Protein–RNA interactions for Protein: Q9Y2H6

FNDC3A, Fibronectin type-III domain-containing protein 3A, humanhuman

Known RBP Predictions only

Length 1,198 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FNDC3AQ9Y2H6 ARFRP1-208ENST00000612256 2974 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
FNDC3AQ9Y2H6 EEF1A2-201ENST00000217182 2006 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
FNDC3AQ9Y2H6 SLC38A11-203ENST00000409149 1621 ntAPPRIS P2 TSL 2 BASIC19.44■□□□□ 0.7
FNDC3AQ9Y2H6 GPR139-202ENST00000570682 1613 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
FNDC3AQ9Y2H6 KRT8P8-201ENST00000434750 1448 ntBASIC19.44■□□□□ 0.7
FNDC3AQ9Y2H6 BLACE-201ENST00000378120 2456 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
FNDC3AQ9Y2H6 GMPPA-213ENST00000622191 1473 ntTSL 5 BASIC19.44■□□□□ 0.7
FNDC3AQ9Y2H6 POMZP3-201ENST00000275569 1259 ntTSL 2 BASIC19.44■□□□□ 0.7
FNDC3AQ9Y2H6 NUDT8-201ENST00000301490 809 ntAPPRIS P3 TSL 1 (best) BASIC19.44■□□□□ 0.7
FNDC3AQ9Y2H6 C6orf48-206ENST00000375641 602 ntAPPRIS P1 TSL 2 BASIC19.44■□□□□ 0.7
FNDC3AQ9Y2H6 FAM182B-202ENST00000376404 456 ntAPPRIS ALT2 BASIC19.44■□□□□ 0.7
FNDC3AQ9Y2H6 TMEM88B-201ENST00000378821 492 ntAPPRIS P1 TSL 2 BASIC19.44■□□□□ 0.7
FNDC3AQ9Y2H6 AL445645.1-201ENST00000451318 1019 ntTSL 2 BASIC19.44■□□□□ 0.7
FNDC3AQ9Y2H6 Z98884.1-201ENST00000451646 830 ntTSL 3 BASIC19.44■□□□□ 0.7
FNDC3AQ9Y2H6 ASPHD1-203ENST00000483405 1115 ntAPPRIS ALT2 TSL 3 BASIC19.44■□□□□ 0.7
FNDC3AQ9Y2H6 CIRBP-217ENST00000588230 1013 ntTSL 5 BASIC19.44■□□□□ 0.7
FNDC3AQ9Y2H6 SCPEP1-216ENST00000631024 444 ntTSL 5 BASIC19.44■□□□□ 0.7
FNDC3AQ9Y2H6 LAPTM4B-204ENST00000619747 2758 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
FNDC3AQ9Y2H6 SLC11A2-208ENST00000546743 1740 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
FNDC3AQ9Y2H6 SDHA-201ENST00000264932 2390 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
FNDC3AQ9Y2H6 MFSD1-219ENST00000622669 2361 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
FNDC3AQ9Y2H6 AC093627.4-201ENST00000484550 5008 ntTSL 2 BASIC19.44■□□□□ 0.7
FNDC3AQ9Y2H6 SMARCC2-203ENST00000394023 4271 ntAPPRIS ALT2 TSL 1 (best) BASIC19.44■□□□□ 0.7
FNDC3AQ9Y2H6 SLC6A11-202ENST00000454147 2794 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
FNDC3AQ9Y2H6 RBPJL-203ENST00000372743 1623 ntAPPRIS ALT1 TSL 1 (best) BASIC19.43■□□□□ 0.7
FNDC3AQ9Y2H6 BACE2-201ENST00000328735 2824 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
FNDC3AQ9Y2H6 PIGQ-209ENST00000470411 2112 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
FNDC3AQ9Y2H6 HAND2-AS1-237ENST00000616485 2420 ntTSL 2 BASIC19.43■□□□□ 0.7
FNDC3AQ9Y2H6 L2HGDH-203ENST00000421284 1958 ntAPPRIS P1 TSL 2 BASIC19.43■□□□□ 0.7
FNDC3AQ9Y2H6 ZNF470-201ENST00000330619 7151 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
FNDC3AQ9Y2H6 CTBP2-205ENST00000411419 2036 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
FNDC3AQ9Y2H6 THTPA-202ENST00000404535 1779 ntAPPRIS P1 TSL 2 BASIC19.43■□□□□ 0.7
FNDC3AQ9Y2H6 HRAS-201ENST00000311189 894 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
FNDC3AQ9Y2H6 MCF2L-207ENST00000397024 490 ntTSL 5 BASIC19.43■□□□□ 0.7
FNDC3AQ9Y2H6 MESTP1-201ENST00000404287 994 ntBASIC19.43■□□□□ 0.7
FNDC3AQ9Y2H6 AC004540.1-203ENST00000421862 907 ntTSL 5 BASIC19.43■□□□□ 0.7
FNDC3AQ9Y2H6 HIGD1A-204ENST00000452906 585 ntTSL 2 BASIC19.43■□□□□ 0.7
FNDC3AQ9Y2H6 AL031985.4-201ENST00000642138 673 ntBASIC19.43■□□□□ 0.7
FNDC3AQ9Y2H6 FAM3A-215ENST00000447601 1800 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
FNDC3AQ9Y2H6 PRKAR2A-206ENST00000454963 1849 ntAPPRIS P1 TSL 2 BASIC19.43■□□□□ 0.7
FNDC3AQ9Y2H6 CDC42EP1-201ENST00000249014 2181 ntAPPRIS P2 TSL 1 (best) BASIC19.43■□□□□ 0.7
FNDC3AQ9Y2H6 CSF1-203ENST00000369801 1364 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
FNDC3AQ9Y2H6 GTF3A-201ENST00000381140 1383 ntAPPRIS ALT2 TSL 1 (best) BASIC19.43■□□□□ 0.7
FNDC3AQ9Y2H6 CEMP1-202ENST00000567119 1374 ntAPPRIS P2 BASIC19.43■□□□□ 0.7
FNDC3AQ9Y2H6 TOM1L1-202ENST00000445275 2228 ntTSL 2 BASIC19.43■□□□□ 0.7
FNDC3AQ9Y2H6 TFRC-202ENST00000392396 5032 ntAPPRIS P3 TSL 1 (best) BASIC19.43■□□□□ 0.7
FNDC3AQ9Y2H6 EOMES-202ENST00000449599 2829 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
FNDC3AQ9Y2H6 TMEM234-203ENST00000373593 1411 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
FNDC3AQ9Y2H6 FGFR3-205ENST00000440486 4287 ntAPPRIS P3 TSL 5 BASIC19.42■□□□□ 0.7
FNDC3AQ9Y2H6 TWF2-203ENST00000499914 1440 ntTSL 5 BASIC19.42■□□□□ 0.7
FNDC3AQ9Y2H6 LIMS2-207ENST00000409808 2315 ntAPPRIS ALT1 TSL 5 BASIC19.42■□□□□ 0.7
FNDC3AQ9Y2H6 RAB11FIP2-202ENST00000369199 6119 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
FNDC3AQ9Y2H6 CHAC1-205ENST00000617961 1498 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
FNDC3AQ9Y2H6 SPOPL-201ENST00000280098 6025 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
FNDC3AQ9Y2H6 BMP8B-201ENST00000372827 4822 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
FNDC3AQ9Y2H6 RARA-201ENST00000254066 2414 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
FNDC3AQ9Y2H6 ARHGEF28-203ENST00000426542 6118 ntAPPRIS ALT2 TSL 1 (best) BASIC19.42■□□□□ 0.7
FNDC3AQ9Y2H6 FAM46A-203ENST00000369756 5537 ntAPPRIS ALT2 TSL 1 (best) BASIC19.42■□□□□ 0.7
FNDC3AQ9Y2H6 DNASE1L2-203ENST00000564065 2194 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
FNDC3AQ9Y2H6 NOMO1-201ENST00000287667 4355 ntAPPRIS P2 TSL 1 (best) BASIC19.42■□□□□ 0.7
FNDC3AQ9Y2H6 AC092835.1-201ENST00000425953 1850 ntAPPRIS P1 TSL 5 BASIC19.42■□□□□ 0.7
FNDC3AQ9Y2H6 ARL5A-201ENST00000295087 5326 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
FNDC3AQ9Y2H6 ISLR2-204ENST00000453268 2812 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
FNDC3AQ9Y2H6 SKP2-208ENST00000546211 1589 ntTSL 5 BASIC19.42■□□□□ 0.7
FNDC3AQ9Y2H6 VSTM2A-203ENST00000404951 2521 ntTSL 5 BASIC19.42■□□□□ 0.7
FNDC3AQ9Y2H6 HTR7P1-202ENST00000624664 4411 ntBASIC19.42■□□□□ 0.7
FNDC3AQ9Y2H6 RELB-202ENST00000505236 2219 ntAPPRIS ALT2 TSL 5 BASIC19.42■□□□□ 0.7
FNDC3AQ9Y2H6 RRAS-201ENST00000246792 1044 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
FNDC3AQ9Y2H6 TMEM185A-204ENST00000507237 903 ntTSL 2 BASIC19.42■□□□□ 0.7
FNDC3AQ9Y2H6 BAALC-AS1-207ENST00000522856 594 ntTSL 3 BASIC19.42■□□□□ 0.7
FNDC3AQ9Y2H6 AC087388.1-201ENST00000571370 1112 ntBASIC19.42■□□□□ 0.7
FNDC3AQ9Y2H6 BDKRB1-204ENST00000611804 1085 ntAPPRIS P1 BASIC19.42■□□□□ 0.7
FNDC3AQ9Y2H6 CLN6-221ENST00000637494 765 ntTSL 5 BASIC19.42■□□□□ 0.7
FNDC3AQ9Y2H6 PHLDB3-201ENST00000292140 2591 ntAPPRIS P1 TSL 5 BASIC19.42■□□□□ 0.7
FNDC3AQ9Y2H6 NETO1-207ENST00000583169 2357 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
FNDC3AQ9Y2H6 BCL2-202ENST00000398117 7461 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
FNDC3AQ9Y2H6 FAM187A-202ENST00000412523 1748 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
FNDC3AQ9Y2H6 TP73-202ENST00000354437 2140 ntTSL 5 BASIC19.42■□□□□ 0.7
FNDC3AQ9Y2H6 AC093484.2-201ENST00000580996 2166 ntBASIC19.42■□□□□ 0.7
FNDC3AQ9Y2H6 CFAP46-201ENST00000368585 1825 ntAPPRIS ALT2 TSL 2 BASIC19.41■□□□□ 0.7
FNDC3AQ9Y2H6 N4BP3-201ENST00000274605 6080 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
FNDC3AQ9Y2H6 SNAPC2-201ENST00000221573 1542 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
FNDC3AQ9Y2H6 MRPL2-202ENST00000388752 1588 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
FNDC3AQ9Y2H6 PPM1H-201ENST00000228705 6353 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
FNDC3AQ9Y2H6 HSCB-201ENST00000216027 1114 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
FNDC3AQ9Y2H6 FAM212A-201ENST00000333323 1040 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
FNDC3AQ9Y2H6 COQ10B-203ENST00000409398 879 ntTSL 3 BASIC19.41■□□□□ 0.7
FNDC3AQ9Y2H6 AL513320.1-201ENST00000435049 622 ntTSL 3 BASIC19.41■□□□□ 0.7
FNDC3AQ9Y2H6 LY6E-214ENST00000522971 857 ntAPPRIS P2 TSL 2 BASIC19.41■□□□□ 0.7
FNDC3AQ9Y2H6 C1QL1P1-201ENST00000568105 661 ntBASIC19.41■□□□□ 0.7
FNDC3AQ9Y2H6 WWOX-216ENST00000569818 525 ntBASIC19.41■□□□□ 0.7
FNDC3AQ9Y2H6 CALM3-208ENST00000596362 1203 ntAPPRIS P1 TSL 2 BASIC19.41■□□□□ 0.7
FNDC3AQ9Y2H6 ABBA01031674.1-201ENST00000635145 728 ntBASIC19.41■□□□□ 0.7
FNDC3AQ9Y2H6 ZBTB4-201ENST00000311403 5956 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
FNDC3AQ9Y2H6 MICU3-201ENST00000318063 3992 ntAPPRIS P2 TSL 1 (best) BASIC19.41■□□□□ 0.7
FNDC3AQ9Y2H6 ST3GAL3-204ENST00000335430 1805 ntTSL 5 BASIC19.41■□□□□ 0.7
FNDC3AQ9Y2H6 CRTC1-204ENST00000601916 1834 ntTSL 5 BASIC19.41■□□□□ 0.7
FNDC3AQ9Y2H6 SOX15-201ENST00000250055 1396 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
FNDC3AQ9Y2H6 NCF1-201ENST00000289473 1396 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
FNDC3AQ9Y2H6 RAB11FIP2-201ENST00000355624 6061 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Retrieved 100 of 98,524 protein–RNA pairs in 25.7 ms