RNA–Protein interactions for RNA: ENST00000550584.6

PPFIA2-220, Transcript of PTPRF interacting protein alpha 2, humanhuman

TSL 1 (best) BASIC

Gene PPFIA2, Length 5,405 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPFIA2-220ENST00000550584 MYT1Q01538 1121 aa15.36■□□□□ 0.05
PPFIA2-220ENST00000550584 PELP1Q8IZL8 1130 aaKnown RBP15.21■□□□□ 0.03
PPFIA2-220ENST00000550584 TTBK1Q5TCY1 1321 aaPredicted RBP14.25□□□□□ -0.13
PPFIA2-220ENST00000550584 CENPBP07199 599 aaPredicted RBP13.96□□□□□ -0.17
PPFIA2-220ENST00000550584 ZEB1P37275 1124 aaPredicted RBP13.91□□□□□ -0.18
PPFIA2-220ENST00000550584 CCER1Q8TC90 406 aaPredicted RBP13.83□□□□□ -0.2
PPFIA2-220ENST00000550584 ERICH6Q7L0X2 663 aa13.73□□□□□ -0.21
PPFIA2-220ENST00000550584 YTHDC1Q96MU7 727 aaKnown RBP13.51□□□□□ -0.25
PPFIA2-220ENST00000550584 HRCP23327 699 aa13.49□□□□□ -0.25
PPFIA2-220ENST00000550584 PCGF6Q9BYE7 350 aa13.33□□□□□ -0.28
PPFIA2-220ENST00000550584 NEFLP07196 543 aa13.23□□□□□ -0.29
PPFIA2-220ENST00000550584 MYT1LQ9UL68 1186 aa13.13□□□□□ -0.31
PPFIA2-220ENST00000550584 SUPT5HO00267 1087 aaKnown RBP13.1□□□□□ -0.31
PPFIA2-220ENST00000550584 CLSPNQ9HAW4 1339 aa13.04□□□□□ -0.32
PPFIA2-220ENST00000550584 TRIM26Q12899 539 aaPredicted RBP13.02□□□□□ -0.33
PPFIA2-220ENST00000550584 GLIPR1L2Q4G1C9 344 aa12.97□□□□□ -0.33
PPFIA2-220ENST00000550584 RTL5Q5HYW3 569 aaPredicted RBP12.96□□□□□ -0.33
PPFIA2-220ENST00000550584 NISCHQ9Y2I1 1504 aa12.94□□□□□ -0.34
PPFIA2-220ENST00000550584 ACIN1Q9UKV3 1341 aaKnown RBP12.84□□□□□ -0.35
PPFIA2-220ENST00000550584 APLP2Q06481 763 aa12.83□□□□□ -0.36
PPFIA2-220ENST00000550584 GTF3C3Q9Y5Q9 886 aa12.8□□□□□ -0.36
PPFIA2-220ENST00000550584 DAXXQ9UER7 740 aaPredicted RBP12.78□□□□□ -0.36
PPFIA2-220ENST00000550584 DIEXFQ68CQ4 756 aaKnown RBP12.69□□□□□ -0.38
PPFIA2-220ENST00000550584 DCAF8L2P0C7V8 631 aa12.62□□□□□ -0.39
PPFIA2-220ENST00000550584 PPARGC1BQ86YN6 1023 aaKnown RBP12.6□□□□□ -0.39
PPFIA2-220ENST00000550584 ANP32EQ9BTT0 268 aa12.58□□□□□ -0.4
PPFIA2-220ENST00000550584 CDK11AQ9UQ88 783 aaPredicted RBP12.57□□□□□ -0.4
PPFIA2-220ENST00000550584 FAM9AQ8IZU1 332 aaPredicted RBP12.56□□□□□ -0.4
PPFIA2-220ENST00000550584 BCL11AQ9H165 835 aa12.55□□□□□ -0.4
PPFIA2-220ENST00000550584 SCAF1Q9H7N4 1312 aaKnown RBP12.51□□□□□ -0.41
PPFIA2-220ENST00000550584 ZNF316A6NFI3 1004 aaPredicted RBP12.51□□□□□ -0.41
PPFIA2-220ENST00000550584 SHROOM4Q9ULL8 1493 aa12.5□□□□□ -0.41
PPFIA2-220ENST00000550584 RANGAP1P46060 587 aaPredicted RBP12.49□□□□□ -0.41
PPFIA2-220ENST00000550584 EIF5BO60841 1220 aaKnown RBP12.43□□□□□ -0.42
PPFIA2-220ENST00000550584 ANP32AP39687 249 aaKnown RBP12.4□□□□□ -0.43
PPFIA2-220ENST00000550584 TRIM41Q8WV44 630 aa12.35□□□□□ -0.43
PPFIA2-220ENST00000550584 DCAF1Q9Y4B6 1507 aa12.33□□□□□ -0.44
PPFIA2-220ENST00000550584 ERICH6BQ5W0A0 696 aa12.29□□□□□ -0.44
PPFIA2-220ENST00000550584 SLC24A1O60721 1099 aa12.26□□□□□ -0.45
PPFIA2-220ENST00000550584 NEUROD1Q13562 356 aa12.26□□□□□ -0.45
PPFIA2-220ENST00000550584 NCLP19338 710 aaKnown RBP12.23□□□□□ -0.45
PPFIA2-220ENST00000550584 CHIC1Q5VXU3 224 aa12.23□□□□□ -0.45
PPFIA2-220ENST00000550584 EHMT2Q96KQ7 1210 aa12.22□□□□□ -0.45
PPFIA2-220ENST00000550584 TNNT2P45379 298 aaPredicted RBP12.21□□□□□ -0.46
PPFIA2-220ENST00000550584 ANP32BQ92688 251 aaKnown RBP12.17□□□□□ -0.46
PPFIA2-220ENST00000550584 BCANQ96GW7 911 aa12.13□□□□□ -0.47
PPFIA2-220ENST00000550584 ZBTB47Q9UFB7 747 aaPredicted RBP12.12□□□□□ -0.47
PPFIA2-220ENST00000550584 ANP32CO43423 234 aa12.1□□□□□ -0.47
PPFIA2-220ENST00000550584 TRIM44Q96DX7 344 aaPredicted RBP12.1□□□□□ -0.47
PPFIA2-220ENST00000550584 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP12.08□□□□□ -0.48
PPFIA2-220ENST00000550584 CCDC180Q9P1Z9 1646 aa12.07□□□□□ -0.48
PPFIA2-220ENST00000550584 PPM1GO15355 546 aaPredicted RBP12.04□□□□□ -0.48
PPFIA2-220ENST00000550584 FKBP8Q14318 412 aa12.04□□□□□ -0.48
PPFIA2-220ENST00000550584 DDRGK1Q96HY6 314 aa12.04□□□□□ -0.48
PPFIA2-220ENST00000550584 UBTFP17480 764 aaKnown RBP12.01□□□□□ -0.49
PPFIA2-220ENST00000550584 PRKCSHP14314 528 aaPredicted RBP12□□□□□ -0.49
PPFIA2-220ENST00000550584 DEKP35659 375 aaKnown RBP11.96□□□□□ -0.5
PPFIA2-220ENST00000550584 NBR1Q14596 966 aa11.95□□□□□ -0.5
PPFIA2-220ENST00000550584 LOC105371045A0A1W2PR82 267 aa11.93□□□□□ -0.5
PPFIA2-220ENST00000550584 CDK11BP21127 795 aaKnown RBP11.93□□□□□ -0.5
PPFIA2-220ENST00000550584 RSPH6AQ9H0K4 717 aa11.93□□□□□ -0.5
PPFIA2-220ENST00000550584 ZNF326Q5BKZ1 582 aaKnown RBP11.92□□□□□ -0.5
PPFIA2-220ENST00000550584 NEFMP07197 916 aa11.91□□□□□ -0.5
PPFIA2-220ENST00000550584 NOP58Q9Y2X3 529 aaKnown RBP11.9□□□□□ -0.5
PPFIA2-220ENST00000550584 CSRNP3Q8WYN3 585 aa11.88□□□□□ -0.51
PPFIA2-220ENST00000550584 HSP90AA1P07900 732 aaKnown RBP11.86□□□□□ -0.51
PPFIA2-220ENST00000550584 L1TD1Q5T7N2 865 aaKnown RBP11.85□□□□□ -0.51
PPFIA2-220ENST00000550584 UPF2Q9HAU5 1272 aaKnown RBP11.85□□□□□ -0.51
PPFIA2-220ENST00000550584 HNRNPUL2Q1KMD3 747 aaKnown RBP11.84□□□□□ -0.51
PPFIA2-220ENST00000550584 NAP1L5Q96NT1 182 aaPredicted RBP11.84□□□□□ -0.51
PPFIA2-220ENST00000550584 SUPT16HQ9Y5B9 1047 aaKnown RBP11.83□□□□□ -0.52
PPFIA2-220ENST00000550584 NPM2Q86SE8 214 aaKnown RBP11.8□□□□□ -0.52
PPFIA2-220ENST00000550584 BECN1Q14457 450 aa11.78□□□□□ -0.52
PPFIA2-220ENST00000550584 PKNOX2Q96KN3 472 aa11.77□□□□□ -0.52
PPFIA2-220ENST00000550584 ARID4BQ4LE39 1312 aaPredicted RBP11.76□□□□□ -0.53
PPFIA2-220ENST00000550584 USP35Q9P2H5 1018 aa11.76□□□□□ -0.53
PPFIA2-220ENST00000550584 CCDC136Q96JN2 1154 aa11.75□□□□□ -0.53
PPFIA2-220ENST00000550584 RBM19Q9Y4C8 960 aaKnown RBP11.74□□□□□ -0.53
PPFIA2-220ENST00000550584 PODXL2Q9NZ53 605 aa11.73□□□□□ -0.53
PPFIA2-220ENST00000550584 PTMSP20962 102 aa11.73□□□□□ -0.53
PPFIA2-220ENST00000550584 MIER1Q8N108 512 aa11.73□□□□□ -0.53
PPFIA2-220ENST00000550584 POLR3GLQ9BT43 218 aa11.72□□□□□ -0.53
PPFIA2-220ENST00000550584 PPP4R2Q9NY27 417 aa11.72□□□□□ -0.53
PPFIA2-220ENST00000550584 TSHZ2Q9NRE2 1034 aa11.71□□□□□ -0.53
PPFIA2-220ENST00000550584 HSP90AA2PQ14568 343 aaPredicted RBP11.68□□□□□ -0.54
PPFIA2-220ENST00000550584 RTN4Q9NQC3 1192 aaKnown RBP11.67□□□□□ -0.54
PPFIA2-220ENST00000550584 FANCIQ9NVI1 1328 aa11.66□□□□□ -0.54
PPFIA2-220ENST00000550584 GOLGA6L22H0YM25 854 aa11.66□□□□□ -0.54
PPFIA2-220ENST00000550584 GOLGA6L2Q8N9W4 650 aaPredicted RBP11.65□□□□□ -0.54
PPFIA2-220ENST00000550584 HNRNPUQ00839 825 aaKnown RBP eCLIP11.64□□□□□ -0.55
PPFIA2-220ENST00000550584 PNNQ9H307 717 aaKnown RBP11.64□□□□□ -0.55
PPFIA2-220ENST00000550584 CNGB1Q14028 1251 aaPredicted RBP11.63□□□□□ -0.55
PPFIA2-220ENST00000550584 UBE2Q2Q8WVN8 375 aa11.63□□□□□ -0.55
PPFIA2-220ENST00000550584 VSIG10Q8N0Z9 540 aa11.62□□□□□ -0.55
PPFIA2-220ENST00000550584 LAS1LQ9Y4W2 734 aaKnown RBP11.57□□□□□ -0.56
PPFIA2-220ENST00000550584 CANXP27824 592 aaKnown RBP11.57□□□□□ -0.56
PPFIA2-220ENST00000550584 ZBTB4Q9P1Z0 1013 aaPredicted RBP11.57□□□□□ -0.56
PPFIA2-220ENST00000550584 MSNP26038 577 aaKnown RBP11.56□□□□□ -0.56
PPFIA2-220ENST00000550584 ATP1B4Q9UN42 357 aaPredicted RBP11.55□□□□□ -0.56
PPFIA2-220ENST00000550584 ITGAEP38570 1179 aa11.54□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 19.8 ms