Protein–RNA interactions for Protein: Q9NSC5

HOMER3, Homer protein homolog 3, humanhuman

Predictions only

Length 361 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOMER3Q9NSC5 TMEM175-220ENST00000515740 1514 ntTSL 3 BASIC19.83■□□□□ 0.77
HOMER3Q9NSC5 PODXL2-201ENST00000342480 2186 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
HOMER3Q9NSC5 MAPKAPK3-208ENST00000621469 2563 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
HOMER3Q9NSC5 PSPN-201ENST00000245810 471 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
HOMER3Q9NSC5 CD8B-205ENST00000393761 932 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
HOMER3Q9NSC5 CD8B-206ENST00000431506 692 ntAPPRIS ALT2 TSL 5 BASIC19.83■□□□□ 0.77
HOMER3Q9NSC5 TSPY6P-201ENST00000448518 926 ntBASIC19.83■□□□□ 0.77
HOMER3Q9NSC5 SLC29A4P2-201ENST00000504749 1089 ntBASIC19.83■□□□□ 0.77
HOMER3Q9NSC5 COPS7A-215ENST00000543155 2127 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
HOMER3Q9NSC5 LITAF-205ENST00000570904 1118 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
HOMER3Q9NSC5 ATXN7L2-202ENST00000369870 2318 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
HOMER3Q9NSC5 PMEPA1-202ENST00000341744 4845 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
HOMER3Q9NSC5 SLC37A2-203ENST00000403796 2910 ntAPPRIS ALT1 TSL 2 BASIC19.83■□□□□ 0.76
HOMER3Q9NSC5 NUP50-AS1-201ENST00000426282 2076 ntTSL 1 (best) BASIC19.83■□□□□ 0.76
HOMER3Q9NSC5 MEPCE-202ENST00000414441 2261 ntTSL 2 BASIC19.83■□□□□ 0.76
HOMER3Q9NSC5 KCNH1-210ENST00000640044 1818 ntTSL 1 (best) BASIC19.83■□□□□ 0.76
HOMER3Q9NSC5 USP49-202ENST00000373010 2446 ntTSL 5 BASIC19.83■□□□□ 0.76
HOMER3Q9NSC5 RAPGEF5-203ENST00000405243 2800 ntTSL 1 (best) BASIC19.83■□□□□ 0.76
HOMER3Q9NSC5 BAG3-201ENST00000369085 2571 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
HOMER3Q9NSC5 CLEC10A-201ENST00000254868 1797 ntAPPRIS P3 TSL 1 (best) BASIC19.83■□□□□ 0.76
HOMER3Q9NSC5 PSRC1-202ENST00000369904 1584 ntAPPRIS ALT2 TSL 1 (best) BASIC19.83■□□□□ 0.76
HOMER3Q9NSC5 VEGFB-201ENST00000309422 1380 ntAPPRIS P3 TSL 1 (best) BASIC19.83■□□□□ 0.76
HOMER3Q9NSC5 PITX3-201ENST00000370002 1391 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
HOMER3Q9NSC5 LINC00461-203ENST00000504246 2300 ntTSL 2 BASIC19.82■□□□□ 0.76
HOMER3Q9NSC5 P4HB-203ENST00000439918 1502 ntTSL 5 BASIC19.82■□□□□ 0.76
HOMER3Q9NSC5 GAS2L1P2-202ENST00000442849 2262 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
HOMER3Q9NSC5 CACTIN-201ENST00000221899 2797 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
HOMER3Q9NSC5 RAB4A-205ENST00000618010 2799 ntTSL 3 BASIC19.82■□□□□ 0.76
HOMER3Q9NSC5 SPTBN4-204ENST00000392025 8671 ntAPPRIS ALT1 TSL 5 BASIC19.82■□□□□ 0.76
HOMER3Q9NSC5 SBK2-201ENST00000344158 1056 ntAPPRIS P1 TSL 2 BASIC19.82■□□□□ 0.76
HOMER3Q9NSC5 SBK2-202ENST00000413299 1085 ntAPPRIS P1 TSL 5 BASIC19.82■□□□□ 0.76
HOMER3Q9NSC5 NCF1B-203ENST00000435988 1254 ntBASIC19.82■□□□□ 0.76
HOMER3Q9NSC5 LEF1-AS1-203ENST00000507799 459 ntTSL 3 BASIC19.82■□□□□ 0.76
HOMER3Q9NSC5 ABCC3-217ENST00000515707 656 ntTSL 3 BASIC19.82■□□□□ 0.76
HOMER3Q9NSC5 ZFPL1-203ENST00000525509 478 ntTSL 2 BASIC19.82■□□□□ 0.76
HOMER3Q9NSC5 AC069185.1-201ENST00000531395 811 ntTSL 3 BASIC19.82■□□□□ 0.76
HOMER3Q9NSC5 RHOD-202ENST00000532559 538 ntTSL 3 BASIC19.82■□□□□ 0.76
HOMER3Q9NSC5 KCTD10-211ENST00000540411 866 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
HOMER3Q9NSC5 PFKL-212ENST00000628044 129 ntTSL 3 BASIC19.82■□□□□ 0.76
HOMER3Q9NSC5 ADORA2A-213ENST00000610595 2736 ntAPPRIS P1 TSL 2 BASIC19.82■□□□□ 0.76
HOMER3Q9NSC5 RREB1-201ENST00000334984 5789 ntAPPRIS ALT2 TSL 1 (best) BASIC19.82■□□□□ 0.76
HOMER3Q9NSC5 SREBF2-201ENST00000361204 5240 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
HOMER3Q9NSC5 MAN2A1-201ENST00000261483 4667 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
HOMER3Q9NSC5 CDK11B-208ENST00000629289 2490 ntTSL 5 BASIC19.82■□□□□ 0.76
HOMER3Q9NSC5 CDK11B-209ENST00000629312 2496 ntTSL 5 BASIC19.82■□□□□ 0.76
HOMER3Q9NSC5 VMAC-201ENST00000339485 2254 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
HOMER3Q9NSC5 COL18A1-204ENST00000400337 5436 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
HOMER3Q9NSC5 COL16A1-203ENST00000373672 5736 ntAPPRIS P1 TSL 5 BASIC19.82■□□□□ 0.76
HOMER3Q9NSC5 AC009113.1-201ENST00000570267 2443 ntBASIC19.82■□□□□ 0.76
HOMER3Q9NSC5 SLC5A10-203ENST00000395645 2069 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
HOMER3Q9NSC5 CASC2-205ENST00000454781 2216 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
HOMER3Q9NSC5 SLC38A10-201ENST00000288439 2708 ntAPPRIS P3 TSL 1 (best) BASIC19.82■□□□□ 0.76
HOMER3Q9NSC5 CD151-201ENST00000322008 1548 ntAPPRIS P2 TSL 1 (best) BASIC19.81■□□□□ 0.76
HOMER3Q9NSC5 AAED1-201ENST00000375234 2863 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
HOMER3Q9NSC5 TFEB-203ENST00000358871 2188 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
HOMER3Q9NSC5 CDK5R1-201ENST00000313401 4325 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
HOMER3Q9NSC5 PNPO-201ENST00000225573 2256 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
HOMER3Q9NSC5 SIGLEC10-204ENST00000436984 1776 ntTSL 2 BASIC19.81■□□□□ 0.76
HOMER3Q9NSC5 IMPAD1-201ENST00000262644 7199 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
HOMER3Q9NSC5 TMPO-201ENST00000261210 820 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
HOMER3Q9NSC5 TSPY21P-201ENST00000433481 731 ntBASIC19.81■□□□□ 0.76
HOMER3Q9NSC5 GUSBP6-202ENST00000438529 1198 ntBASIC19.81■□□□□ 0.76
HOMER3Q9NSC5 TMEM41B-205ENST00000533723 723 ntTSL 2 BASIC19.81■□□□□ 0.76
HOMER3Q9NSC5 PLEKHB1-216ENST00000543085 632 ntTSL 3 BASIC19.81■□□□□ 0.76
HOMER3Q9NSC5 AC083906.6-201ENST00000641366 219 ntBASIC19.81■□□□□ 0.76
HOMER3Q9NSC5 BAIAP2-203ENST00000416299 1442 ntTSL 2 BASIC19.81■□□□□ 0.76
HOMER3Q9NSC5 FBXL7-202ENST00000504595 4562 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
HOMER3Q9NSC5 NOL3-204ENST00000564053 1592 ntAPPRIS ALT2 TSL 2 BASIC19.81■□□□□ 0.76
HOMER3Q9NSC5 SNX11-201ENST00000359238 2315 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
HOMER3Q9NSC5 ANKS3-202ENST00000446014 2265 ntTSL 5 BASIC19.81■□□□□ 0.76
HOMER3Q9NSC5 GLIS1-201ENST00000312233 2812 ntAPPRIS P2 TSL 2 BASIC19.8■□□□□ 0.76
HOMER3Q9NSC5 GLIS1-202ENST00000628545 2807 ntAPPRIS ALT2 TSL 5 BASIC19.8■□□□□ 0.76
HOMER3Q9NSC5 SNRPN-207ENST00000554227 1763 ntTSL 5 BASIC19.8■□□□□ 0.76
HOMER3Q9NSC5 TEKT5-201ENST00000283025 1612 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
HOMER3Q9NSC5 SIM2-201ENST00000290399 4442 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
HOMER3Q9NSC5 SLCO4A1-201ENST00000217159 2776 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
HOMER3Q9NSC5 PPM1G-201ENST00000344034 2311 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
HOMER3Q9NSC5 PDZD7-201ENST00000370215 2032 ntTSL 2 BASIC19.8■□□□□ 0.76
HOMER3Q9NSC5 YY1AP1-213ENST00000405763 2011 ntAPPRIS ALT2 TSL 1 (best) BASIC19.8■□□□□ 0.76
HOMER3Q9NSC5 KXD1-203ENST00000540691 1592 ntAPPRIS P1 TSL 3 BASIC19.8■□□□□ 0.76
HOMER3Q9NSC5 MRPS24-201ENST00000317534 707 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
HOMER3Q9NSC5 VMO1-201ENST00000328739 766 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
HOMER3Q9NSC5 AL021707.1-201ENST00000416406 500 ntTSL 3 BASIC19.8■□□□□ 0.76
HOMER3Q9NSC5 AC026427.1-201ENST00000508993 555 ntTSL 3 BASIC19.8■□□□□ 0.76
HOMER3Q9NSC5 PPP1R14BP3-201ENST00000509033 445 ntBASIC19.8■□□□□ 0.76
HOMER3Q9NSC5 FAM219B-212ENST00000565772 1249 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
HOMER3Q9NSC5 MAGIX-202ENST00000595224 1238 ntAPPRIS P2 TSL 5 BASIC19.8■□□□□ 0.76
HOMER3Q9NSC5 MMP25-204ENST00000612971 1017 ntTSL 5 BASIC19.8■□□□□ 0.76
HOMER3Q9NSC5 P2RX5-203ENST00000547178 1998 ntAPPRIS ALT2 TSL 1 (best) BASIC19.8■□□□□ 0.76
HOMER3Q9NSC5 NUTM2F-202ENST00000341207 2516 ntAPPRIS ALT2 TSL 5 BASIC19.8■□□□□ 0.76
HOMER3Q9NSC5 NUTM2G-202ENST00000372322 2516 ntAPPRIS ALT2 TSL 5 BASIC19.8■□□□□ 0.76
HOMER3Q9NSC5 MCU-202ENST00000373053 2949 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
HOMER3Q9NSC5 KRT86-202ENST00000423955 2217 ntAPPRIS P1 TSL 2 BASIC19.8■□□□□ 0.76
HOMER3Q9NSC5 RUNX2-202ENST00000371432 5487 ntAPPRIS ALT2 TSL 5 BASIC19.8■□□□□ 0.76
HOMER3Q9NSC5 LGALS9C-212ENST00000583322 1602 ntAPPRIS ALT1 TSL 5 BASIC19.8■□□□□ 0.76
HOMER3Q9NSC5 UBE2I-203ENST00000397514 2976 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
HOMER3Q9NSC5 PRODH-215ENST00000610940 2405 ntAPPRIS P3 TSL 1 (best) BASIC19.8■□□□□ 0.76
HOMER3Q9NSC5 SLC35F5-201ENST00000245680 4412 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
HOMER3Q9NSC5 KLHL40-201ENST00000287777 2517 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
HOMER3Q9NSC5 FGF17-201ENST00000359441 1714 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Retrieved 100 of 98,524 protein–RNA pairs in 29.7 ms