Protein–RNA interactions for Protein: Q9H1C7

CYSTM1, Cysteine-rich and transmembrane domain-containing protein 1, humanhuman

Predictions only

Length 97 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CYSTM1Q9H1C7 ZNF165-201ENST00000377325 2107 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
CYSTM1Q9H1C7 SNX18-202ENST00000343017 3140 ntBASIC11.08□□□□□ -0.64
CYSTM1Q9H1C7 POLR3D-201ENST00000306433 1931 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
CYSTM1Q9H1C7 SSR1-204ENST00000474597 1808 ntTSL 5 BASIC11.08□□□□□ -0.64
CYSTM1Q9H1C7 AC004837.3-201ENST00000420748 565 ntTSL 4 BASIC11.08□□□□□ -0.64
CYSTM1Q9H1C7 AC009086.3-201ENST00000623486 1008 ntBASIC11.08□□□□□ -0.64
CYSTM1Q9H1C7 TEN1-CDK3-202ENST00000569284 3287 ntAPPRIS P1 TSL 2 BASIC11.08□□□□□ -0.64
CYSTM1Q9H1C7 WDR1-202ENST00000382451 2722 ntTSL 1 (best) BASIC11.08□□□□□ -0.64
CYSTM1Q9H1C7 EWSAT1-206ENST00000558922 1725 ntTSL 5 BASIC11.08□□□□□ -0.64
CYSTM1Q9H1C7 MADCAM1-204ENST00000587541 1723 ntTSL 2 BASIC11.08□□□□□ -0.64
CYSTM1Q9H1C7 CRTC3-201ENST00000268184 2537 ntAPPRIS P3 TSL 1 (best) BASIC11.08□□□□□ -0.64
CYSTM1Q9H1C7 PATZ1-202ENST00000266269 3781 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
CYSTM1Q9H1C7 TSPAN14-210ENST00000616406 2436 ntTSL 2 BASIC11.08□□□□□ -0.64
CYSTM1Q9H1C7 AC005329.1-201ENST00000501448 3571 ntTSL 2 BASIC11.08□□□□□ -0.64
CYSTM1Q9H1C7 SESN3-202ENST00000416495 1408 ntTSL 1 (best) BASIC11.08□□□□□ -0.64
CYSTM1Q9H1C7 FAM228A-201ENST00000295150 1774 ntAPPRIS P2 TSL 1 (best) BASIC11.08□□□□□ -0.64
CYSTM1Q9H1C7 LYNX1-206ENST00000621401 4537 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
CYSTM1Q9H1C7 TLE3-215ENST00000559048 2918 ntTSL 2 BASIC11.08□□□□□ -0.64
CYSTM1Q9H1C7 TTLL10-201ENST00000379288 2114 ntTSL 1 (best) BASIC11.08□□□□□ -0.64
CYSTM1Q9H1C7 KPNA2-202ENST00000537025 2456 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
CYSTM1Q9H1C7 GNB1L-202ENST00000403325 1699 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
CYSTM1Q9H1C7 SLC39A6-202ENST00000440549 1657 ntAPPRIS ALT2 TSL 1 (best) BASIC11.08□□□□□ -0.64
CYSTM1Q9H1C7 CAMKV-205ENST00000467248 1688 ntTSL 2 BASIC11.08□□□□□ -0.64
CYSTM1Q9H1C7 COPS3-212ENST00000539941 1699 ntTSL 2 BASIC11.08□□□□□ -0.64
CYSTM1Q9H1C7 SLC22A23-210ENST00000490273 2043 ntTSL 1 (best) BASIC11.08□□□□□ -0.64
CYSTM1Q9H1C7 GPBAR1-204ENST00000522678 2003 ntAPPRIS P1 TSL 2 BASIC11.08□□□□□ -0.64
CYSTM1Q9H1C7 OTOP3-201ENST00000328801 2363 ntAPPRIS P1 TSL 2 BASIC11.08□□□□□ -0.64
CYSTM1Q9H1C7 TNRC18P2-201ENST00000417666 2714 ntBASIC11.08□□□□□ -0.64
CYSTM1Q9H1C7 MAPK7-203ENST00000395602 3059 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
CYSTM1Q9H1C7 PMS1-221ENST00000624204 3417 ntTSL 2 BASIC11.07□□□□□ -0.64
CYSTM1Q9H1C7 SOGA3-201ENST00000465909 3756 ntTSL 5 BASIC11.07□□□□□ -0.64
CYSTM1Q9H1C7 ALDH3A1-206ENST00000457500 1925 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
CYSTM1Q9H1C7 SHMT2-232ENST00000557487 1918 ntTSL 1 (best) BASIC11.07□□□□□ -0.64
CYSTM1Q9H1C7 IRS2-201ENST00000375856 8138 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
CYSTM1Q9H1C7 GRB2-202ENST00000316804 3248 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
CYSTM1Q9H1C7 INA-201ENST00000369849 3231 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
CYSTM1Q9H1C7 CALU-205ENST00000535011 3210 ntTSL 1 (best) BASIC11.07□□□□□ -0.64
CYSTM1Q9H1C7 RBM26-207ENST00000622611 5230 ntTSL 2 BASIC11.07□□□□□ -0.64
CYSTM1Q9H1C7 AC142086.1-202ENST00000398669 1839 ntTSL 2 BASIC11.07□□□□□ -0.64
CYSTM1Q9H1C7 ABHD16B-201ENST00000369916 1491 ntAPPRIS P1 BASIC11.07□□□□□ -0.64
CYSTM1Q9H1C7 WT1-209ENST00000530998 2421 ntTSL 2 BASIC11.07□□□□□ -0.64
CYSTM1Q9H1C7 SRPK1-204ENST00000373825 4592 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
CYSTM1Q9H1C7 CELF6-202ENST00000395258 1741 ntTSL 5 BASIC11.07□□□□□ -0.64
CYSTM1Q9H1C7 EDN3-205ENST00000395654 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC11.07□□□□□ -0.64
CYSTM1Q9H1C7 AC005865.2-201ENST00000505276 2303 ntTSL 2 BASIC11.07□□□□□ -0.64
CYSTM1Q9H1C7 GDF5-202ENST00000374372 2572 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
CYSTM1Q9H1C7 VGF-203ENST00000611537 1622 ntTSL 5 BASIC11.07□□□□□ -0.64
CYSTM1Q9H1C7 AVPR1A-201ENST00000299178 5963 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
CYSTM1Q9H1C7 ABLIM2-202ENST00000361581 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC11.07□□□□□ -0.64
CYSTM1Q9H1C7 SULT1A1-204ENST00000395609 1871 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
CYSTM1Q9H1C7 AQP1-203ENST00000409899 1009 ntTSL 1 (best) BASIC11.07□□□□□ -0.64
CYSTM1Q9H1C7 AC012629.2-201ENST00000606513 377 ntTSL 5 BASIC11.07□□□□□ -0.64
CYSTM1Q9H1C7 TLL1-204ENST00000507499 4818 ntTSL 1 (best) BASIC11.07□□□□□ -0.64
CYSTM1Q9H1C7 SRSF2-203ENST00000392485 2885 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
CYSTM1Q9H1C7 ATG4B-205ENST00000404914 2878 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
CYSTM1Q9H1C7 DPYSL3-202ENST00000398514 5309 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
CYSTM1Q9H1C7 FAM227B-201ENST00000299338 2008 ntAPPRIS P3 TSL 2 BASIC11.07□□□□□ -0.64
CYSTM1Q9H1C7 CMTM6-201ENST00000205636 3863 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
CYSTM1Q9H1C7 KCTD12-201ENST00000377474 6225 ntAPPRIS P1 BASIC11.07□□□□□ -0.64
CYSTM1Q9H1C7 ARHGAP22-201ENST00000249601 2751 ntAPPRIS P3 TSL 1 (best) BASIC11.07□□□□□ -0.64
CYSTM1Q9H1C7 B4GALNT1-201ENST00000341156 3036 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
CYSTM1Q9H1C7 TAF5-201ENST00000369839 3268 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
CYSTM1Q9H1C7 MCF2L-232ENST00000535094 3752 ntAPPRIS ALT2 TSL 2 BASIC11.07□□□□□ -0.64
CYSTM1Q9H1C7 CFP-202ENST00000377005 1435 ntAPPRIS ALT2 TSL 1 (best) BASIC11.07□□□□□ -0.64
CYSTM1Q9H1C7 PLD3-201ENST00000356508 1906 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
CYSTM1Q9H1C7 USP39-202ENST00000409025 1946 ntTSL 5 BASIC11.07□□□□□ -0.64
CYSTM1Q9H1C7 AL928970.1-201ENST00000422679 2923 ntTSL 5 BASIC11.07□□□□□ -0.64
CYSTM1Q9H1C7 SHROOM1-201ENST00000319854 3190 ntAPPRIS P3 TSL 1 (best) BASIC11.07□□□□□ -0.64
CYSTM1Q9H1C7 SLC40A1-201ENST00000261024 3442 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
CYSTM1Q9H1C7 SH2B3-202ENST00000538307 2062 ntTSL 2 BASIC11.07□□□□□ -0.64
CYSTM1Q9H1C7 CACNB3-203ENST00000540990 1814 ntTSL 2 BASIC11.07□□□□□ -0.64
CYSTM1Q9H1C7 BARX1-202ENST00000401724 1323 ntTSL 1 (best) BASIC11.07□□□□□ -0.64
CYSTM1Q9H1C7 GUCD1-204ENST00000407471 3482 ntAPPRIS P3 TSL 5 BASIC11.07□□□□□ -0.64
CYSTM1Q9H1C7 C21orf58-201ENST00000291691 2975 ntAPPRIS P3 TSL 2 BASIC11.07□□□□□ -0.64
CYSTM1Q9H1C7 ASPH-211ENST00000518068 2744 ntTSL 1 (best) BASIC11.07□□□□□ -0.64
CYSTM1Q9H1C7 ZCCHC3-201ENST00000500893 3354 ntAPPRIS P1 BASIC11.07□□□□□ -0.64
CYSTM1Q9H1C7 TNFRSF14-201ENST00000355716 1707 ntAPPRIS P2 TSL 1 (best) BASIC11.06□□□□□ -0.64
CYSTM1Q9H1C7 GABRD-205ENST00000638771 1707 ntAPPRIS ALT2 TSL 3 BASIC11.06□□□□□ -0.64
CYSTM1Q9H1C7 SLC18B1-201ENST00000275227 2368 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
CYSTM1Q9H1C7 CLIC5-202ENST00000339561 2390 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
CYSTM1Q9H1C7 YTHDF3-215ENST00000621957 2387 ntAPPRIS ALT1 TSL 5 BASIC11.06□□□□□ -0.64
CYSTM1Q9H1C7 CACNA2D3-201ENST00000288197 3671 ntAPPRIS ALT2 TSL 1 (best) BASIC11.06□□□□□ -0.64
CYSTM1Q9H1C7 CACNA2D3-206ENST00000474759 3675 ntAPPRIS P2 TSL 1 (best) BASIC11.06□□□□□ -0.64
CYSTM1Q9H1C7 DMTN-202ENST00000358242 2772 ntTSL 5 BASIC11.06□□□□□ -0.64
CYSTM1Q9H1C7 FAM104A-201ENST00000403627 2798 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
CYSTM1Q9H1C7 NFATC1-218ENST00000592223 2531 ntAPPRIS ALT2 TSL 1 (best) BASIC11.06□□□□□ -0.64
CYSTM1Q9H1C7 SYNPO-201ENST00000307662 5374 ntAPPRIS P3 TSL 1 (best) BASIC11.06□□□□□ -0.64
CYSTM1Q9H1C7 HAUS4-201ENST00000206474 1642 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
CYSTM1Q9H1C7 RNASEH2B-201ENST00000336617 1629 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
CYSTM1Q9H1C7 SNX11-203ENST00000452859 1601 ntTSL 2 BASIC11.06□□□□□ -0.64
CYSTM1Q9H1C7 MAGI1-216ENST00000497477 3555 ntTSL 5 BASIC11.06□□□□□ -0.64
CYSTM1Q9H1C7 GNAZ-203ENST00000615612 3333 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
CYSTM1Q9H1C7 ADAM15-228ENST00000531455 2678 ntAPPRIS ALT2 TSL 2 BASIC11.06□□□□□ -0.64
CYSTM1Q9H1C7 AICDA-201ENST00000229335 2819 ntAPPRIS P2 TSL 1 (best) BASIC11.06□□□□□ -0.64
CYSTM1Q9H1C7 FOXI2-201ENST00000388920 3217 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
CYSTM1Q9H1C7 PNKD-202ENST00000258362 2991 ntAPPRIS ALT2 TSL 1 (best) BASIC11.06□□□□□ -0.64
CYSTM1Q9H1C7 NAT14-201ENST00000205194 1536 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
CYSTM1Q9H1C7 YAP1-209ENST00000537274 5350 ntAPPRIS ALT2 TSL 5 BASIC11.06□□□□□ -0.64
CYSTM1Q9H1C7 ATP6V0A4-201ENST00000310018 3135 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
CYSTM1Q9H1C7 NLRX1-202ENST00000409109 4092 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Retrieved 100 of 98,524 protein–RNA pairs in 22.6 ms