Protein–RNA interactions for Protein: Q99684

GFI1, Zinc finger protein Gfi-1, humanhuman

Predictions only

Length 422 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GFI1Q99684 MFSD10-202ENST00000355443 1753 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
GFI1Q99684 A4GALT-201ENST00000249005 2020 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
GFI1Q99684 SAE1-201ENST00000270225 2049 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
GFI1Q99684 FAM49B-214ENST00000519540 2021 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
GFI1Q99684 RXRB-202ENST00000374685 2846 ntAPPRIS ALT1 TSL 1 (best) BASIC16.43■□□□□ 0.22
GFI1Q99684 PMAIP1-202ENST00000316660 1948 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
GFI1Q99684 NPEPL1-204ENST00000525967 1917 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
GFI1Q99684 GOLGA6L5P-202ENST00000515341 1828 ntBASIC16.43■□□□□ 0.22
GFI1Q99684 COPS7A-210ENST00000539735 1832 ntAPPRIS P1 TSL 5 BASIC16.43■□□□□ 0.22
GFI1Q99684 SMC5-AS1-201ENST00000594708 1818 ntTSL 2 BASIC16.43■□□□□ 0.22
GFI1Q99684 CCDC43-201ENST00000315286 2082 ntAPPRIS P2 TSL 1 (best) BASIC16.43■□□□□ 0.22
GFI1Q99684 HCK-202ENST00000375852 2082 ntAPPRIS ALT2 TSL 1 (best) BASIC16.43■□□□□ 0.22
GFI1Q99684 CNIH4-203ENST00000366858 702 ntTSL 3 BASIC16.43■□□□□ 0.22
GFI1Q99684 LCE2A-201ENST00000368779 592 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
GFI1Q99684 TNFRSF18-203ENST00000379268 1179 ntAPPRIS ALT2 TSL 1 (best) BASIC16.43■□□□□ 0.22
GFI1Q99684 AC004911.1-201ENST00000416316 871 ntBASIC16.43■□□□□ 0.22
GFI1Q99684 BX276092.2-201ENST00000417668 665 ntBASIC16.43■□□□□ 0.22
GFI1Q99684 EIF5A-205ENST00000419711 1271 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
GFI1Q99684 NME6-213ENST00000451657 871 ntTSL 2 BASIC16.43■□□□□ 0.22
GFI1Q99684 OR2A1-AS1-201ENST00000462305 773 ntBASIC16.43■□□□□ 0.22
GFI1Q99684 AC004889.1-204ENST00000474656 773 ntTSL 3 BASIC16.43■□□□□ 0.22
GFI1Q99684 HMX1-202ENST00000506970 651 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
GFI1Q99684 PLEKHJ1-205ENST00000587394 937 ntTSL 2 BASIC16.43■□□□□ 0.22
GFI1Q99684 SBDS-201ENST00000246868 1631 ntAPPRIS P2 TSL 1 (best) BASIC16.43■□□□□ 0.22
GFI1Q99684 UBE2K-201ENST00000261427 5245 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
GFI1Q99684 SNAP23-201ENST00000249647 2687 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
GFI1Q99684 YAP1-201ENST00000282441 5386 ntAPPRIS P3 TSL 1 (best) BASIC16.43■□□□□ 0.22
GFI1Q99684 GATB-213ENST00000515812 1893 ntTSL 5 BASIC16.43■□□□□ 0.22
GFI1Q99684 SPI1-202ENST00000378538 1403 ntAPPRIS P3 TSL 1 (best) BASIC16.43■□□□□ 0.22
GFI1Q99684 GTF2IP4-202ENST00000544802 3609 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
GFI1Q99684 DVL2-201ENST00000005340 3018 ntAPPRIS P2 TSL 1 (best) BASIC16.43■□□□□ 0.22
GFI1Q99684 KLC1-217ENST00000554280 2426 ntTSL 5 BASIC16.43■□□□□ 0.22
GFI1Q99684 AR-209ENST00000613054 3532 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
GFI1Q99684 ARSA-201ENST00000216124 2050 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
GFI1Q99684 FRS3-201ENST00000259748 2094 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
GFI1Q99684 IL6R-208ENST00000622330 1496 ntAPPRIS ALT2 TSL 1 (best) BASIC16.42■□□□□ 0.22
GFI1Q99684 PHF1-201ENST00000374512 2224 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
GFI1Q99684 FOXP1-214ENST00000493089 2703 ntAPPRIS ALT1 TSL 2 BASIC16.42■□□□□ 0.22
GFI1Q99684 NARFL-201ENST00000251588 2112 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
GFI1Q99684 REPS1-202ENST00000367663 2607 ntAPPRIS ALT1 TSL 5 BASIC16.42■□□□□ 0.22
GFI1Q99684 MARK2-209ENST00000509502 2862 ntAPPRIS ALT2 TSL 2 BASIC16.42■□□□□ 0.22
GFI1Q99684 TEFM-205ENST00000581216 1891 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
GFI1Q99684 TCP11-228ENST00000611141 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC16.42■□□□□ 0.22
GFI1Q99684 MYC-207ENST00000621592 2366 ntAPPRIS ALT1 TSL 1 (best) BASIC16.42■□□□□ 0.22
GFI1Q99684 BICRA-204ENST00000614245 5697 ntAPPRIS ALT2 TSL 5 BASIC16.42■□□□□ 0.22
GFI1Q99684 C9orf66-201ENST00000382387 2918 ntAPPRIS P1 BASIC16.42■□□□□ 0.22
GFI1Q99684 MLNR-201ENST00000218721 1239 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
GFI1Q99684 HES2-203ENST00000377837 1222 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
GFI1Q99684 PGPEP1L-201ENST00000378919 995 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
GFI1Q99684 NCF1B-202ENST00000432102 930 ntTSL 2 BASIC16.42■□□□□ 0.22
GFI1Q99684 RPLP2-207ENST00000530797 637 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
GFI1Q99684 YIF1B-213ENST00000591755 1077 ntTSL 2 BASIC16.42■□□□□ 0.22
GFI1Q99684 MDK-213ENST00000617138 635 ntTSL 2 BASIC16.42■□□□□ 0.22
GFI1Q99684 FNDC5-207ENST00000640867 639 ntAPPRIS P2 TSL 2 BASIC16.42■□□□□ 0.22
GFI1Q99684 HGFAC-201ENST00000382774 2159 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
GFI1Q99684 ATP9A-202ENST00000338821 8106 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
GFI1Q99684 MCOLN1-201ENST00000264079 2082 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
GFI1Q99684 LMNA-207ENST00000368301 2461 ntTSL 2 BASIC16.42■□□□□ 0.22
GFI1Q99684 TRAPPC2L-201ENST00000301021 2215 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
GFI1Q99684 RFC2-202ENST00000352131 1576 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
GFI1Q99684 SLC44A3-201ENST00000271227 2388 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
GFI1Q99684 UBE2E3-201ENST00000392415 1347 ntAPPRIS P1 TSL 3 BASIC16.42■□□□□ 0.22
GFI1Q99684 UBAP1-203ENST00000379186 2524 ntTSL 5 BASIC16.42■□□□□ 0.22
GFI1Q99684 HDAC10-201ENST00000216271 2687 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
GFI1Q99684 GAS2L1P1-201ENST00000420145 1480 ntBASIC16.42■□□□□ 0.22
GFI1Q99684 ESPNP-201ENST00000270691 2015 ntBASIC16.41■□□□□ 0.22
GFI1Q99684 FAM20A-205ENST00000592554 2955 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
GFI1Q99684 FARP2-202ENST00000373287 2580 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
GFI1Q99684 ZDHHC18-202ENST00000374142 5020 ntAPPRIS P2 TSL 1 (best) BASIC16.41■□□□□ 0.22
GFI1Q99684 AL499627.1-201ENST00000569373 2188 ntBASIC16.41■□□□□ 0.22
GFI1Q99684 MEST-201ENST00000223215 2465 ntAPPRIS P4 TSL 1 (best) BASIC16.41■□□□□ 0.22
GFI1Q99684 FEZF1-202ENST00000427185 1368 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
GFI1Q99684 MKRN4P-201ENST00000444706 1521 ntBASIC16.41■□□□□ 0.22
GFI1Q99684 RNPS1-202ENST00000320225 2241 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
GFI1Q99684 AL590648.2-201ENST00000427949 2225 ntTSL 2 BASIC16.41■□□□□ 0.22
GFI1Q99684 CRTC1-201ENST00000321949 2501 ntAPPRIS P3 TSL 1 (best) BASIC16.41■□□□□ 0.22
GFI1Q99684 ACSM2A-201ENST00000219054 1988 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
GFI1Q99684 BHLHA15-201ENST00000314018 706 ntAPPRIS P1 BASIC16.41■□□□□ 0.22
GFI1Q99684 PYCR3-202ENST00000377579 985 ntTSL 2 BASIC16.41■□□□□ 0.22
GFI1Q99684 ARL5A-202ENST00000428992 747 ntTSL 2 BASIC16.41■□□□□ 0.22
GFI1Q99684 FAM229A-204ENST00000432622 699 ntAPPRIS P2 TSL 2 BASIC16.41■□□□□ 0.22
GFI1Q99684 YIF1A-205ENST00000471387 854 ntTSL 5 BASIC16.41■□□□□ 0.22
GFI1Q99684 AC016065.1-203ENST00000523225 1017 ntTSL 3 BASIC16.41■□□□□ 0.22
GFI1Q99684 BHLHA15-202ENST00000609256 796 ntAPPRIS P1 TSL 3 BASIC16.41■□□□□ 0.22
GFI1Q99684 AL050303.2-201ENST00000619798 666 ntBASIC16.41■□□□□ 0.22
GFI1Q99684 HSD17B12-213ENST00000637401 866 ntTSL 4 BASIC16.41■□□□□ 0.22
GFI1Q99684 FARSA-202ENST00000423140 1720 ntTSL 2 BASIC16.41■□□□□ 0.22
GFI1Q99684 STK11-201ENST00000326873 2611 ntAPPRIS P2 TSL 1 (best) BASIC16.41■□□□□ 0.22
GFI1Q99684 ARNTL-201ENST00000389707 2776 ntAPPRIS P3 TSL 1 (best) BASIC16.41■□□□□ 0.22
GFI1Q99684 NFIX-205ENST00000585575 1485 ntAPPRIS P1 TSL 5 BASIC16.41■□□□□ 0.22
GFI1Q99684 STX5-202ENST00000377897 1785 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
GFI1Q99684 PFN2-203ENST00000452853 1780 ntAPPRIS ALT1 TSL 1 (best) BASIC16.41■□□□□ 0.22
GFI1Q99684 POC1B-GALNT4-201ENST00000547474 2207 ntTSL 2 BASIC16.41■□□□□ 0.22
GFI1Q99684 MTSS1L-201ENST00000338779 4992 ntAPPRIS P2 TSL 1 (best) BASIC16.4■□□□□ 0.22
GFI1Q99684 TEX264-204ENST00000415259 2290 ntAPPRIS P3 TSL 5 BASIC16.4■□□□□ 0.22
GFI1Q99684 EXOSC3-201ENST00000327304 1806 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
GFI1Q99684 BABAM1-213ENST00000601043 1366 ntAPPRIS P3 TSL 2 BASIC16.4■□□□□ 0.22
GFI1Q99684 NRXN2-201ENST00000265459 6621 ntAPPRIS P3 TSL 5 BASIC16.4■□□□□ 0.22
GFI1Q99684 TMC6-202ENST00000322914 2786 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
GFI1Q99684 C2CD2L-205ENST00000528586 2320 ntTSL 2 BASIC16.4■□□□□ 0.22
Retrieved 100 of 98,524 protein–RNA pairs in 52.8 ms