Protein–RNA interactions for Protein: Q9H0D6

XRN2, 5'-3' exoribonuclease 2, humanhuman

Known RBP eCLIP

Length 950 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
XRN2Q9H0D6 DNM1-222ENST00000636280 2462 ntTSL 516.79■□□□□ 0.282e-12■■■■□ 19.3
XRN2Q9H0D6 OGFR-AS1-201ENST00000431361 668 ntTSL 2 BASIC16.41■□□□□ 0.226e-7■■■■□ 19.3
XRN2Q9H0D6 CAPN15-201ENST00000219611 4744 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.522e-6■■■■□ 19.3
XRN2Q9H0D6 SCART1-205ENST00000488261 4709 ntTSL 220.07■□□□□ 0.88e-7■■■■□ 19.3
XRN2Q9H0D6 SCART1-202ENST00000463137 4756 ntTSL 219.64■□□□□ 0.748e-7■■■■□ 19.3
XRN2Q9H0D6 SCART1-204ENST00000482993 4904 ntTSL 219.38■□□□□ 0.698e-7■■■■□ 19.3
XRN2Q9H0D6 SCART1-206ENST00000640237 4351 ntAPPRIS P1 TSL 5 BASIC16.14■□□□□ 0.178e-7■■■■□ 19.3
XRN2Q9H0D6 PTP4A1-201ENST00000370651 5088 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.313e-10■■■□□ 19.2
XRN2Q9H0D6 PTP4A1-202ENST00000470661 479 ntTSL 27.87□□□□□ -1.153e-10■■■□□ 19.2
XRN2Q9H0D6 PTP4A1-204ENST00000578299 135 ntTSL 2 BASIC2.43□□□□□ -2.023e-10■■■□□ 19.2
XRN2Q9H0D6 RAB43-207ENST00000476465 1627 ntTSL 3 BASIC32.18■■■□□ 2.741e-8■■■□□ 19.2
XRN2Q9H0D6 PRMT5-228ENST00000627278 129 ntTSL 5 BASIC27.9■■■□□ 2.061e-8■■■□□ 19.2
XRN2Q9H0D6 PRMT5-225ENST00000557415 584 ntTSL 227.64■■■□□ 2.021e-8■■■□□ 19.2
XRN2Q9H0D6 SSBP4-205ENST00000598159 747 ntTSL 327.51■■□□□ 1.995e-6■■■□□ 19.2
XRN2Q9H0D6 PRMT5-205ENST00000421938 565 ntTSL 327.25■■□□□ 1.951e-8■■■□□ 19.2
XRN2Q9H0D6 SSBP4-209ENST00000601357 606 ntTSL 527.14■■□□□ 1.945e-6■■■□□ 19.2
XRN2Q9H0D6 PRMT5-210ENST00000553550 580 ntTSL 326■■□□□ 1.751e-8■■■□□ 19.2
XRN2Q9H0D6 KANSL1-214ENST00000576739 592 ntTSL 225.93■■□□□ 1.741e-8■■■□□ 19.2
XRN2Q9H0D6 MRPL14-201ENST00000372014 959 ntAPPRIS P1 TSL 1 (best) BASIC25.86■■□□□ 1.731e-8■■■□□ 19.2
XRN2Q9H0D6 RAB43-208ENST00000615093 783 ntTSL 5 BASIC25.86■■□□□ 1.731e-8■■■□□ 19.2
XRN2Q9H0D6 PRMT5-215ENST00000554716 561 ntTSL 425.59■■□□□ 1.691e-8■■■□□ 19.2
XRN2Q9H0D6 NUMB-219ENST00000555987 557 ntTSL 425.34■■□□□ 1.653e-7■■■□□ 19.2
XRN2Q9H0D6 NUMB-221ENST00000556600 751 ntTSL 325.34■■□□□ 1.653e-7■■■□□ 19.2
XRN2Q9H0D6 PRMT5-222ENST00000556426 563 ntTSL 324.2■■□□□ 1.461e-8■■■□□ 19.2
XRN2Q9H0D6 PRMT5-213ENST00000553897 1857 ntTSL 2 BASIC24.07■■□□□ 1.441e-8■■■□□ 19.2
XRN2Q9H0D6 GLYCTK-205ENST00000473032 935 ntTSL 1 (best) BASIC23.75■■□□□ 1.391e-8■■■□□ 19.2
XRN2Q9H0D6 PRMT5-224ENST00000557015 628 ntTSL 222.99■■□□□ 1.271e-8■■■□□ 19.2
XRN2Q9H0D6 SEPHS1-203ENST00000413411 660 ntTSL 222.93■■□□□ 1.261e-8■■■□□ 19.2
XRN2Q9H0D6 PRMT5-212ENST00000553787 579 ntTSL 422.09■■□□□ 1.131e-8■■■□□ 19.2
XRN2Q9H0D6 PRMT5-216ENST00000554867 555 ntTSL 221.94■■□□□ 1.11e-8■■■□□ 19.2
XRN2Q9H0D6 RAB43-206ENST00000457077 574 ntTSL 421.83■■□□□ 1.091e-8■■■□□ 19.2
XRN2Q9H0D6 GLYCTK-201ENST00000305690 1371 ntTSL 5 BASIC21.44■■□□□ 1.021e-8■■■□□ 19.2
XRN2Q9H0D6 PRMT5-201ENST00000216350 2271 ntTSL 2 BASIC20.26■□□□□ 0.831e-8■■■□□ 19.2
XRN2Q9H0D6 SSBP4-211ENST00000601614 628 ntTSL 220.1■□□□□ 0.815e-6■■■□□ 19.2
XRN2Q9H0D6 GLYCTK-206ENST00000473583 1021 ntTSL 1 (best)20.08■□□□□ 0.811e-8■■■□□ 19.2
XRN2Q9H0D6 GLYCTK-202ENST00000436784 1982 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.81e-8■■■□□ 19.2
XRN2Q9H0D6 SSBP4-204ENST00000597724 865 ntTSL 519.6■□□□□ 0.735e-6■■■□□ 19.2
XRN2Q9H0D6 KANSL1-202ENST00000432791 5343 ntAPPRIS P3 TSL 1 (best) BASIC19.24■□□□□ 0.671e-8■■■□□ 19.2
XRN2Q9H0D6 KANSL1-218ENST00000638275 5352 ntTSL 5 BASIC19.24■□□□□ 0.671e-8■■■□□ 19.2
XRN2Q9H0D6 GLYCTK-207ENST00000477382 1304 ntTSL 1 (best) BASIC19.09■□□□□ 0.651e-8■■■□□ 19.2
XRN2Q9H0D6 GLYCTK-208ENST00000486393 2019 ntTSL 1 (best)19■□□□□ 0.631e-8■■■□□ 19.2
XRN2Q9H0D6 SSBP4-214ENST00000607020 504 ntTSL 318.69■□□□□ 0.585e-6■■■□□ 19.2
XRN2Q9H0D6 RAB43-201ENST00000315150 4467 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.511e-8■■■□□ 19.2
XRN2Q9H0D6 KANSL1-225ENST00000639356 1717 ntTSL 518.09■□□□□ 0.491e-8■■■□□ 19.2
XRN2Q9H0D6 GLYCTK-203ENST00000461183 889 ntTSL 3 BASIC17.99■□□□□ 0.471e-8■■■□□ 19.2
XRN2Q9H0D6 PRMT5-204ENST00000397441 2418 ntTSL 2 BASIC17.87■□□□□ 0.451e-8■■■□□ 19.2
XRN2Q9H0D6 MED24-225ENST00000580885 1963 ntTSL 517.72■□□□□ 0.431e-8■■■□□ 19.2
XRN2Q9H0D6 KANSL1-222ENST00000639099 1724 ntTSL 517.61■□□□□ 0.411e-8■■■□□ 19.2
XRN2Q9H0D6 KANSL1-209ENST00000574655 1681 ntTSL 517.58■□□□□ 0.411e-8■■■□□ 19.2
XRN2Q9H0D6 OSBPL3-210ENST00000415952 568 ntTSL 417.32■□□□□ 0.361e-8■■■□□ 19.2
XRN2Q9H0D6 NUMB-213ENST00000554818 552 ntTSL 317.15■□□□□ 0.343e-7■■■□□ 19.2
XRN2Q9H0D6 PES1-202ENST00000354694 2295 ntAPPRIS P3 TSL 1 (best) BASIC17.14■□□□□ 0.331e-8■■■□□ 19.2
XRN2Q9H0D6 PDAP1-204ENST00000496335 302 ntTSL 317.14■□□□□ 0.331e-8■■■□□ 19.2
XRN2Q9H0D6 GLYCTK-204ENST00000471180 992 ntTSL 2 BASIC16.89■□□□□ 0.291e-8■■■□□ 19.2
XRN2Q9H0D6 PRMT5-203ENST00000397440 1907 ntTSL 1 (best) BASIC16.82■□□□□ 0.281e-8■■■□□ 19.2
XRN2Q9H0D6 GLYCTK-209ENST00000489173 2083 ntTSL 516.81■□□□□ 0.281e-8■■■□□ 19.2
XRN2Q9H0D6 KANSL1-223ENST00000639150 1815 ntTSL 516.75■□□□□ 0.271e-8■■■□□ 19.2
XRN2Q9H0D6 PES1-204ENST00000402284 2144 ntTSL 5 BASIC16.68■□□□□ 0.261e-8■■■□□ 19.2
XRN2Q9H0D6 NUMB-215ENST00000555307 1039 ntTSL 516.17■□□□□ 0.183e-7■■■□□ 19.2
XRN2Q9H0D6 NUMB-209ENST00000554315 1740 ntTSL 1 (best)16.03■□□□□ 0.163e-7■■■□□ 19.2
XRN2Q9H0D6 SLC2A9-209ENST00000506839 446 ntTSL 315.62■□□□□ 0.092e-6■■■□□ 19.2
XRN2Q9H0D6 NUMB-230ENST00000557774 847 ntTSL 215.57■□□□□ 0.083e-7■■■□□ 19.2
XRN2Q9H0D6 PES1-201ENST00000335214 1988 ntAPPRIS ALT1 TSL 1 (best) BASIC15.36■□□□□ 0.051e-8■■■□□ 19.2
XRN2Q9H0D6 PES1-206ENST00000406208 871 ntTSL 515.35■□□□□ 0.051e-8■■■□□ 19.2
XRN2Q9H0D6 PRMT5-214ENST00000553915 1931 ntTSL 215.23■□□□□ 0.031e-8■■■□□ 19.2
XRN2Q9H0D6 HERC2-207ENST00000564734 3121 ntTSL 1 (best)15.19■□□□□ 0.021e-8■■■□□ 19.2
XRN2Q9H0D6 KANSL1-203ENST00000571698 2276 ntTSL 515.18■□□□□ 0.021e-8■■■□□ 19.2
XRN2Q9H0D6 PRMT5-202ENST00000324366 2531 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.021e-8■■■□□ 19.2
XRN2Q9H0D6 KANSL1-221ENST00000638902 1971 ntTSL 214.84□□□□□ -0.031e-8■■■□□ 19.2
XRN2Q9H0D6 NUMB-216ENST00000555394 3037 ntAPPRIS ALT1 TSL 1 (best) BASIC14.8□□□□□ -0.043e-7■■■□□ 19.2
XRN2Q9H0D6 MED24-213ENST00000535071 2441 ntTSL 514.76□□□□□ -0.051e-8■■■□□ 19.2
XRN2Q9H0D6 PES1-211ENST00000477762 513 ntTSL 514.54□□□□□ -0.081e-8■■■□□ 19.2
XRN2Q9H0D6 RAB43-202ENST00000393304 4230 ntAPPRIS P1 TSL 4 BASIC14.27□□□□□ -0.121e-8■■■□□ 19.2
XRN2Q9H0D6 NUMB-222ENST00000556700 529 ntTSL 414.15□□□□□ -0.143e-7■■■□□ 19.2
XRN2Q9H0D6 BAG6-249ENST00000441793 783 ntTSL 214□□□□□ -0.171e-8■■■□□ 19.2
XRN2Q9H0D6 OSBPL3-201ENST00000313367 6760 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.171e-8■■■□□ 19.2
XRN2Q9H0D6 SLC2A9-207ENST00000505506 567 ntTSL 213.93□□□□□ -0.182e-6■■■□□ 19.2
XRN2Q9H0D6 ISY1-RAB43-201ENST00000418265 4868 ntAPPRIS P1 TSL 2 BASIC13.87□□□□□ -0.191e-8■■■□□ 19.2
XRN2Q9H0D6 RAB43-203ENST00000393305 4215 ntAPPRIS P1 TSL 4 BASIC13.66□□□□□ -0.221e-8■■■□□ 19.2
XRN2Q9H0D6 PRMT5-211ENST00000553641 800 ntTSL 313.54□□□□□ -0.241e-8■■■□□ 19.2
XRN2Q9H0D6 RAB43-204ENST00000393307 4203 ntAPPRIS P1 TSL 4 BASIC13.39□□□□□ -0.271e-8■■■□□ 19.2
XRN2Q9H0D6 RAB43-205ENST00000393308 4193 ntAPPRIS P1 TSL 4 BASIC13.02□□□□□ -0.331e-8■■■□□ 19.2
XRN2Q9H0D6 SSBP4-215ENST00000625926 162 ntTSL 5 BASIC12.95□□□□□ -0.345e-6■■■□□ 19.2
XRN2Q9H0D6 PES1-205ENST00000405677 2708 ntTSL 2 BASIC12.81□□□□□ -0.361e-8■■■□□ 19.2
XRN2Q9H0D6 BAG6-247ENST00000439687 3104 ntTSL 2 BASIC12.44□□□□□ -0.421e-8■■■□□ 19.2
XRN2Q9H0D6 BAG6-237ENST00000375976 3644 ntAPPRIS P3 TSL 1 (best) BASIC12.4□□□□□ -0.421e-8■■■□□ 19.2
XRN2Q9H0D6 NUMB-206ENST00000553415 694 ntTSL 412.35□□□□□ -0.433e-7■■■□□ 19.2
XRN2Q9H0D6 MED24-212ENST00000501516 3037 ntTSL 5 BASIC12.17□□□□□ -0.461e-8■■■□□ 19.2
XRN2Q9H0D6 MED24-214ENST00000535508 3334 ntTSL 211.92□□□□□ -0.51e-8■■■□□ 19.2
XRN2Q9H0D6 KANSL1-211ENST00000575318 4935 ntTSL 5 BASIC11.84□□□□□ -0.511e-8■■■□□ 19.2
XRN2Q9H0D6 KANSL1-201ENST00000262419 5309 ntAPPRIS P3 TSL 1 (best) BASIC11.74□□□□□ -0.531e-8■■■□□ 19.2
XRN2Q9H0D6 KANSL1-208ENST00000574590 5147 ntAPPRIS ALT1 TSL 2 BASIC11.71□□□□□ -0.531e-8■■■□□ 19.2
XRN2Q9H0D6 MED24-204ENST00000394128 3479 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.551e-8■■■□□ 19.2
XRN2Q9H0D6 BAG6-235ENST00000362049 3626 ntTSL 2 BASIC11.53□□□□□ -0.561e-8■■■□□ 19.2
XRN2Q9H0D6 PRMT5-217ENST00000554910 577 ntTSL 411.36□□□□□ -0.591e-8■■■□□ 19.2
XRN2Q9H0D6 PES1-203ENST00000402281 2760 ntTSL 2 BASIC11.35□□□□□ -0.591e-8■■■□□ 19.2
XRN2Q9H0D6 MED24-203ENST00000394127 3456 ntTSL 2 BASIC11.15□□□□□ -0.621e-8■■■□□ 19.2
XRN2Q9H0D6 MED24-201ENST00000356271 3446 ntTSL 2 BASIC11.04□□□□□ -0.641e-8■■■□□ 19.2
XRN2Q9H0D6 NUMB-202ENST00000356296 3453 ntAPPRIS ALT1 TSL 1 (best) BASIC10.89□□□□□ -0.673e-7■■■□□ 19.2
XRN2Q9H0D6 MED24-202ENST00000394126 3896 ntTSL 1 (best) BASIC10.81□□□□□ -0.681e-8■■■□□ 19.2
Retrieved 100 of 21,068 protein–RNA pairs in 82.1 ms