RNA–Protein interactions for RNA: ENST00000375398.6

SVIL-202, Transcript of supervillin, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene SVIL, Length 8,201 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SVIL-202ENST00000375398 PELP1Q8IZL8 1130 aaKnown RBP15.2■□□□□ 0.02
SVIL-202ENST00000375398 ERICH6Q7L0X2 663 aa14.86□□□□□ -0.03
SVIL-202ENST00000375398 MYT1Q01538 1121 aa14.73□□□□□ -0.05
SVIL-202ENST00000375398 DCAF8L2P0C7V8 631 aa14.72□□□□□ -0.05
SVIL-202ENST00000375398 CCER1Q8TC90 406 aaPredicted RBP14.49□□□□□ -0.09
SVIL-202ENST00000375398 EHMT2Q96KQ7 1210 aa14.43□□□□□ -0.1
SVIL-202ENST00000375398 CENPBP07199 599 aaPredicted RBP14.25□□□□□ -0.13
SVIL-202ENST00000375398 SUPT5HO00267 1087 aaKnown RBP14.19□□□□□ -0.14
SVIL-202ENST00000375398 YTHDC1Q96MU7 727 aaKnown RBP14.05□□□□□ -0.16
SVIL-202ENST00000375398 TTBK1Q5TCY1 1321 aaPredicted RBP14.02□□□□□ -0.16
SVIL-202ENST00000375398 NEFLP07196 543 aa14.01□□□□□ -0.17
SVIL-202ENST00000375398 PCGF6Q9BYE7 350 aa13.98□□□□□ -0.17
SVIL-202ENST00000375398 DAXXQ9UER7 740 aaPredicted RBP13.92□□□□□ -0.18
SVIL-202ENST00000375398 APLP2Q06481 763 aa13.91□□□□□ -0.18
SVIL-202ENST00000375398 RTL5Q5HYW3 569 aaPredicted RBP13.65□□□□□ -0.22
SVIL-202ENST00000375398 ZEB1P37275 1124 aaPredicted RBP13.64□□□□□ -0.23
SVIL-202ENST00000375398 SHROOM4Q9ULL8 1493 aa13.6□□□□□ -0.23
SVIL-202ENST00000375398 FAM9AQ8IZU1 332 aaPredicted RBP13.59□□□□□ -0.23
SVIL-202ENST00000375398 ZNF316A6NFI3 1004 aaPredicted RBP13.56□□□□□ -0.24
SVIL-202ENST00000375398 RANGAP1P46060 587 aaPredicted RBP13.53□□□□□ -0.24
SVIL-202ENST00000375398 EIF5BO60841 1220 aaKnown RBP13.45□□□□□ -0.26
SVIL-202ENST00000375398 ATP1B4Q9UN42 357 aaPredicted RBP13.42□□□□□ -0.26
SVIL-202ENST00000375398 CNGB1Q14028 1251 aaPredicted RBP13.38□□□□□ -0.27
SVIL-202ENST00000375398 CLSPNQ9HAW4 1339 aa13.37□□□□□ -0.27
SVIL-202ENST00000375398 POLR3GLQ9BT43 218 aa13.35□□□□□ -0.27
SVIL-202ENST00000375398 PPARGC1BQ86YN6 1023 aaKnown RBP13.24□□□□□ -0.29
SVIL-202ENST00000375398 GLIPR1L2Q4G1C9 344 aa13.22□□□□□ -0.29
SVIL-202ENST00000375398 BCANQ96GW7 911 aa13.19□□□□□ -0.3
SVIL-202ENST00000375398 HRCP23327 699 aa13.17□□□□□ -0.3
SVIL-202ENST00000375398 SLC4A1APQ9BWU0 796 aaKnown RBP13.06□□□□□ -0.32
SVIL-202ENST00000375398 BCL11AQ9H165 835 aa13.06□□□□□ -0.32
SVIL-202ENST00000375398 GTF3C3Q9Y5Q9 886 aa13.05□□□□□ -0.32
SVIL-202ENST00000375398 CDK11AQ9UQ88 783 aaPredicted RBP13.03□□□□□ -0.32
SVIL-202ENST00000375398 UBTFP17480 764 aaKnown RBP13.02□□□□□ -0.32
SVIL-202ENST00000375398 ITGAEP38570 1179 aa12.98□□□□□ -0.33
SVIL-202ENST00000375398 DIEXFQ68CQ4 756 aaKnown RBP12.95□□□□□ -0.34
SVIL-202ENST00000375398 CHIC1Q5VXU3 224 aa12.93□□□□□ -0.34
SVIL-202ENST00000375398 TRIM41Q8WV44 630 aa12.93□□□□□ -0.34
SVIL-202ENST00000375398 NPM2Q86SE8 214 aaKnown RBP12.92□□□□□ -0.34
SVIL-202ENST00000375398 TRIM26Q12899 539 aaPredicted RBP12.92□□□□□ -0.34
SVIL-202ENST00000375398 ANP32BQ92688 251 aaKnown RBP12.91□□□□□ -0.34
SVIL-202ENST00000375398 ARXQ96QS3 562 aa12.88□□□□□ -0.35
SVIL-202ENST00000375398 ANP32AP39687 249 aaKnown RBP12.88□□□□□ -0.35
SVIL-202ENST00000375398 ZBTB47Q9UFB7 747 aaPredicted RBP12.88□□□□□ -0.35
SVIL-202ENST00000375398 MYT1LQ9UL68 1186 aa12.87□□□□□ -0.35
SVIL-202ENST00000375398 NBR1Q14596 966 aa12.84□□□□□ -0.35
SVIL-202ENST00000375398 HNRNPUL2Q1KMD3 747 aaKnown RBP12.79□□□□□ -0.36
SVIL-202ENST00000375398 AMER1Q5JTC6 1135 aaPredicted RBP12.77□□□□□ -0.37
SVIL-202ENST00000375398 SLC24A1O60721 1099 aa12.76□□□□□ -0.37
SVIL-202ENST00000375398 CANXP27824 592 aaKnown RBP12.73□□□□□ -0.37
SVIL-202ENST00000375398 HSP90AA1P07900 732 aaKnown RBP12.73□□□□□ -0.37
SVIL-202ENST00000375398 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP12.72□□□□□ -0.37
SVIL-202ENST00000375398 TNNT2P45379 298 aaPredicted RBP12.69□□□□□ -0.38
SVIL-202ENST00000375398 NISCHQ9Y2I1 1504 aa12.67□□□□□ -0.38
SVIL-202ENST00000375398 CDK11BP21127 795 aaKnown RBP12.62□□□□□ -0.39
SVIL-202ENST00000375398 ANP32CO43423 234 aa12.6□□□□□ -0.39
SVIL-202ENST00000375398 RTN4Q9NQC3 1192 aaKnown RBP12.58□□□□□ -0.4
SVIL-202ENST00000375398 ACIN1Q9UKV3 1341 aaKnown RBP12.57□□□□□ -0.4
SVIL-202ENST00000375398 NEUROD1Q13562 356 aa12.56□□□□□ -0.4
SVIL-202ENST00000375398 FKBP8Q14318 412 aa12.53□□□□□ -0.4
SVIL-202ENST00000375398 TRIM44Q96DX7 344 aaPredicted RBP12.5□□□□□ -0.41
SVIL-202ENST00000375398 UPF2Q9HAU5 1272 aaKnown RBP12.5□□□□□ -0.41
SVIL-202ENST00000375398 LOC105371045A0A1W2PR82 267 aa12.5□□□□□ -0.41
SVIL-202ENST00000375398 NAP1L5Q96NT1 182 aaPredicted RBP12.48□□□□□ -0.41
SVIL-202ENST00000375398 ZNF326Q5BKZ1 582 aaKnown RBP12.47□□□□□ -0.41
SVIL-202ENST00000375398 DNTTIP2Q5QJE6 756 aaKnown RBP12.44□□□□□ -0.42
SVIL-202ENST00000375398 TRIM52Q96A61 297 aa12.41□□□□□ -0.42
SVIL-202ENST00000375398 FAM50AQ14320 339 aaKnown RBP12.39□□□□□ -0.43
SVIL-202ENST00000375398 NEFMP07197 916 aa12.37□□□□□ -0.43
SVIL-202ENST00000375398 TPRNQ4KMQ1 711 aa12.35□□□□□ -0.43
SVIL-202ENST00000375398 PTMAP06454 111 aaKnown RBP12.35□□□□□ -0.43
SVIL-202ENST00000375398 ARID4BQ4LE39 1312 aaPredicted RBP12.35□□□□□ -0.43
SVIL-202ENST00000375398 SALL2Q9Y467 1007 aaPredicted RBP12.32□□□□□ -0.44
SVIL-202ENST00000375398 NCLP19338 710 aaKnown RBP12.3□□□□□ -0.44
SVIL-202ENST00000375398 TULP1O00294 542 aaPredicted RBP12.3□□□□□ -0.44
SVIL-202ENST00000375398 CCDC136Q96JN2 1154 aa12.3□□□□□ -0.44
SVIL-202ENST00000375398 ZBTB4Q9P1Z0 1013 aaPredicted RBP12.28□□□□□ -0.44
SVIL-202ENST00000375398 ERICH6BQ5W0A0 696 aa12.28□□□□□ -0.44
SVIL-202ENST00000375398 ANP32EQ9BTT0 268 aa12.27□□□□□ -0.45
SVIL-202ENST00000375398 ARID3AQ99856 593 aa12.27□□□□□ -0.45
SVIL-202ENST00000375398 IRX6P78412 446 aaPredicted RBP12.26□□□□□ -0.45
SVIL-202ENST00000375398 HNRNPUQ00839 825 aaKnown RBP eCLIP12.24□□□□□ -0.45
SVIL-202ENST00000375398 SCAF1Q9H7N4 1312 aaKnown RBP12.22□□□□□ -0.45
SVIL-202ENST00000375398 FAM9BQ8IZU0 186 aa12.22□□□□□ -0.45
SVIL-202ENST00000375398 PLCB2Q00722 1185 aa12.21□□□□□ -0.46
SVIL-202ENST00000375398 TNNT3P45378 269 aaPredicted RBP12.18□□□□□ -0.46
SVIL-202ENST00000375398 NCBP3Q53F19 620 aaKnown RBP12.18□□□□□ -0.46
SVIL-202ENST00000375398 GOLGA6L22H0YM25 854 aa12.17□□□□□ -0.46
SVIL-202ENST00000375398 BECN1Q14457 450 aa12.17□□□□□ -0.46
SVIL-202ENST00000375398 ZRSR1Q15695 479 aaKnown RBP12.17□□□□□ -0.46
SVIL-202ENST00000375398 GOLGA6L2Q8N9W4 650 aaPredicted RBP12.17□□□□□ -0.46
SVIL-202ENST00000375398 ZBTB7CA1YPR0 619 aa12.16□□□□□ -0.46
SVIL-202ENST00000375398 LAS1LQ9Y4W2 734 aaKnown RBP12.16□□□□□ -0.46
SVIL-202ENST00000375398 DDRGK1Q96HY6 314 aa12.15□□□□□ -0.46
SVIL-202ENST00000375398 TAOK2Q9UL54 1235 aa12.1□□□□□ -0.47
SVIL-202ENST00000375398 CHAF1AQ13111 956 aaPredicted RBP12.07□□□□□ -0.48
SVIL-202ENST00000375398 CALRP27797 417 aaKnown RBP12.07□□□□□ -0.48
SVIL-202ENST00000375398 DEKP35659 375 aaKnown RBP12.06□□□□□ -0.48
SVIL-202ENST00000375398 MSNP26038 577 aaKnown RBP12.06□□□□□ -0.48
SVIL-202ENST00000375398 DDX10Q13206 875 aaKnown RBP12.04□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 34.5 ms