Protein–RNA interactions for Protein: Q9Y5E1

PCDHB9, Protocadherin beta-9, humanhuman

Predictions only

Length 797 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB9Q9Y5E1 SHANK1-203ENST00000391813 4785 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
PCDHB9Q9Y5E1 HTR1E-201ENST00000305344 2052 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
PCDHB9Q9Y5E1 MED25-212ENST00000618715 1467 ntTSL 5 BASIC19.34■□□□□ 0.69
PCDHB9Q9Y5E1 RASEF-202ENST00000376447 5576 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
PCDHB9Q9Y5E1 DUSP1-201ENST00000239223 2019 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
PCDHB9Q9Y5E1 YPEL5-205ENST00000402708 1735 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
PCDHB9Q9Y5E1 LIMS2-204ENST00000409286 1678 ntTSL 2 BASIC19.33■□□□□ 0.69
PCDHB9Q9Y5E1 SPNS1-201ENST00000311008 2208 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
PCDHB9Q9Y5E1 NECAB3-202ENST00000375238 1942 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
PCDHB9Q9Y5E1 EFHD2-201ENST00000375980 2419 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
PCDHB9Q9Y5E1 OTOP2-201ENST00000331427 2147 ntAPPRIS P1 TSL 5 BASIC19.33■□□□□ 0.69
PCDHB9Q9Y5E1 MFSD1-219ENST00000622669 2361 ntTSL 1 (best) BASIC19.33■□□□□ 0.69
PCDHB9Q9Y5E1 NKX2-1-202ENST00000498187 2338 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
PCDHB9Q9Y5E1 APAF1-210ENST00000551964 5444 ntAPPRIS P4 TSL 1 (best) BASIC19.33■□□□□ 0.69
PCDHB9Q9Y5E1 SLC9A6-202ENST00000370698 4631 ntTSL 1 (best) BASIC19.33■□□□□ 0.69
PCDHB9Q9Y5E1 HLA-DRB1-201ENST00000360004 1229 ntAPPRIS P1 BASIC19.33■□□□□ 0.68
PCDHB9Q9Y5E1 FAM207BP-201ENST00000447172 505 ntBASIC19.33■□□□□ 0.68
PCDHB9Q9Y5E1 ECEL1P2-202ENST00000465689 757 ntBASIC19.33■□□□□ 0.68
PCDHB9Q9Y5E1 EGLN1P1-201ENST00000531623 762 ntBASIC19.33■□□□□ 0.68
PCDHB9Q9Y5E1 LTBR-211ENST00000543190 785 ntTSL 3 BASIC19.33■□□□□ 0.68
PCDHB9Q9Y5E1 ISOC2-201ENST00000085068 1122 ntTSL 2 BASIC19.33■□□□□ 0.68
PCDHB9Q9Y5E1 ACAA1-201ENST00000301810 1540 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
PCDHB9Q9Y5E1 ZIM2-208ENST00000629319 2253 ntAPPRIS P1 TSL 5 BASIC19.33■□□□□ 0.68
PCDHB9Q9Y5E1 MON1A-202ENST00000417270 2527 ntAPPRIS ALT2 TSL 5 BASIC19.33■□□□□ 0.68
PCDHB9Q9Y5E1 RTN4-207ENST00000402434 1456 ntTSL 5 BASIC19.33■□□□□ 0.68
PCDHB9Q9Y5E1 KCNQ5-202ENST00000355194 6566 ntAPPRIS ALT1 TSL 5 BASIC19.33■□□□□ 0.68
PCDHB9Q9Y5E1 KCNQ5-206ENST00000402622 6596 ntAPPRIS ALT2 TSL 5 BASIC19.33■□□□□ 0.68
PCDHB9Q9Y5E1 BIRC2-206ENST00000530675 1927 ntTSL 2 BASIC19.33■□□□□ 0.68
PCDHB9Q9Y5E1 AGFG2-201ENST00000300176 4796 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
PCDHB9Q9Y5E1 TMEFF1-201ENST00000374879 2611 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
PCDHB9Q9Y5E1 NRL-206ENST00000561028 2103 ntAPPRIS P1 TSL 2 BASIC19.33■□□□□ 0.68
PCDHB9Q9Y5E1 RBM26-202ENST00000438724 5152 ntAPPRIS ALT1 TSL 1 (best) BASIC19.33■□□□□ 0.68
PCDHB9Q9Y5E1 ASNS-206ENST00000437628 1638 ntTSL 2 BASIC19.33■□□□□ 0.68
PCDHB9Q9Y5E1 JMJD4-202ENST00000438896 2502 ntTSL 2 BASIC19.32■□□□□ 0.68
PCDHB9Q9Y5E1 SERGEF-201ENST00000265965 1566 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
PCDHB9Q9Y5E1 HS2ST1-202ENST00000370551 1585 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
PCDHB9Q9Y5E1 ACAA1-209ENST00000450296 1570 ntTSL 5 BASIC19.32■□□□□ 0.68
PCDHB9Q9Y5E1 GAS2L1-208ENST00000616432 2925 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
PCDHB9Q9Y5E1 ZNF843-203ENST00000618063 1765 ntAPPRIS P2 TSL 1 (best) BASIC19.32■□□□□ 0.68
PCDHB9Q9Y5E1 ANXA8-208ENST00000611843 2174 ntTSL 2 BASIC19.32■□□□□ 0.68
PCDHB9Q9Y5E1 ZNF324B-202ENST00000545523 2368 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
PCDHB9Q9Y5E1 FBXL18-203ENST00000453700 1932 ntAPPRIS ALT2 TSL 1 (best) BASIC19.32■□□□□ 0.68
PCDHB9Q9Y5E1 POMZP3-201ENST00000275569 1259 ntTSL 2 BASIC19.32■□□□□ 0.68
PCDHB9Q9Y5E1 SYNE4-202ENST00000340477 1004 ntAPPRIS ALT2 TSL 1 (best) BASIC19.32■□□□□ 0.68
PCDHB9Q9Y5E1 ST8SIA1-202ENST00000381424 1036 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
PCDHB9Q9Y5E1 GPM6B-204ENST00000398361 1033 ntTSL 2 BASIC19.32■□□□□ 0.68
PCDHB9Q9Y5E1 UBE2C-206ENST00000405520 641 ntTSL 2 BASIC19.32■□□□□ 0.68
PCDHB9Q9Y5E1 SLC25A48-202ENST00000412661 1148 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
PCDHB9Q9Y5E1 SLC25A48-204ENST00000433282 1111 ntAPPRIS P1 TSL 5 BASIC19.32■□□□□ 0.68
PCDHB9Q9Y5E1 AC005056.1-201ENST00000435932 532 ntTSL 4 BASIC19.32■□□□□ 0.68
PCDHB9Q9Y5E1 AL136307.1-201ENST00000454882 411 ntTSL 2 BASIC19.32■□□□□ 0.68
PCDHB9Q9Y5E1 WDR88-203ENST00000592765 651 ntTSL 5 BASIC19.32■□□□□ 0.68
PCDHB9Q9Y5E1 AP000692.2-201ENST00000608391 879 ntBASIC19.32■□□□□ 0.68
PCDHB9Q9Y5E1 DGCR10-201ENST00000609839 495 ntBASIC19.32■□□□□ 0.68
PCDHB9Q9Y5E1 UBE2C-208ENST00000617055 705 ntTSL 3 BASIC19.32■□□□□ 0.68
PCDHB9Q9Y5E1 AC006011.2-201ENST00000621313 1158 ntBASIC19.32■□□□□ 0.68
PCDHB9Q9Y5E1 C2CD2-202ENST00000380486 6345 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
PCDHB9Q9Y5E1 IL6R-208ENST00000622330 1496 ntAPPRIS ALT2 TSL 1 (best) BASIC19.32■□□□□ 0.68
PCDHB9Q9Y5E1 FAM131A-204ENST00000418281 1664 ntTSL 5 BASIC19.32■□□□□ 0.68
PCDHB9Q9Y5E1 AC008105.1-201ENST00000587534 2003 ntTSL 2 BASIC19.32■□□□□ 0.68
PCDHB9Q9Y5E1 FHL1-219ENST00000618438 2178 ntTSL 3 BASIC19.32■□□□□ 0.68
PCDHB9Q9Y5E1 STXBP6-203ENST00000419632 1970 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
PCDHB9Q9Y5E1 KREMEN2-206ENST00000575885 1798 ntTSL 2 BASIC19.32■□□□□ 0.68
PCDHB9Q9Y5E1 SLC25A39-202ENST00000377095 1565 ntAPPRIS ALT1 TSL 1 (best) BASIC19.32■□□□□ 0.68
PCDHB9Q9Y5E1 C18orf21-205ENST00000592875 1581 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
PCDHB9Q9Y5E1 AC044802.1-201ENST00000501143 2894 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
PCDHB9Q9Y5E1 AP001922.1-201ENST00000499390 1504 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
PCDHB9Q9Y5E1 SEC11C-202ENST00000509791 2054 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
PCDHB9Q9Y5E1 AC005332.7-201ENST00000614046 2005 ntBASIC19.31■□□□□ 0.68
PCDHB9Q9Y5E1 TMEM234-201ENST00000309777 1082 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
PCDHB9Q9Y5E1 LRRC23-202ENST00000323702 1208 ntAPPRIS ALT2 TSL 1 (best) BASIC19.31■□□□□ 0.68
PCDHB9Q9Y5E1 PRICKLE4-202ENST00000394260 1035 ntAPPRIS ALT2 TSL 2 BASIC19.31■□□□□ 0.68
PCDHB9Q9Y5E1 PRICKLE4-203ENST00000394263 1155 ntAPPRIS P2 TSL 5 BASIC19.31■□□□□ 0.68
PCDHB9Q9Y5E1 AC073343.2-202ENST00000430844 532 ntTSL 4 BASIC19.31■□□□□ 0.68
PCDHB9Q9Y5E1 BX664615.1-201ENST00000443558 458 ntBASIC19.31■□□□□ 0.68
PCDHB9Q9Y5E1 AC003982.1-201ENST00000477404 484 ntTSL 2 BASIC19.31■□□□□ 0.68
PCDHB9Q9Y5E1 TNFSF13-208ENST00000483039 959 ntTSL 2 BASIC19.31■□□□□ 0.68
PCDHB9Q9Y5E1 SLC25A1P4-201ENST00000567977 778 ntBASIC19.31■□□□□ 0.68
PCDHB9Q9Y5E1 METRN-205ENST00000568415 612 ntAPPRIS ALT2 TSL 3 BASIC19.31■□□□□ 0.68
PCDHB9Q9Y5E1 MARCH8-201ENST00000319836 5272 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
PCDHB9Q9Y5E1 ZDHHC5-201ENST00000287169 4666 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
PCDHB9Q9Y5E1 ECE1-205ENST00000436918 2328 ntTSL 2 BASIC19.31■□□□□ 0.68
PCDHB9Q9Y5E1 SMIM4-203ENST00000477703 1770 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
PCDHB9Q9Y5E1 P3H4-202ENST00000393928 2601 ntAPPRIS P2 TSL 1 (best) BASIC19.31■□□□□ 0.68
PCDHB9Q9Y5E1 PSMD8-210ENST00000620216 1538 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
PCDHB9Q9Y5E1 TEX21P-204ENST00000641479 1693 ntBASIC19.3■□□□□ 0.68
PCDHB9Q9Y5E1 PFKFB3-204ENST00000379785 2181 ntTSL 5 BASIC19.3■□□□□ 0.68
PCDHB9Q9Y5E1 TSR1-201ENST00000301364 5188 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
PCDHB9Q9Y5E1 CACNA1I-204ENST00000407673 5952 ntAPPRIS ALT2 TSL 1 (best) BASIC19.3■□□□□ 0.68
PCDHB9Q9Y5E1 NDUFB9-206ENST00000522532 1319 ntTSL 2 BASIC19.3■□□□□ 0.68
PCDHB9Q9Y5E1 HSD11B1L-221ENST00000583928 1319 ntTSL 5 BASIC19.3■□□□□ 0.68
PCDHB9Q9Y5E1 GNB1-209ENST00000610897 3145 ntAPPRIS P1 TSL 5 BASIC19.3■□□□□ 0.68
PCDHB9Q9Y5E1 CASTOR1-202ENST00000407689 1623 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
PCDHB9Q9Y5E1 MINOS1-NBL1-204ENST00000602662 1623 ntAPPRIS P1 TSL 2 BASIC19.3■□□□□ 0.68
PCDHB9Q9Y5E1 PCMT1-203ENST00000367384 1938 ntAPPRIS ALT2 TSL 1 (best) BASIC19.3■□□□□ 0.68
PCDHB9Q9Y5E1 DUSP23-203ENST00000368109 729 ntAPPRIS P1 TSL 2 BASIC19.3■□□□□ 0.68
PCDHB9Q9Y5E1 AC097488.1-201ENST00000507834 756 ntBASIC19.3■□□□□ 0.68
PCDHB9Q9Y5E1 CENPX-206ENST00000580435 710 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
PCDHB9Q9Y5E1 CYB561D2-210ENST00000607121 1004 ntTSL 2 BASIC19.3■□□□□ 0.68
PCDHB9Q9Y5E1 SCPEP1-216ENST00000631024 444 ntTSL 5 BASIC19.3■□□□□ 0.68
Retrieved 100 of 98,524 protein–RNA pairs in 23.9 ms