□□□□ 0.14
TRBV6-7A0A0A0MS04 C19orf84-202ENST00000574814 1318 ntAPPRIS P2 TSL 1 (best) BASIC15.91■□□□□ 0.14
TRBV6-7A0A0A0MS04 FEM1AP3-201ENST00000403722 1741 ntBASIC15.91■□□□□ 0.14
TRBV6-7A0A0A0MS04 TDRP-201ENST00000324079 3395 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
TRBV6-7A0A0A0MS04 SLC39A1-209ENST00000537590 2022 ntTSL 2 BASIC15.9■□□□□ 0.14
TRBV6-7A0A0A0MS04 RBPJL-203ENST00000372743 1623 ntAPPRIS ALT1 TSL 1 (best) BASIC15.9■□□□□ 0.14
TRBV6-7A0A0A0MS04 SOGA3-203ENST00000525778 4077 ntAPPRIS P1 TSL 5 BASIC15.9■□□□□ 0.14
TRBV6-7A0A0A0MS04 TRIM33-202ENST00000369543 3457 ntAPPRIS ALT2 TSL 1 (best) BASIC15.9■□□□□ 0.14
TRBV6-7A0A0A0MS04 TRAF4-201ENST00000262395 2923 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
TRBV6-7A0A0A0MS04 C21orf58-205ENST00000397683 1674 ntAPPRIS ALT2 TSL 2 BASIC15.9■□□□□ 0.14
TRBV6-7A0A0A0MS04 SPON2-203ENST00000431380 1802 ntAPPRIS P1 TSL 5 BASIC15.9■□□□□ 0.14
TRBV6-7A0A0A0MS04 GOLGA3-203ENST00000456883 5496 ntAPPRIS ALT2 TSL 1 (best) BASIC15.9■□□□□ 0.14
TRBV6-7A0A0A0MS04 SNAP23-201ENST00000249647 2687 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
TRBV6-7A0A0A0MS04 CD47-202ENST00000361309 1285 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
TRBV6-7A0A0A0MS04 AC004889.1-203ENST00000464929 819 ntTSL 5 BASIC15.9■□□□□ 0.14
TRBV6-7A0A0A0MS04 OR2A1-AS1-207ENST00000486094 819 ntBASIC15.9■□□□□ 0.14
TRBV6-7A0A0A0MS04 SNHG6-203ENST00000520944 638 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
TRBV6-7A0A0A0MS04 AC010646.1-201ENST00000594059 515 ntAPPRIS P1 TSL 4 BASIC15.9■□□□□ 0.14
TRBV6-7A0A0A0MS04 PTGIR-202ENST00000594275 699 ntTSL 3 BASIC15.9■□□□□ 0.14
TRBV6-7A0A0A0MS04 PTGIR-206ENST00000598865 724 ntTSL 3 BASIC15.9■□□□□ 0.14
TRBV6-7A0A0A0MS04 GGNBP2-210ENST00000611219 2315 ntTSL 2 BASIC15.9■□□□□ 0.14
TRBV6-7A0A0A0MS04 CHRAC1-201ENST00000220913 2488 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
TRBV6-7A0A0A0MS04 KCNC2-203ENST00000393288 2485 ntAPPRIS ALT2 TSL 1 (best) BASIC15.9■□□□□ 0.14
TRBV6-7A0A0A0MS04 DDAH2-211ENST00000375787 1330 ntAPPRIS P1 TSL 5 BASIC15.9■□□□□ 0.14
TRBV6-7A0A0A0MS04 AGER-207ENST00000375076 1492 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
TRBV6-7A0A0A0MS04 PEX16-210ENST00000532681 1639 ntTSL 3 BASIC15.9■□□□□ 0.14
TRBV6-7A0A0A0MS04 OPN5-204ENST00000489301 1931 ntAPPRIS ALT2 TSL 5 BASIC15.9■□□□□ 0.14
TRBV6-7A0A0A0MS04 IGFALS-202ENST00000415638 2136 ntTSL 2 BASIC15.89■□□□□ 0.13
TRBV6-7A0A0A0MS04 FAM117B-201ENST00000392238 5763 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
TRBV6-7A0A0A0MS04 TMEM106C-202ENST00000429772 1515 ntAPPRIS P1 TSL 2 BASIC15.89■□□□□ 0.13
TRBV6-7A0A0A0MS04 SLC39A3-202ENST00000455372 2940 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
TRBV6-7A0A0A0MS04 CDK11B-207ENST00000626918 2457 ntTSL 5 BASIC15.89■□□□□ 0.13
TRBV6-7A0A0A0MS04 SOST-201ENST00000301691 2300 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
TRBV6-7A0A0A0MS04 ATXN7L2-202ENST00000369870 2318 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
TRBV6-7A0A0A0MS04 TBC1D2B-202ENST00000409931 6086 ntAPPRIS P3 TSL 1 (best) BASIC15.89■□□□□ 0.13
TRBV6-7A0A0A0MS04 UTP18-201ENST00000225298 1894 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
TRBV6-7A0A0A0MS04 HOXA13-201ENST00000222753 5030 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
TRBV6-7A0A0A0MS04 ZAR1L-202ENST00000533490 1564 ntAPPRIS P1 TSL 5 BASIC15.89■□□□□ 0.13
TRBV6-7A0A0A0MS04 SHKBP1-201ENST00000291842 2363 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
TRBV6-7A0A0A0MS04 ZBTB45-201ENST00000354590 2352 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
TRBV6-7A0A0A0MS04 MPV17L2-204ENST00000599612 1408 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
TRBV6-7A0A0A0MS04 AC008443.1-203ENST00000505151 886 ntTSL 2 BASIC15.89■□□□□ 0.13
TRBV6-7A0A0A0MS04 ABCC3-217ENST00000515707 656 ntTSL 3 BASIC15.89■□□□□ 0.13
TRBV6-7A0A0A0MS04 CIRBP-213ENST00000587323 1092 ntTSL 5 BASIC15.89■□□□□ 0.13
TRBV6-7A0A0A0MS04 JOSD2-202ENST00000595669 733 ntTSL 2 BASIC15.89■□□□□ 0.13
TRBV6-7A0A0A0MS04 VIM-AS1-202ENST00000605833 918 ntTSL 3 BASIC15.89■□□□□ 0.13
TRBV6-7A0A0A0MS04 ANAPC11-223ENST00000612413 964 ntTSL 3 BASIC15.89■□□□□ 0.13
TRBV6-7A0A0A0MS04 WT1-AS_3.1-201ENST00000613262 234 ntBASIC15.89■□□□□ 0.13
TRBV6-7A0A0A0MS04 PLA2G2F-201ENST00000375102 2723 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
TRBV6-7A0A0A0MS04 AC118553.2-203ENST00000639037 2590 ntAPPRIS P5 TSL 5 BASIC15.89■□□□□ 0.13
TRBV6-7A0A0A0MS04 CARMIL2-201ENST00000334583 4687 ntAPPRIS P3 TSL 1 (best) BASIC15.89■□□□□ 0.13
TRBV6-7A0A0A0MS04 EPOR-201ENST00000222139 2411 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
TRBV6-7A0A0A0MS04 MBD1-206ENST00000382948 2434 ntAPPRIS P3 TSL 2 BASIC15.89■□□□□ 0.13
TRBV6-7A0A0A0MS04 MEPCE-202ENST00000414441 2261 ntTSL 2 BASIC15.89■□□□□ 0.13
TRBV6-7A0A0A0MS04 KXD1-202ENST00000539106 1496 ntAPPRIS P1 TSL 3 BASIC15.89■□□□□ 0.13
TRBV6-7A0A0A0MS04 RAB40C-205ENST00000539661 2609 ntAPPRIS P1 TSL 3 BASIC15.89■□□□□ 0.13
Retrieved 100 of 98,524 protein–RNA pairs in 30.7 ms