Protein–RNA interactions for Protein: Q9BYQ2

KRTAP9-4, Keratin-associated protein 9-4, humanhuman

Predictions only

Length 154 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRTAP9-4Q9BYQ2 PBRM1-202ENST00000337303 4825 ntAPPRIS ALT1 TSL 1 (best) BASIC2.28□□□□□ -2.04
KRTAP9-4Q9BYQ2 ZCCHC11-204ENST00000371544 5858 ntAPPRIS ALT2 TSL 5 BASIC2.28□□□□□ -2.04
KRTAP9-4Q9BYQ2 PTPRB-209ENST00000550857 5839 ntAPPRIS ALT2 TSL 1 (best) BASIC2.28□□□□□ -2.04
KRTAP9-4Q9BYQ2 PTPRK-206ENST00000368215 4651 ntAPPRIS ALT2 TSL 1 (best) BASIC2.28□□□□□ -2.04
KRTAP9-4Q9BYQ2 CNTN1-208ENST00000551295 5557 ntAPPRIS P1 TSL 1 (best) BASIC2.28□□□□□ -2.04
KRTAP9-4Q9BYQ2 AL138756.1-201ENST00000563434 4488 ntTSL 2 BASIC2.28□□□□□ -2.04
KRTAP9-4Q9BYQ2 EPHA4-202ENST00000409854 3454 ntTSL 1 (best) BASIC2.28□□□□□ -2.04
KRTAP9-4Q9BYQ2 AC245060.6-201ENST00000624350 8420 ntBASIC2.28□□□□□ -2.04
KRTAP9-4Q9BYQ2 SORBS1-211ENST00000371247 7354 ntAPPRIS ALT2 TSL 5 BASIC2.28□□□□□ -2.04
KRTAP9-4Q9BYQ2 TXLNG-201ENST00000380122 4401 ntAPPRIS P3 TSL 1 (best) BASIC2.28□□□□□ -2.04
KRTAP9-4Q9BYQ2 PRDM10-205ENST00000526082 3308 ntTSL 1 (best) BASIC2.28□□□□□ -2.04
KRTAP9-4Q9BYQ2 LINC01505-206ENST00000637046 4266 ntTSL 5 BASIC2.28□□□□□ -2.04
KRTAP9-4Q9BYQ2 LINC01247-201ENST00000448901 4209 ntTSL 1 (best) BASIC2.28□□□□□ -2.04
KRTAP9-4Q9BYQ2 ZRANB3-210ENST00000536680 6943 ntTSL 1 (best) BASIC2.28□□□□□ -2.04
KRTAP9-4Q9BYQ2 AP000766.1-201ENST00000561746 4140 ntBASIC2.28□□□□□ -2.04
KRTAP9-4Q9BYQ2 KIF1B-211ENST00000620295 8624 ntTSL 1 (best) BASIC2.28□□□□□ -2.04
KRTAP9-4Q9BYQ2 PROM1-210ENST00000510224 4006 ntAPPRIS P3 TSL 5 BASIC2.28□□□□□ -2.04
KRTAP9-4Q9BYQ2 ZNF260-205ENST00000593142 4047 ntAPPRIS P1 TSL 1 (best) BASIC2.28□□□□□ -2.04
KRTAP9-4Q9BYQ2 AC026398.1-201ENST00000413683 3126 ntAPPRIS P1 TSL 2 BASIC2.28□□□□□ -2.04
KRTAP9-4Q9BYQ2 PDE4B-201ENST00000329654 3998 ntTSL 1 (best) BASIC2.28□□□□□ -2.04
KRTAP9-4Q9BYQ2 GON4L-219ENST00000622608 4801 ntTSL 5 BASIC2.28□□□□□ -2.04
KRTAP9-4Q9BYQ2 AKAP5-202ENST00000394718 6487 ntAPPRIS P1 TSL 1 (best) BASIC2.28□□□□□ -2.04
KRTAP9-4Q9BYQ2 NSUN4-208ENST00000498008 3867 ntTSL 2 BASIC2.28□□□□□ -2.04
KRTAP9-4Q9BYQ2 OPCML-203ENST00000524381 6424 ntTSL 1 (best) BASIC2.28□□□□□ -2.04
KRTAP9-4Q9BYQ2 CCDC73-201ENST00000335185 3849 ntAPPRIS P2 TSL 2 BASIC2.28□□□□□ -2.04
KRTAP9-4Q9BYQ2 NLRP3-202ENST00000348069 3828 ntTSL 1 (best) BASIC2.28□□□□□ -2.04
KRTAP9-4Q9BYQ2 RNA5SP301-201ENST00000362537 121 ntBASIC2.28□□□□□ -2.04
KRTAP9-4Q9BYQ2 RNA5SP389-201ENST00000362610 115 ntBASIC2.28□□□□□ -2.04
KRTAP9-4Q9BYQ2 RNA5SP226-201ENST00000362653 115 ntBASIC2.28□□□□□ -2.04
KRTAP9-4Q9BYQ2 RNA5SP161-201ENST00000363871 115 ntBASIC2.28□□□□□ -2.04
KRTAP9-4Q9BYQ2 RNA5SP427-201ENST00000365323 119 ntBASIC2.28□□□□□ -2.04
KRTAP9-4Q9BYQ2 FHL1-203ENST00000370676 833 ntTSL 5 BASIC2.28□□□□□ -2.04
KRTAP9-4Q9BYQ2 C9orf92-202ENST00000380685 379 ntAPPRIS ALT2 TSL 2 BASIC2.28□□□□□ -2.04
KRTAP9-4Q9BYQ2 SNORA10-201ENST00000384084 133 ntBASIC2.28□□□□□ -2.04
KRTAP9-4Q9BYQ2 RNA5SP18-201ENST00000390935 121 ntBASIC2.28□□□□□ -2.04
KRTAP9-4Q9BYQ2 RPS26P5-201ENST00000418544 335 ntBASIC2.28□□□□□ -2.04
KRTAP9-4Q9BYQ2 FAM183DP-201ENST00000421987 399 ntBASIC2.28□□□□□ -2.04
KRTAP9-4Q9BYQ2 AL513164.1-201ENST00000423268 311 ntTSL 3 BASIC2.28□□□□□ -2.04
KRTAP9-4Q9BYQ2 ZEB1-AS1-202ENST00000424191 320 ntTSL 3 BASIC2.28□□□□□ -2.04
KRTAP9-4Q9BYQ2 RPEP3-201ENST00000425462 676 ntBASIC2.28□□□□□ -2.04
KRTAP9-4Q9BYQ2 COX6CP13-201ENST00000428703 226 ntBASIC2.28□□□□□ -2.04
KRTAP9-4Q9BYQ2 AC016292.1-201ENST00000438344 235 ntTSL 3 BASIC2.28□□□□□ -2.04
KRTAP9-4Q9BYQ2 RPS29P5-201ENST00000452777 171 ntBASIC2.28□□□□□ -2.04
KRTAP9-4Q9BYQ2 RN7SL89P-201ENST00000480252 283 ntBASIC2.28□□□□□ -2.04
KRTAP9-4Q9BYQ2 RN7SL518P-201ENST00000491887 280 ntBASIC2.28□□□□□ -2.04
KRTAP9-4Q9BYQ2 RPL29P14-201ENST00000495837 428 ntBASIC2.28□□□□□ -2.04
KRTAP9-4Q9BYQ2 RNA5SP137-201ENST00000516833 135 ntBASIC2.28□□□□□ -2.04
KRTAP9-4Q9BYQ2 RNU6-1116P-201ENST00000517269 99 ntBASIC2.28□□□□□ -2.04
KRTAP9-4Q9BYQ2 GRPEL2-AS1-201ENST00000521295 401 ntTSL 3 BASIC2.28□□□□□ -2.04
KRTAP9-4Q9BYQ2 MIR4258-201ENST00000580920 91 ntBASIC2.28□□□□□ -2.04
KRTAP9-4Q9BYQ2 AC010325.2-201ENST00000594114 260 ntTSL 3 BASIC2.28□□□□□ -2.04
KRTAP9-4Q9BYQ2 COPS7B-225ENST00000631349 189 ntTSL 5 BASIC2.28□□□□□ -2.04
KRTAP9-4Q9BYQ2 CLEC19A-205ENST00000636231 561 ntAPPRIS P1 TSL 5 BASIC2.28□□□□□ -2.04
KRTAP9-4Q9BYQ2 PARP9-202ENST00000462315 6769 ntAPPRIS ALT2 TSL 1 (best) BASIC2.28□□□□□ -2.04
KRTAP9-4Q9BYQ2 LTBP1-207ENST00000418533 5164 ntTSL 1 (best) BASIC2.28□□□□□ -2.04
KRTAP9-4Q9BYQ2 RFTN2-201ENST00000295049 5827 ntAPPRIS P1 TSL 1 (best) BASIC2.28□□□□□ -2.04
KRTAP9-4Q9BYQ2 CLASP1-208ENST00000455322 5660 ntTSL 5 BASIC2.28□□□□□ -2.04
KRTAP9-4Q9BYQ2 LY75-CD302-201ENST00000504764 5650 ntAPPRIS P4 TSL 2 BASIC2.28□□□□□ -2.04
KRTAP9-4Q9BYQ2 TCF12-207ENST00000557843 4076 ntAPPRIS ALT1 TSL 1 (best) BASIC2.28□□□□□ -2.04
KRTAP9-4Q9BYQ2 SPATS2L-201ENST00000358677 6156 ntAPPRIS P1 TSL 1 (best) BASIC2.28□□□□□ -2.04
KRTAP9-4Q9BYQ2 DLC1-201ENST00000276297 7447 ntAPPRIS P4 TSL 1 (best) BASIC2.28□□□□□ -2.04
KRTAP9-4Q9BYQ2 IQCA1-202ENST00000309507 3155 ntAPPRIS ALT2 TSL 2 BASIC2.28□□□□□ -2.04
KRTAP9-4Q9BYQ2 SASS6-201ENST00000287482 3880 ntAPPRIS P1 TSL 1 (best) BASIC2.28□□□□□ -2.04
KRTAP9-4Q9BYQ2 TTTY15-202ENST00000440408 5284 ntTSL 1 (best) BASIC2.28□□□□□ -2.04
KRTAP9-4Q9BYQ2 CNTN4-202ENST00000397461 5198 ntAPPRIS P1 TSL 5 BASIC2.28□□□□□ -2.05
KRTAP9-4Q9BYQ2 ATP8B1-201ENST00000283684 5818 ntAPPRIS P1 TSL 1 (best) BASIC2.28□□□□□ -2.05
KRTAP9-4Q9BYQ2 VPS36-201ENST00000378060 4417 ntAPPRIS P1 TSL 1 (best) BASIC2.28□□□□□ -2.05
KRTAP9-4Q9BYQ2 ZNF736-202ENST00000423484 7119 ntAPPRIS P1 TSL 2 BASIC2.28□□□□□ -2.05
KRTAP9-4Q9BYQ2 GUCY2F-201ENST00000218006 3714 ntAPPRIS P1 TSL 1 (best) BASIC2.28□□□□□ -2.05
KRTAP9-4Q9BYQ2 FAR2P1-201ENST00000325390 3679 ntTSL 5 BASIC2.28□□□□□ -2.05
KRTAP9-4Q9BYQ2 ERG-205ENST00000398910 4954 ntTSL 5 BASIC2.28□□□□□ -2.05
KRTAP9-4Q9BYQ2 AC016582.1-202ENST00000636341 2982 ntBASIC2.28□□□□□ -2.05
KRTAP9-4Q9BYQ2 MS4A14-202ENST00000395001 3401 ntTSL 5 BASIC2.27□□□□□ -2.05
KRTAP9-4Q9BYQ2 SLMAP-208ENST00000449503 4027 ntTSL 1 (best) BASIC2.27□□□□□ -2.05
KRTAP9-4Q9BYQ2 NLGN4X-204ENST00000381095 5870 ntAPPRIS P2 TSL 1 (best) BASIC2.27□□□□□ -2.05
KRTAP9-4Q9BYQ2 GRIP1-201ENST00000359742 5216 ntTSL 5 BASIC2.27□□□□□ -2.05
KRTAP9-4Q9BYQ2 ISX-201ENST00000308700 3384 ntAPPRIS P1 TSL 1 (best) BASIC2.27□□□□□ -2.05
KRTAP9-4Q9BYQ2 ADGRF5-202ENST00000283296 5810 ntAPPRIS P1 TSL 1 (best) BASIC2.27□□□□□ -2.05
KRTAP9-4Q9BYQ2 CEP44-206ENST00000503780 4534 ntAPPRIS P1 TSL 1 (best) BASIC2.27□□□□□ -2.05
KRTAP9-4Q9BYQ2 TFRC-201ENST00000360110 5111 ntAPPRIS P3 TSL 1 (best) BASIC2.27□□□□□ -2.05
KRTAP9-4Q9BYQ2 DIO2-201ENST00000422005 6272 ntTSL 5 BASIC2.27□□□□□ -2.05
KRTAP9-4Q9BYQ2 MCMDC2-204ENST00000422365 5096 ntAPPRIS P1 TSL 2 BASIC2.27□□□□□ -2.05
KRTAP9-4Q9BYQ2 FAM47C-201ENST00000358047 3270 ntAPPRIS P1 BASIC2.27□□□□□ -2.05
KRTAP9-4Q9BYQ2 POLR1B-204ENST00000417433 3836 ntTSL 2 BASIC2.27□□□□□ -2.05
KRTAP9-4Q9BYQ2 ENPP2-202ENST00000259486 3233 ntAPPRIS P3 TSL 1 (best) BASIC2.27□□□□□ -2.05
KRTAP9-4Q9BYQ2 PIWIL3-204ENST00000533313 3232 ntAPPRIS ALT2 TSL 1 (best) BASIC2.27□□□□□ -2.05
KRTAP9-4Q9BYQ2 YIPF4-201ENST00000238831 11949 ntAPPRIS P1 TSL 1 (best) BASIC2.27□□□□□ -2.05
KRTAP9-4Q9BYQ2 TBC1D31-214ENST00000522420 3167 ntTSL 1 (best) BASIC2.27□□□□□ -2.05
KRTAP9-4Q9BYQ2 SLC24A1-211ENST00000544319 3169 ntAPPRIS ALT2 TSL 5 BASIC2.27□□□□□ -2.05
KRTAP9-4Q9BYQ2 AP003972.1-201ENST00000625192 5446 ntBASIC2.27□□□□□ -2.05
KRTAP9-4Q9BYQ2 MAP3K9-207ENST00000611979 10497 ntTSL 5 BASIC2.27□□□□□ -2.05
KRTAP9-4Q9BYQ2 TPH1-201ENST00000250018 5325 ntAPPRIS P1 TSL 1 (best) BASIC2.27□□□□□ -2.05
KRTAP9-4Q9BYQ2 SGMS1-AS1-201ENST00000443374 12400 ntTSL 4 BASIC2.27□□□□□ -2.05
KRTAP9-4Q9BYQ2 GCSAML-210ENST00000536561 4063 ntAPPRIS P3 TSL 4 BASIC2.27□□□□□ -2.05
KRTAP9-4Q9BYQ2 SLC25A12-202ENST00000422440 2979 ntAPPRIS P1 TSL 1 (best) BASIC2.27□□□□□ -2.05
KRTAP9-4Q9BYQ2 NUP98-202ENST00000355260 5628 ntTSL 5 BASIC2.27□□□□□ -2.05
KRTAP9-4Q9BYQ2 SVIL-202ENST00000375398 8201 ntAPPRIS ALT2 TSL 5 BASIC2.27□□□□□ -2.05
KRTAP9-4Q9BYQ2 POGZ-201ENST00000271715 6626 ntAPPRIS P3 TSL 1 (best) BASIC2.27□□□□□ -2.05
KRTAP9-4Q9BYQ2 PPFIA2-220ENST00000550584 5405 ntTSL 1 (best) BASIC2.27□□□□□ -2.05
KRTAP9-4Q9BYQ2 PPARA-203ENST00000407236 9995 ntAPPRIS P1 TSL 1 (best) BASIC2.27□□□□□ -2.05
Retrieved 100 of 98,524 protein–RNA pairs in 311.2 ms