RNA–Protein interactions for RNA: ENST00000498008.5

NSUN4-208, Transcript of NOP2/Sun RNA methyltransferase family member 4, human

TSL 2 BASIC

Gene NSUN4, Length 3,867 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
NSUN4-208	ENST00000498008	SUPT5H	O00267	1087 aa	Known RBP	12.58	□□□□□ -0.4
NSUN4-208	ENST00000498008	DCAF8L2	P0C7V8	631 aa		12.52	□□□□□ -0.4
NSUN4-208	ENST00000498008	NISCH	Q9Y2I1	1504 aa		12.44	□□□□□ -0.42
NSUN4-208	ENST00000498008	SHROOM4	Q9ULL8	1493 aa		12.41	□□□□□ -0.42
NSUN4-208	ENST00000498008	PCGF6	Q9BYE7	350 aa		12.26	□□□□□ -0.45
NSUN4-208	ENST00000498008	EHMT2	Q96KQ7	1210 aa		12.23	□□□□□ -0.45
NSUN4-208	ENST00000498008	PPARGC1B	Q86YN6	1023 aa	Known RBP	11.97	□□□□□ -0.49
NSUN4-208	ENST00000498008	HRC	P23327	699 aa		11.87	□□□□□ -0.51
NSUN4-208	ENST00000498008	FAM9A	Q8IZU1	332 aa	Predicted RBP	11.86	□□□□□ -0.51
NSUN4-208	ENST00000498008	TTBK1	Q5TCY1	1321 aa	Predicted RBP	11.85	□□□□□ -0.51
NSUN4-208	ENST00000498008	PELP1	Q8IZL8	1130 aa	Known RBP	11.69	□□□□□ -0.54
NSUN4-208	ENST00000498008	LOC105371045	A0A1W2PR82	267 aa		11.65	□□□□□ -0.54
NSUN4-208	ENST00000498008	YTHDC1	Q96MU7	727 aa	Known RBP	11.64	□□□□□ -0.55
NSUN4-208	ENST00000498008	CCER1	Q8TC90	406 aa	Predicted RBP	11.57	□□□□□ -0.56
NSUN4-208	ENST00000498008	CENPB	P07199	599 aa	Predicted RBP	11.55	□□□□□ -0.56
NSUN4-208	ENST00000498008	CHIC1	Q5VXU3	224 aa		11.52	□□□□□ -0.57
NSUN4-208	ENST00000498008	ZEB1	P37275	1124 aa	Predicted RBP	11.48	□□□□□ -0.57
NSUN4-208	ENST00000498008	TRIM26	Q12899	539 aa	Predicted RBP	11.47	□□□□□ -0.57
NSUN4-208	ENST00000498008	TRIM41	Q8WV44	630 aa		11.43	□□□□□ -0.58
NSUN4-208	ENST00000498008	RANGAP1	P46060	587 aa	Predicted RBP	11.39	□□□□□ -0.59
NSUN4-208	ENST00000498008	HNRNPUL2-BSCL2	H3BQZ7	746 aa	Predicted RBP	11.34	□□□□□ -0.59
NSUN4-208	ENST00000498008	GTF3C3	Q9Y5Q9	886 aa		11.31	□□□□□ -0.6
NSUN4-208	ENST00000498008	MYT1	Q01538	1121 aa		11.29	□□□□□ -0.6
NSUN4-208	ENST00000498008	APLP2	Q06481	763 aa		11.23	□□□□□ -0.61
NSUN4-208	ENST00000498008	SCAF1	Q9H7N4	1312 aa	Known RBP	11.22	□□□□□ -0.61
NSUN4-208	ENST00000498008	DIEXF	Q68CQ4	756 aa	Known RBP	11.22	□□□□□ -0.61
NSUN4-208	ENST00000498008	ERICH6	Q7L0X2	663 aa		11.16	□□□□□ -0.62
NSUN4-208	ENST00000498008	UBTF	P17480	764 aa	Known RBP	11.15	□□□□□ -0.62
NSUN4-208	ENST00000498008	ACIN1	Q9UKV3	1341 aa	Known RBP	11.12	□□□□□ -0.63
NSUN4-208	ENST00000498008	HNRNPUL2	Q1KMD3	747 aa	Known RBP	11.12	□□□□□ -0.63
NSUN4-208	ENST00000498008	NEUROD1	Q13562	356 aa		11.1	□□□□□ -0.63
NSUN4-208	ENST00000498008	BCAN	Q96GW7	911 aa		11.05	□□□□□ -0.64
NSUN4-208	ENST00000498008	MYO15B	Q96JP2	1530 aa		11.04	□□□□□ -0.64
NSUN4-208	ENST00000498008	NEFL	P07196	543 aa		11.02	□□□□□ -0.65
NSUN4-208	ENST00000498008	ITGAE	P38570	1179 aa		11	□□□□□ -0.65
NSUN4-208	ENST00000498008	ATP1B4	Q9UN42	357 aa	Predicted RBP	10.95	□□□□□ -0.66
NSUN4-208	ENST00000498008	CNGB1	Q14028	1251 aa	Predicted RBP	10.91	□□□□□ -0.66
NSUN4-208	ENST00000498008	ZNF316	A6NFI3	1004 aa	Predicted RBP	10.85	□□□□□ -0.67
NSUN4-208	ENST00000498008	DCAF1	Q9Y4B6	1507 aa		10.79	□□□□□ -0.68
NSUN4-208	ENST00000498008	MIER1	Q8N108	512 aa		10.76	□□□□□ -0.69
NSUN4-208	ENST00000498008	POLR3GL	Q9BT43	218 aa		10.72	□□□□□ -0.69
NSUN4-208	ENST00000498008	FKBP8	Q14318	412 aa		10.67	□□□□□ -0.7
NSUN4-208	ENST00000498008	TRIM52	Q96A61	297 aa		10.59	□□□□□ -0.71
NSUN4-208	ENST00000498008	RTL5	Q5HYW3	569 aa	Predicted RBP	10.59	□□□□□ -0.71
NSUN4-208	ENST00000498008	IRX6	P78412	446 aa	Predicted RBP	10.57	□□□□□ -0.72
NSUN4-208	ENST00000498008	FAM50A	Q14320	339 aa	Known RBP	10.55	□□□□□ -0.72
NSUN4-208	ENST00000498008	HIRIP3	Q9BW71	556 aa	Predicted RBP	10.55	□□□□□ -0.72
NSUN4-208	ENST00000498008	CDK11A	Q9UQ88	783 aa	Predicted RBP	10.55	□□□□□ -0.72
NSUN4-208	ENST00000498008	DDX10	Q13206	875 aa	Known RBP	10.54	□□□□□ -0.72
NSUN4-208	ENST00000498008	NBR1	Q14596	966 aa		10.52	□□□□□ -0.72
NSUN4-208	ENST00000498008	BCL11A	Q9H165	835 aa		10.52	□□□□□ -0.73
NSUN4-208	ENST00000498008	ANP32E	Q9BTT0	268 aa		10.51	□□□□□ -0.73
NSUN4-208	ENST00000498008	ANP32C	O43423	234 aa		10.5	□□□□□ -0.73
NSUN4-208	ENST00000498008	DAXX	Q9UER7	740 aa	Predicted RBP	10.5	□□□□□ -0.73
NSUN4-208	ENST00000498008	CCDC180	Q9P1Z9	1646 aa		10.49	□□□□□ -0.73
NSUN4-208	ENST00000498008	SUPT16H	Q9Y5B9	1047 aa	Known RBP	10.47	□□□□□ -0.73
NSUN4-208	ENST00000498008	NPM2	Q86SE8	214 aa	Known RBP	10.47	□□□□□ -0.73
NSUN4-208	ENST00000498008	CSRNP3	Q8WYN3	585 aa		10.45	□□□□□ -0.74
NSUN4-208	ENST00000498008	SENP3-EIF4A1	A0A087X0R7	540 aa		10.45	□□□□□ -0.74
NSUN4-208	ENST00000498008	EIF5B	O60841	1220 aa	Known RBP	10.45	□□□□□ -0.74
NSUN4-208	ENST00000498008	HNRNPU	Q00839	825 aa	Known RBP eCLIP	10.44	□□□□□ -0.74
NSUN4-208	ENST00000498008	ZCCHC6	Q5VYS8	1495 aa	Known RBP	10.39	□□□□□ -0.75
NSUN4-208	ENST00000498008	ZNF326	Q5BKZ1	582 aa	Known RBP	10.39	□□□□□ -0.75
NSUN4-208	ENST00000498008	P3H3	Q8IVL6	736 aa		10.38	□□□□□ -0.75
NSUN4-208	ENST00000498008	RTN4	Q9NQC3	1192 aa	Known RBP	10.37	□□□□□ -0.75
NSUN4-208	ENST00000498008	FAM9B	Q8IZU0	186 aa		10.36	□□□□□ -0.75
NSUN4-208	ENST00000498008	CLSPN	Q9HAW4	1339 aa		10.35	□□□□□ -0.75
NSUN4-208	ENST00000498008	PABPN1	Q86U42	306 aa	Known RBP eCLIP	10.35	□□□□□ -0.75
NSUN4-208	ENST00000498008	TSHZ2	Q9NRE2	1034 aa		10.34	□□□□□ -0.75
NSUN4-208	ENST00000498008	SALL2	Q9Y467	1007 aa	Predicted RBP	10.33	□□□□□ -0.76
NSUN4-208	ENST00000498008	ANP32A	P39687	249 aa	Known RBP	10.33	□□□□□ -0.76
NSUN4-208	ENST00000498008	ARID3C	A6NKF2	412 aa		10.29	□□□□□ -0.76
NSUN4-208	ENST00000498008	RBM19	Q9Y4C8	960 aa	Known RBP	10.29	□□□□□ -0.76
NSUN4-208	ENST00000498008	KCNH8	Q96L42	1107 aa		10.29	□□□□□ -0.76
NSUN4-208	ENST00000498008	ARX	Q96QS3	562 aa		10.28	□□□□□ -0.76
NSUN4-208	ENST00000498008	CEP162	Q5TB80	1403 aa		10.27	□□□□□ -0.77
NSUN4-208	ENST00000498008	ABCC9	O60706	1549 aa		10.26	□□□□□ -0.77
NSUN4-208	ENST00000498008	SCRIB	Q14160	1630 aa		10.24	□□□□□ -0.77
NSUN4-208	ENST00000498008	CCDC136	Q96JN2	1154 aa		10.23	□□□□□ -0.77
NSUN4-208	ENST00000498008	ZBTB47	Q9UFB7	747 aa	Predicted RBP	10.22	□□□□□ -0.77
NSUN4-208	ENST00000498008	SIN3A	Q96ST3	1273 aa		10.22	□□□□□ -0.77
NSUN4-208	ENST00000498008	RSF1	Q96T23	1441 aa	Predicted RBP	10.21	□□□□□ -0.77
NSUN4-208	ENST00000498008	B4GALNT3	Q6L9W6	998 aa		10.21	□□□□□ -0.78
NSUN4-208	ENST00000498008	TONSL	Q96HA7	1378 aa		10.19	□□□□□ -0.78
NSUN4-208	ENST00000498008	MRS2	Q9HD23	443 aa		10.19	□□□□□ -0.78
NSUN4-208	ENST00000498008	DEK	P35659	375 aa	Known RBP	10.19	□□□□□ -0.78
NSUN4-208	ENST00000498008	SLC4A1AP	Q9BWU0	796 aa	Known RBP	10.17	□□□□□ -0.78
NSUN4-208	ENST00000498008	LAS1L	Q9Y4W2	734 aa	Known RBP	10.17	□□□□□ -0.78
NSUN4-208	ENST00000498008	CLIP1	P30622	1438 aa		10.17	□□□□□ -0.78
NSUN4-208	ENST00000498008	ZBTB4	Q9P1Z0	1013 aa	Predicted RBP	10.16	□□□□□ -0.78
NSUN4-208	ENST00000498008	CHIC2	Q9UKJ5	165 aa		10.15	□□□□□ -0.78
NSUN4-208	ENST00000498008	SOGA1	O94964	1423 aa		10.09	□□□□□ -0.79
NSUN4-208	ENST00000498008	NOP58	Q9Y2X3	529 aa	Known RBP	10.09	□□□□□ -0.79
NSUN4-208	ENST00000498008	MYT1L	Q9UL68	1186 aa		10.08	□□□□□ -0.8
NSUN4-208	ENST00000498008	RB1CC1	Q8TDY2	1594 aa		10.07	□□□□□ -0.8
NSUN4-208	ENST00000498008	NEFM	P07197	916 aa		10.06	□□□□□ -0.8
NSUN4-208	ENST00000498008	TMC1	Q8TDI8	760 aa		10.06	□□□□□ -0.8
NSUN4-208	ENST00000498008	TNIK	Q9UKE5	1360 aa		10.04	□□□□□ -0.8
NSUN4-208	ENST00000498008	CANX	P27824	592 aa	Known RBP	10.04	□□□□□ -0.8
NSUN4-208	ENST00000498008	KANK4	Q5T7N3	995 aa	Predicted RBP	10.03	□□□□□ -0.8

Retrieved 100 of 20,778 RNA–protein pairs in 146.9 ms