RNA–Protein interactions for RNA: ENST00000397461.5

CNTN4-202, Transcript of contactin 4, humanhuman

APPRIS P1 TSL 5 BASIC

Gene CNTN4, Length 5,198 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNTN4-202ENST00000397461 DCAF8L2P0C7V8 631 aa14.7□□□□□ -0.06
CNTN4-202ENST00000397461 NISCHQ9Y2I1 1504 aa14.12□□□□□ -0.15
CNTN4-202ENST00000397461 SUPT5HO00267 1087 aaKnown RBP14.07□□□□□ -0.16
CNTN4-202ENST00000397461 SHROOM4Q9ULL8 1493 aa13.81□□□□□ -0.2
CNTN4-202ENST00000397461 EHMT2Q96KQ7 1210 aa13.58□□□□□ -0.24
CNTN4-202ENST00000397461 APLP2Q06481 763 aa13.31□□□□□ -0.28
CNTN4-202ENST00000397461 PELP1Q8IZL8 1130 aaKnown RBP13.28□□□□□ -0.28
CNTN4-202ENST00000397461 FAM9AQ8IZU1 332 aaPredicted RBP13.26□□□□□ -0.29
CNTN4-202ENST00000397461 PCGF6Q9BYE7 350 aa13.2□□□□□ -0.3
CNTN4-202ENST00000397461 TTBK1Q5TCY1 1321 aaPredicted RBP13.13□□□□□ -0.31
CNTN4-202ENST00000397461 TRIM41Q8WV44 630 aa13.03□□□□□ -0.32
CNTN4-202ENST00000397461 RANGAP1P46060 587 aaPredicted RBP12.97□□□□□ -0.33
CNTN4-202ENST00000397461 ZEB1P37275 1124 aaPredicted RBP12.97□□□□□ -0.33
CNTN4-202ENST00000397461 CCER1Q8TC90 406 aaPredicted RBP12.94□□□□□ -0.34
CNTN4-202ENST00000397461 CENPBP07199 599 aaPredicted RBP12.91□□□□□ -0.34
CNTN4-202ENST00000397461 UBTFP17480 764 aaKnown RBP12.85□□□□□ -0.35
CNTN4-202ENST00000397461 ATP1B4Q9UN42 357 aaPredicted RBP12.83□□□□□ -0.36
CNTN4-202ENST00000397461 ERICH6Q7L0X2 663 aa12.71□□□□□ -0.37
CNTN4-202ENST00000397461 PPARGC1BQ86YN6 1023 aaKnown RBP12.68□□□□□ -0.38
CNTN4-202ENST00000397461 TRIM26Q12899 539 aaPredicted RBP12.65□□□□□ -0.38
CNTN4-202ENST00000397461 YTHDC1Q96MU7 727 aaKnown RBP12.65□□□□□ -0.38
CNTN4-202ENST00000397461 NEFLP07196 543 aa12.61□□□□□ -0.39
CNTN4-202ENST00000397461 HRCP23327 699 aa12.54□□□□□ -0.4
CNTN4-202ENST00000397461 LOC105371045A0A1W2PR82 267 aa12.53□□□□□ -0.4
CNTN4-202ENST00000397461 CHIC1Q5VXU3 224 aa12.53□□□□□ -0.4
CNTN4-202ENST00000397461 ITGAEP38570 1179 aa12.45□□□□□ -0.42
CNTN4-202ENST00000397461 HNRNPUL2Q1KMD3 747 aaKnown RBP12.4□□□□□ -0.43
CNTN4-202ENST00000397461 MYT1Q01538 1121 aa12.38□□□□□ -0.43
CNTN4-202ENST00000397461 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP12.36□□□□□ -0.43
CNTN4-202ENST00000397461 POLR3GLQ9BT43 218 aa12.32□□□□□ -0.44
CNTN4-202ENST00000397461 MYT1LQ9UL68 1186 aa12.3□□□□□ -0.44
CNTN4-202ENST00000397461 CNGB1Q14028 1251 aaPredicted RBP12.21□□□□□ -0.46
CNTN4-202ENST00000397461 DIEXFQ68CQ4 756 aaKnown RBP12.21□□□□□ -0.46
CNTN4-202ENST00000397461 DAXXQ9UER7 740 aaPredicted RBP12.21□□□□□ -0.46
CNTN4-202ENST00000397461 FAM50AQ14320 339 aaKnown RBP12.13□□□□□ -0.47
CNTN4-202ENST00000397461 PABPN1Q86U42 306 aaKnown RBP eCLIP12.11□□□□□ -0.47
CNTN4-202ENST00000397461 ABCC9O60706 1549 aa12.1□□□□□ -0.47
CNTN4-202ENST00000397461 TRIM52Q96A61 297 aa12.05□□□□□ -0.48
CNTN4-202ENST00000397461 NEUROD1Q13562 356 aa12.04□□□□□ -0.48
CNTN4-202ENST00000397461 SLC4A1APQ9BWU0 796 aaKnown RBP12.04□□□□□ -0.48
CNTN4-202ENST00000397461 CLSPNQ9HAW4 1339 aa11.97□□□□□ -0.49
CNTN4-202ENST00000397461 GTF3C3Q9Y5Q9 886 aa11.95□□□□□ -0.5
CNTN4-202ENST00000397461 RTL5Q5HYW3 569 aaPredicted RBP11.94□□□□□ -0.5
CNTN4-202ENST00000397461 ANP32CO43423 234 aa11.94□□□□□ -0.5
CNTN4-202ENST00000397461 ZNF316A6NFI3 1004 aaPredicted RBP11.93□□□□□ -0.5
CNTN4-202ENST00000397461 BCANQ96GW7 911 aa11.92□□□□□ -0.5
CNTN4-202ENST00000397461 ZNF326Q5BKZ1 582 aaKnown RBP11.91□□□□□ -0.5
CNTN4-202ENST00000397461 CSRNP3Q8WYN3 585 aa11.9□□□□□ -0.5
CNTN4-202ENST00000397461 FBLN2P98095 1184 aa11.85□□□□□ -0.51
CNTN4-202ENST00000397461 P3H3Q8IVL6 736 aa11.84□□□□□ -0.51
CNTN4-202ENST00000397461 CDK11AQ9UQ88 783 aaPredicted RBP11.82□□□□□ -0.52
CNTN4-202ENST00000397461 ACIN1Q9UKV3 1341 aaKnown RBP11.79□□□□□ -0.52
CNTN4-202ENST00000397461 ARID3CA6NKF2 412 aa11.78□□□□□ -0.52
CNTN4-202ENST00000397461 NPM1P06748 294 aaKnown RBP eCLIP11.72□□□□□ -0.53
CNTN4-202ENST00000397461 ESF1Q9H501 851 aaKnown RBP11.72□□□□□ -0.53
CNTN4-202ENST00000397461 ZNF777Q9ULD5 760 aaPredicted RBP11.71□□□□□ -0.53
CNTN4-202ENST00000397461 ZBTB47Q9UFB7 747 aaPredicted RBP11.71□□□□□ -0.53
CNTN4-202ENST00000397461 CANXP27824 592 aaKnown RBP11.7□□□□□ -0.54
CNTN4-202ENST00000397461 SCRIBQ14160 1630 aa11.7□□□□□ -0.54
CNTN4-202ENST00000397461 ZCCHC6Q5VYS8 1495 aaKnown RBP11.69□□□□□ -0.54
CNTN4-202ENST00000397461 DCAF1Q9Y4B6 1507 aa11.69□□□□□ -0.54
CNTN4-202ENST00000397461 TONSLQ96HA7 1378 aa11.65□□□□□ -0.54
CNTN4-202ENST00000397461 NEFMP07197 916 aa11.64□□□□□ -0.55
CNTN4-202ENST00000397461 BCL11AQ9H165 835 aa11.62□□□□□ -0.55
CNTN4-202ENST00000397461 ANP32AP39687 249 aaKnown RBP11.62□□□□□ -0.55
CNTN4-202ENST00000397461 SLC24A1O60721 1099 aa11.61□□□□□ -0.55
CNTN4-202ENST00000397461 FKBP8Q14318 412 aa11.6□□□□□ -0.55
CNTN4-202ENST00000397461 DDX10Q13206 875 aaKnown RBP11.6□□□□□ -0.55
CNTN4-202ENST00000397461 HNRNPUQ00839 825 aaKnown RBP eCLIP11.58□□□□□ -0.56
CNTN4-202ENST00000397461 CCDC180Q9P1Z9 1646 aa11.57□□□□□ -0.56
CNTN4-202ENST00000397461 NPM2Q86SE8 214 aaKnown RBP11.56□□□□□ -0.56
CNTN4-202ENST00000397461 FAM9BQ8IZU0 186 aa11.55□□□□□ -0.56
CNTN4-202ENST00000397461 CHIC2Q9UKJ5 165 aa11.54□□□□□ -0.56
CNTN4-202ENST00000397461 CHGAP10645 457 aaKnown RBP11.51□□□□□ -0.57
CNTN4-202ENST00000397461 SALL2Q9Y467 1007 aaPredicted RBP11.48□□□□□ -0.57
CNTN4-202ENST00000397461 CLIP1P30622 1438 aa11.48□□□□□ -0.57
CNTN4-202ENST00000397461 TMC1Q8TDI8 760 aa11.48□□□□□ -0.57
CNTN4-202ENST00000397461 MTUS2Q5JR59 1369 aa11.47□□□□□ -0.57
CNTN4-202ENST00000397461 MIER1Q8N108 512 aa11.46□□□□□ -0.58
CNTN4-202ENST00000397461 GRWD1Q9BQ67 446 aaKnown RBP eCLIP11.46□□□□□ -0.58
CNTN4-202ENST00000397461 STAG3Q9UJ98 1225 aa11.46□□□□□ -0.58
CNTN4-202ENST00000397461 TSPY4P0CV99 314 aa11.44□□□□□ -0.58
CNTN4-202ENST00000397461 TSPY10P0CW01 314 aa11.44□□□□□ -0.58
CNTN4-202ENST00000397461 MRS2Q9HD23 443 aa11.44□□□□□ -0.58
CNTN4-202ENST00000397461 CCDC136Q96JN2 1154 aa11.44□□□□□ -0.58
CNTN4-202ENST00000397461 UPF2Q9HAU5 1272 aaKnown RBP11.43□□□□□ -0.58
CNTN4-202ENST00000397461 KDM2AQ9Y2K7 1162 aa11.42□□□□□ -0.58
CNTN4-202ENST00000397461 MYO15BQ96JP2 1530 aa11.42□□□□□ -0.58
CNTN4-202ENST00000397461 HIRIP3Q9BW71 556 aaPredicted RBP11.42□□□□□ -0.58
CNTN4-202ENST00000397461 HSP90AA1P07900 732 aaKnown RBP11.41□□□□□ -0.58
CNTN4-202ENST00000397461 RSF1Q96T23 1441 aaPredicted RBP11.4□□□□□ -0.58
CNTN4-202ENST00000397461 SCAF1Q9H7N4 1312 aaKnown RBP11.39□□□□□ -0.59
CNTN4-202ENST00000397461 PLPPR3Q6T4P5 718 aa11.39□□□□□ -0.59
CNTN4-202ENST00000397461 WDR43Q15061 677 aaKnown RBP eCLIP11.39□□□□□ -0.59
CNTN4-202ENST00000397461 EEA1Q15075 1411 aa11.39□□□□□ -0.59
CNTN4-202ENST00000397461 CEP162Q5TB80 1403 aa11.39□□□□□ -0.59
CNTN4-202ENST00000397461 GOLGA6L2Q8N9W4 650 aaPredicted RBP11.39□□□□□ -0.59
CNTN4-202ENST00000397461 EIF4G2P78344 907 aaKnown RBP eCLIP11.38□□□□□ -0.59
CNTN4-202ENST00000397461 GOLGA3Q08378 1498 aa11.37□□□□□ -0.59
CNTN4-202ENST00000397461 RRP7BPQ9NSQ0 103 aa11.37□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms