Protein–RNA interactions for Protein: Q9UJ98

STAG3, Cohesin subunit SA-3, humanhuman

Predictions only

Length 1,225 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
STAG3Q9UJ98 LINC02381-201ENST00000508564 1369 ntTSL 1 (best) BASIC27.35■■□□□ 1.97
STAG3Q9UJ98 DACH1-201ENST00000611519 4789 ntAPPRIS ALT2 TSL 1 (best) BASIC27.35■■□□□ 1.97
STAG3Q9UJ98 OTUB1-210ENST00000541478 1803 ntTSL 5 BASIC27.34■■□□□ 1.97
STAG3Q9UJ98 FAM43A-201ENST00000329759 2494 ntAPPRIS P1 BASIC27.34■■□□□ 1.97
STAG3Q9UJ98 STXBP2-202ENST00000414284 1859 ntAPPRIS ALT1 TSL 1 (best) BASIC27.34■■□□□ 1.97
STAG3Q9UJ98 TCF3-203ENST00000395423 2779 ntTSL 5 BASIC27.34■■□□□ 1.97
STAG3Q9UJ98 AL391807.1-203ENST00000604392 2365 ntBASIC27.34■■□□□ 1.97
STAG3Q9UJ98 MIR662-201ENST00000384847 95 ntBASIC27.34■■□□□ 1.97
STAG3Q9UJ98 ANAPC11-217ENST00000579978 575 ntAPPRIS P1 TSL 2 BASIC27.34■■□□□ 1.97
STAG3Q9UJ98 PTGIR-204ENST00000596260 1009 ntTSL 2 BASIC27.34■■□□□ 1.97
STAG3Q9UJ98 DEF8-228ENST00000610455 816 ntTSL 1 (best) BASIC27.34■■□□□ 1.97
STAG3Q9UJ98 SNX18-203ENST00000381410 5218 ntAPPRIS P1 TSL 1 (best) BASIC27.34■■□□□ 1.97
STAG3Q9UJ98 ZNF669-201ENST00000343381 1951 ntAPPRIS P3 TSL 1 (best) BASIC27.34■■□□□ 1.97
STAG3Q9UJ98 DYRK2-202ENST00000344096 8912 ntAPPRIS P4 TSL 1 (best) BASIC27.34■■□□□ 1.97
STAG3Q9UJ98 CSNK1D-203ENST00000392334 2047 ntAPPRIS ALT1 TSL 1 (best) BASIC27.34■■□□□ 1.97
STAG3Q9UJ98 RUNDC3B-207ENST00000493037 2020 ntAPPRIS ALT2 TSL 1 (best) BASIC27.34■■□□□ 1.97
STAG3Q9UJ98 FCER2-201ENST00000346664 1596 ntAPPRIS P2 TSL 1 (best) BASIC27.34■■□□□ 1.97
STAG3Q9UJ98 FCER2-205ENST00000597921 1560 ntAPPRIS P2 TSL 1 (best) BASIC27.34■■□□□ 1.97
STAG3Q9UJ98 ACBD4-201ENST00000321854 1806 ntAPPRIS P1 TSL 1 (best) BASIC27.34■■□□□ 1.97
STAG3Q9UJ98 ASL-205ENST00000395332 1622 ntAPPRIS P1 TSL 1 (best) BASIC27.34■■□□□ 1.97
STAG3Q9UJ98 MYOZ3-203ENST00000517768 1451 ntAPPRIS P1 TSL 1 (best) BASIC27.33■■□□□ 1.97
STAG3Q9UJ98 ELANE-201ENST00000263621 920 ntAPPRIS P1 TSL 1 (best) BASIC27.33■■□□□ 1.97
STAG3Q9UJ98 TSPY8-203ENST00000383005 435 ntTSL 5 BASIC27.33■■□□□ 1.97
STAG3Q9UJ98 LINC01237-203ENST00000430555 843 ntTSL 4 BASIC27.33■■□□□ 1.97
STAG3Q9UJ98 DRAXINP1-201ENST00000437611 948 ntBASIC27.33■■□□□ 1.97
STAG3Q9UJ98 LAT-211ENST00000566177 786 ntAPPRIS ALT2 TSL 1 (best) BASIC27.33■■□□□ 1.97
STAG3Q9UJ98 RPL19-204ENST00000579260 1051 ntAPPRIS ALT1 TSL 2 BASIC27.33■■□□□ 1.97
STAG3Q9UJ98 AC006538.3-201ENST00000612495 578 ntBASIC27.33■■□□□ 1.97
STAG3Q9UJ98 CADM1-222ENST00000616271 1246 ntTSL 5 BASIC27.33■■□□□ 1.97
STAG3Q9UJ98 SCAMP4-213ENST00000621748 1172 ntAPPRIS P1 TSL 5 BASIC27.33■■□□□ 1.97
STAG3Q9UJ98 AC112497.1-201ENST00000624824 639 ntBASIC27.33■■□□□ 1.97
STAG3Q9UJ98 CEACAM3-208ENST00000630848 1110 ntAPPRIS ALT2 TSL 5 BASIC27.33■■□□□ 1.97
STAG3Q9UJ98 AL391422.3-201ENST00000603791 2761 ntBASIC27.33■■□□□ 1.97
STAG3Q9UJ98 SLC25A42-201ENST00000318596 3120 ntAPPRIS P1 TSL 1 (best) BASIC27.33■■□□□ 1.97
STAG3Q9UJ98 ZNF815P-204ENST00000434898 1737 ntBASIC27.33■■□□□ 1.96
STAG3Q9UJ98 FMR1-204ENST00000370471 4125 ntTSL 5 BASIC27.32■■□□□ 1.96
STAG3Q9UJ98 MOB3C-202ENST00000319928 2822 ntAPPRIS P1 TSL 2 BASIC27.32■■□□□ 1.96
STAG3Q9UJ98 KIF12-202ENST00000468460 2162 ntAPPRIS ALT2 TSL 5 BASIC27.32■■□□□ 1.96
STAG3Q9UJ98 PANK1-201ENST00000307534 6976 ntTSL 1 (best) BASIC27.32■■□□□ 1.96
STAG3Q9UJ98 SRP9-203ENST00000366839 1596 ntTSL 1 (best) BASIC27.32■■□□□ 1.96
STAG3Q9UJ98 LINC01700-201ENST00000433952 1598 ntTSL 1 (best) BASIC27.32■■□□□ 1.96
STAG3Q9UJ98 TMEM42-201ENST00000302392 1026 ntAPPRIS P1 TSL 1 (best) BASIC27.32■■□□□ 1.96
STAG3Q9UJ98 MOS-201ENST00000311923 1041 ntAPPRIS P1 BASIC27.32■■□□□ 1.96
STAG3Q9UJ98 PHPT1-202ENST00000371661 985 ntTSL 5 BASIC27.32■■□□□ 1.96
STAG3Q9UJ98 ISG15-201ENST00000379389 711 ntAPPRIS P2 TSL 1 (best) BASIC27.32■■□□□ 1.96
STAG3Q9UJ98 GNB1L-203ENST00000405009 1076 ntTSL 1 (best) BASIC27.32■■□□□ 1.96
STAG3Q9UJ98 CIB2-208ENST00000560618 804 ntTSL 2 BASIC27.32■■□□□ 1.96
STAG3Q9UJ98 AC027796.4-201ENST00000575741 874 ntTSL 5 BASIC27.32■■□□□ 1.96
STAG3Q9UJ98 C1orf43-210ENST00000640799 1287 ntTSL 5 BASIC27.32■■□□□ 1.96
STAG3Q9UJ98 AL512408.1-201ENST00000569378 2000 ntBASIC27.32■■□□□ 1.96
STAG3Q9UJ98 CAMK2B-216ENST00000440254 2097 ntAPPRIS P4 TSL 1 (best) BASIC27.32■■□□□ 1.96
STAG3Q9UJ98 EMILIN2-201ENST00000254528 5910 ntAPPRIS P1 TSL 1 (best) BASIC27.32■■□□□ 1.96
STAG3Q9UJ98 ANAPC4-201ENST00000315368 2685 ntAPPRIS P3 TSL 1 (best) BASIC27.32■■□□□ 1.96
STAG3Q9UJ98 CYP2A7-202ENST00000301146 2281 ntAPPRIS P1 TSL 1 (best) BASIC27.32■■□□□ 1.96
STAG3Q9UJ98 HTRA3-202ENST00000382512 2023 ntTSL 1 (best) BASIC27.31■■□□□ 1.96
STAG3Q9UJ98 PAQR6-213ENST00000612424 2037 ntTSL 2 BASIC27.31■■□□□ 1.96
STAG3Q9UJ98 SLC46A3-202ENST00000380814 2121 ntAPPRIS ALT1 TSL 1 (best) BASIC27.31■■□□□ 1.96
STAG3Q9UJ98 ESYT2-201ENST00000251527 5960 ntAPPRIS P2 TSL 1 (best) BASIC27.31■■□□□ 1.96
STAG3Q9UJ98 FKBP3-201ENST00000216330 1684 ntAPPRIS P1 TSL 1 (best) BASIC27.31■■□□□ 1.96
STAG3Q9UJ98 CDC14B-208ENST00000463569 1734 ntAPPRIS ALT2 TSL 5 BASIC27.31■■□□□ 1.96
STAG3Q9UJ98 AC013402.1-201ENST00000456999 561 ntTSL 4 BASIC27.31■■□□□ 1.96
STAG3Q9UJ98 TOB2P1-201ENST00000469761 992 ntBASIC27.31■■□□□ 1.96
STAG3Q9UJ98 MIR3917-201ENST00000580971 93 ntBASIC27.31■■□□□ 1.96
STAG3Q9UJ98 GNAS-AS1-203ENST00000598163 548 ntTSL 4 BASIC27.31■■□□□ 1.96
STAG3Q9UJ98 AC004263.2-201ENST00000617183 678 ntBASIC27.31■■□□□ 1.96
STAG3Q9UJ98 ASAH1-251ENST00000637561 929 ntTSL 2 BASIC27.31■■□□□ 1.96
STAG3Q9UJ98 RNF32-208ENST00000432459 1893 ntAPPRIS P1 TSL 1 (best) BASIC27.31■■□□□ 1.96
STAG3Q9UJ98 SPSB3-201ENST00000301717 1449 ntAPPRIS P1 TSL 1 (best) BASIC27.31■■□□□ 1.96
STAG3Q9UJ98 LAT-204ENST00000395461 1448 ntAPPRIS ALT2 TSL 1 (best) BASIC27.31■■□□□ 1.96
STAG3Q9UJ98 TREX2-203ENST00000338525 2116 ntAPPRIS P1 TSL 1 (best) BASIC27.31■■□□□ 1.96
STAG3Q9UJ98 POLR2F-205ENST00000442738 2106 ntAPPRIS P1 TSL 1 (best) BASIC27.31■■□□□ 1.96
STAG3Q9UJ98 PCSK6-215ENST00000611967 3336 ntTSL 1 (best) BASIC27.3■■□□□ 1.96
STAG3Q9UJ98 MAFG-AS1-201ENST00000582106 1895 ntTSL 1 (best) BASIC27.3■■□□□ 1.96
STAG3Q9UJ98 FBXL17-205ENST00000542267 5188 ntAPPRIS P1 TSL 1 (best) BASIC27.3■■□□□ 1.96
STAG3Q9UJ98 KCNAB2-205ENST00000378092 1202 ntAPPRIS ALT1 TSL 5 BASIC27.3■■□□□ 1.96
STAG3Q9UJ98 RPP38-203ENST00000378202 1030 ntAPPRIS P1 TSL 1 (best) BASIC27.3■■□□□ 1.96
STAG3Q9UJ98 FAM239B-201ENST00000381106 1099 ntTSL 2 BASIC27.3■■□□□ 1.96
STAG3Q9UJ98 LINC01770-202ENST00000430109 510 ntTSL 3 BASIC27.3■■□□□ 1.96
STAG3Q9UJ98 KRT18P31-201ENST00000506277 1292 ntBASIC27.3■■□□□ 1.96
STAG3Q9UJ98 AC079776.4-201ENST00000511039 504 ntBASIC27.3■■□□□ 1.96
STAG3Q9UJ98 ANKRD13D-216ENST00000514166 2138 ntTSL 2 BASIC27.3■■□□□ 1.96
STAG3Q9UJ98 RPL26L1-205ENST00000519974 695 ntAPPRIS P1 TSL 3 BASIC27.3■■□□□ 1.96
STAG3Q9UJ98 AC012615.1-201ENST00000565797 1299 ntBASIC27.3■■□□□ 1.96
STAG3Q9UJ98 RNF126P1-202ENST00000569893 925 ntBASIC27.3■■□□□ 1.96
STAG3Q9UJ98 PPP1R1B-208ENST00000580825 1038 ntAPPRIS P1 TSL 5 BASIC27.3■■□□□ 1.96
STAG3Q9UJ98 SP3-208ENST00000640958 2142 ntAPPRIS ALT2 TSL 1 (best) BASIC27.3■■□□□ 1.96
STAG3Q9UJ98 LINC00960-201ENST00000463183 1333 ntTSL 1 (best) BASIC27.3■■□□□ 1.96
STAG3Q9UJ98 NEU4-205ENST00000407683 2273 ntAPPRIS P1 TSL 2 BASIC27.3■■□□□ 1.96
STAG3Q9UJ98 ZNF655-203ENST00000357864 1370 ntTSL 2 BASIC27.3■■□□□ 1.96
STAG3Q9UJ98 SEPT9-211ENST00000585930 1387 ntTSL 2 BASIC27.3■■□□□ 1.96
STAG3Q9UJ98 CDX4-201ENST00000373514 1515 ntAPPRIS P1 TSL 1 (best) BASIC27.3■■□□□ 1.96
STAG3Q9UJ98 DUSP15-201ENST00000278979 1732 ntTSL 2 BASIC27.3■■□□□ 1.96
STAG3Q9UJ98 RTN1-202ENST00000342503 1703 ntAPPRIS ALT1 TSL 1 (best) BASIC27.3■■□□□ 1.96
STAG3Q9UJ98 LPAR2-203ENST00000586703 1823 ntAPPRIS P1 TSL 1 (best) BASIC27.3■■□□□ 1.96
STAG3Q9UJ98 STXBP6-203ENST00000419632 1970 ntAPPRIS P1 TSL 1 (best) BASIC27.29■■□□□ 1.96
STAG3Q9UJ98 CHRNA3-202ENST00000348639 2030 ntTSL 1 (best) BASIC27.29■■□□□ 1.96
STAG3Q9UJ98 PCDHB12-202ENST00000622978 2093 ntTSL 2 BASIC27.29■■□□□ 1.96
STAG3Q9UJ98 MTMR12-203ENST00000382142 5187 ntAPPRIS P3 TSL 1 (best) BASIC27.29■■□□□ 1.96
STAG3Q9UJ98 AC073314.1-201ENST00000568729 2216 ntBASIC27.29■■□□□ 1.96
STAG3Q9UJ98 KCNH2-201ENST00000262186 4286 ntAPPRIS P1 TSL 1 (best) BASIC27.29■■□□□ 1.96
Retrieved 100 of 98,524 protein–RNA pairs in 21.9 ms