RNA–Protein interactions for RNA: ENST00000448901.1

LINC01247-201, Transcript of long intergenic non-protein coding RNA 1247, humanhuman

TSL 1 (best) BASIC

Gene LINC01247, Length 4,209 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01247-201ENST00000448901 SLC24A1O60721 1099 aa8.62□□□□□ -1.03
LINC01247-201ENST00000448901 CHIC1Q5VXU3 224 aa8.62□□□□□ -1.03
LINC01247-201ENST00000448901 AEBP2Q6ZN18 517 aaPredicted RBP8.24□□□□□ -1.09
LINC01247-201ENST00000448901 PLPPR3Q6T4P5 718 aa8.11□□□□□ -1.11
LINC01247-201ENST00000448901 EHMT2Q96KQ7 1210 aa8.04□□□□□ -1.12
LINC01247-201ENST00000448901 RTN4Q9NQC3 1192 aaKnown RBP7.86□□□□□ -1.15
LINC01247-201ENST00000448901 PHF23Q9BUL5 403 aaPredicted RBP7.81□□□□□ -1.16
LINC01247-201ENST00000448901 DAXXQ9UER7 740 aaPredicted RBP7.78□□□□□ -1.16
LINC01247-201ENST00000448901 PRKCSHP14314 528 aaPredicted RBP7.76□□□□□ -1.17
LINC01247-201ENST00000448901 APLP2Q06481 763 aa7.72□□□□□ -1.17
LINC01247-201ENST00000448901 NCBP3Q53F19 620 aaKnown RBP7.67□□□□□ -1.18
LINC01247-201ENST00000448901 KCNA4P22459 653 aa7.63□□□□□ -1.19
LINC01247-201ENST00000448901 CSRNP3Q8WYN3 585 aa7.55□□□□□ -1.2
LINC01247-201ENST00000448901 TIMELESSQ9UNS1 1208 aa7.52□□□□□ -1.21
LINC01247-201ENST00000448901 PELP1Q8IZL8 1130 aaKnown RBP7.39□□□□□ -1.23
LINC01247-201ENST00000448901 AMER1Q5JTC6 1135 aaPredicted RBP7.3□□□□□ -1.24
LINC01247-201ENST00000448901 KLHL34Q8N239 644 aa7.29□□□□□ -1.24
LINC01247-201ENST00000448901 ARXQ96QS3 562 aa7.22□□□□□ -1.25
LINC01247-201ENST00000448901 TTBK1Q5TCY1 1321 aaPredicted RBP7.22□□□□□ -1.25
LINC01247-201ENST00000448901 PLEKHG5O94827 1062 aa7.2□□□□□ -1.26
LINC01247-201ENST00000448901 MYT1Q01538 1121 aa7.19□□□□□ -1.26
LINC01247-201ENST00000448901 FAM9AQ8IZU1 332 aaPredicted RBP7.16□□□□□ -1.26
LINC01247-201ENST00000448901 TAOK2Q9UL54 1235 aa7.16□□□□□ -1.26
LINC01247-201ENST00000448901 SLC4A1APQ9BWU0 796 aaKnown RBP7.14□□□□□ -1.27
LINC01247-201ENST00000448901 ZBTB22O15209 634 aa7.12□□□□□ -1.27
LINC01247-201ENST00000448901 TULP1O00294 542 aaPredicted RBP7.09□□□□□ -1.27
LINC01247-201ENST00000448901 ADRA2BP18089 450 aa7.08□□□□□ -1.28
LINC01247-201ENST00000448901 SCAF1Q9H7N4 1312 aaKnown RBP7.07□□□□□ -1.28
LINC01247-201ENST00000448901 BCL11AQ9H165 835 aa7.04□□□□□ -1.28
LINC01247-201ENST00000448901 PPP6R1Q9UPN7 881 aa7.03□□□□□ -1.28
LINC01247-201ENST00000448901 ERICH6Q7L0X2 663 aa6.98□□□□□ -1.29
LINC01247-201ENST00000448901 LOC105371045A0A1W2PR82 267 aa6.98□□□□□ -1.29
LINC01247-201ENST00000448901 EIF5BO60841 1220 aaKnown RBP6.94□□□□□ -1.3
LINC01247-201ENST00000448901 HRCP23327 699 aa6.93□□□□□ -1.3
LINC01247-201ENST00000448901 TPRNQ4KMQ1 711 aa6.88□□□□□ -1.31
LINC01247-201ENST00000448901 KDM2AQ9Y2K7 1162 aa6.88□□□□□ -1.31
LINC01247-201ENST00000448901 PLCB2Q00722 1185 aa6.88□□□□□ -1.31
LINC01247-201ENST00000448901 TRIM26Q12899 539 aaPredicted RBP6.8□□□□□ -1.32
LINC01247-201ENST00000448901 HOMEZQ8IX15 550 aa6.8□□□□□ -1.32
LINC01247-201ENST00000448901 BCANQ96GW7 911 aa6.8□□□□□ -1.32
LINC01247-201ENST00000448901 GTF3C3Q9Y5Q9 886 aa6.8□□□□□ -1.32
LINC01247-201ENST00000448901 TMEM132AQ24JP5 1023 aa6.79□□□□□ -1.32
LINC01247-201ENST00000448901 PODXL2Q9NZ53 605 aa6.79□□□□□ -1.32
LINC01247-201ENST00000448901 HAP1P54257 671 aaPredicted RBP6.75□□□□□ -1.33
LINC01247-201ENST00000448901 FBLN2P98095 1184 aa6.73□□□□□ -1.33
LINC01247-201ENST00000448901 MYO15BQ96JP2 1530 aa6.72□□□□□ -1.33
LINC01247-201ENST00000448901 UBTFP17480 764 aaKnown RBP6.71□□□□□ -1.33
LINC01247-201ENST00000448901 FKBP8Q14318 412 aa6.7□□□□□ -1.34
LINC01247-201ENST00000448901 NPM3O75607 178 aaKnown RBP6.7□□□□□ -1.34
LINC01247-201ENST00000448901 PPARGC1BQ86YN6 1023 aaKnown RBP6.67□□□□□ -1.34
LINC01247-201ENST00000448901 TRHP20396 242 aaPredicted RBP6.67□□□□□ -1.34
LINC01247-201ENST00000448901 UBE2Q2Q8WVN8 375 aa6.66□□□□□ -1.34
LINC01247-201ENST00000448901 SENP3Q9H4L4 574 aaPredicted RBP6.65□□□□□ -1.34
LINC01247-201ENST00000448901 SAMD1Q6SPF0 538 aaPredicted RBP6.64□□□□□ -1.35
LINC01247-201ENST00000448901 IGSF3O75054 1194 aa6.63□□□□□ -1.35
LINC01247-201ENST00000448901 PPP4R3CPQ6ZMV5 832 aa6.61□□□□□ -1.35
LINC01247-201ENST00000448901 NPM2Q86SE8 214 aaKnown RBP6.6□□□□□ -1.35
LINC01247-201ENST00000448901 DHX37Q8IY37 1157 aaKnown RBP6.58□□□□□ -1.36
LINC01247-201ENST00000448901 RANGAP1P46060 587 aaPredicted RBP6.57□□□□□ -1.36
LINC01247-201ENST00000448901 ANO8Q9HCE9 1232 aaPredicted RBP6.56□□□□□ -1.36
LINC01247-201ENST00000448901 NISCHQ9Y2I1 1504 aa6.54□□□□□ -1.36
LINC01247-201ENST00000448901 DCAF8L2P0C7V8 631 aa6.52□□□□□ -1.36
LINC01247-201ENST00000448901 CHMP4AQ9BY43 222 aa6.5□□□□□ -1.37
LINC01247-201ENST00000448901 VSIG10Q8N0Z9 540 aa6.49□□□□□ -1.37
LINC01247-201ENST00000448901 DHX30Q7L2E3 1194 aaKnown RBP eCLIP6.49□□□□□ -1.37
LINC01247-201ENST00000448901 FOXD4L1Q9NU39 408 aa6.48□□□□□ -1.37
LINC01247-201ENST00000448901 DNAJC5Q9H3Z4 198 aa6.48□□□□□ -1.37
LINC01247-201ENST00000448901 C1orf115Q9H7X2 142 aa6.48□□□□□ -1.37
LINC01247-201ENST00000448901 NECTIN2Q92692 538 aa6.47□□□□□ -1.37
LINC01247-201ENST00000448901 CFAP44Q96MT7 982 aa6.47□□□□□ -1.37
LINC01247-201ENST00000448901 C14orf37Q86TY3 774 aa6.47□□□□□ -1.37
LINC01247-201ENST00000448901 CCDC136Q96JN2 1154 aa6.47□□□□□ -1.37
LINC01247-201ENST00000448901 IRX6P78412 446 aaPredicted RBP6.47□□□□□ -1.37
LINC01247-201ENST00000448901 SUPT5HO00267 1087 aaKnown RBP6.45□□□□□ -1.38
LINC01247-201ENST00000448901 PDIA4P13667 645 aaKnown RBP6.44□□□□□ -1.38
LINC01247-201ENST00000448901 NEUROD1Q13562 356 aa6.44□□□□□ -1.38
LINC01247-201ENST00000448901 BCL11BQ9C0K0 894 aaPredicted RBP6.43□□□□□ -1.38
LINC01247-201ENST00000448901 ANP32EQ9BTT0 268 aa6.42□□□□□ -1.38
LINC01247-201ENST00000448901 NPM1P06748 294 aaKnown RBP eCLIP6.42□□□□□ -1.38
LINC01247-201ENST00000448901 FBXO3Q9UK99 471 aa6.42□□□□□ -1.38
LINC01247-201ENST00000448901 A0A0U1RQG5 324 aaPredicted RBP6.41□□□□□ -1.38
LINC01247-201ENST00000448901 CNKSR2Q8WXI2 1034 aa6.4□□□□□ -1.38
LINC01247-201ENST00000448901 ACIN1Q9UKV3 1341 aaKnown RBP6.39□□□□□ -1.39
LINC01247-201ENST00000448901 PDE4CQ08493 712 aa6.39□□□□□ -1.39
LINC01247-201ENST00000448901 PKNOX2Q96KN3 472 aa6.35□□□□□ -1.39
LINC01247-201ENST00000448901 SALL2Q9Y467 1007 aaPredicted RBP6.35□□□□□ -1.39
LINC01247-201ENST00000448901 PKD2Q13563 968 aa6.33□□□□□ -1.4
LINC01247-201ENST00000448901 CCDC180Q9P1Z9 1646 aa6.32□□□□□ -1.4
LINC01247-201ENST00000448901 PAXIP1Q6ZW49 1069 aaPredicted RBP6.3□□□□□ -1.4
LINC01247-201ENST00000448901 ZNF428Q96B54 188 aa6.29□□□□□ -1.4
LINC01247-201ENST00000448901 FGD1P98174 961 aa6.26□□□□□ -1.41
LINC01247-201ENST00000448901 TSHZ2Q9NRE2 1034 aa6.25□□□□□ -1.41
LINC01247-201ENST00000448901 ZNF692Q9BU19 519 aaPredicted RBP6.25□□□□□ -1.41
LINC01247-201ENST00000448901 FOXD1Q16676 465 aa6.24□□□□□ -1.41
LINC01247-201ENST00000448901 RGS22Q8NE09 1264 aa6.23□□□□□ -1.41
LINC01247-201ENST00000448901 DCAF1Q9Y4B6 1507 aa6.23□□□□□ -1.41
LINC01247-201ENST00000448901 NBR1Q14596 966 aa6.23□□□□□ -1.41
LINC01247-201ENST00000448901 CENPBP07199 599 aaPredicted RBP6.23□□□□□ -1.41
LINC01247-201ENST00000448901 BRPF1P55201 1214 aaPredicted RBP6.22□□□□□ -1.41
LINC01247-201ENST00000448901 MSH5O43196 834 aa6.21□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms