Protein–RNA interactions for Protein: Q96DD0

LRRC39, Leucine-rich repeat-containing protein 39, humanhuman

Predictions only

Length 335 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC39Q96DD0 GPT-202ENST00000394955 1885 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
LRRC39Q96DD0 CASR-204ENST00000638421 5088 ntAPPRIS P1 TSL 5 BASIC19.24■□□□□ 0.67
LRRC39Q96DD0 CCDC17-202ENST00000421127 2216 ntAPPRIS ALT2 TSL 2 BASIC19.24■□□□□ 0.67
LRRC39Q96DD0 STX5-202ENST00000377897 1785 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
LRRC39Q96DD0 EFTUD1P1-204ENST00000560401 1798 ntBASIC19.24■□□□□ 0.67
LRRC39Q96DD0 LIN28B-AS1-203ENST00000636682 1797 ntTSL 3 BASIC19.24■□□□□ 0.67
LRRC39Q96DD0 SDK1-202ENST00000404826 10397 ntAPPRIS P2 TSL 1 (best) BASIC19.24■□□□□ 0.67
LRRC39Q96DD0 CABP7-201ENST00000216144 3259 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
LRRC39Q96DD0 KRT13-202ENST00000336861 1673 ntAPPRIS ALT2 TSL 1 (best) BASIC19.24■□□□□ 0.67
LRRC39Q96DD0 CDC42EP2-201ENST00000279249 2023 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
LRRC39Q96DD0 MFSD1-201ENST00000264266 1594 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
LRRC39Q96DD0 NKD2-201ENST00000274150 1940 ntAPPRIS ALT2 TSL 1 (best) BASIC19.23■□□□□ 0.67
LRRC39Q96DD0 GCSH-201ENST00000315467 1597 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
LRRC39Q96DD0 ZNF213-201ENST00000396878 3313 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
LRRC39Q96DD0 HYOU1-212ENST00000532519 2162 ntTSL 5 BASIC19.23■□□□□ 0.67
LRRC39Q96DD0 LUC7L2-210ENST00000619796 2783 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
LRRC39Q96DD0 PDE8A-202ENST00000339708 2663 ntAPPRIS ALT2 TSL 1 (best) BASIC19.23■□□□□ 0.67
LRRC39Q96DD0 RGS3-231ENST00000613049 1726 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
LRRC39Q96DD0 WDTC1-201ENST00000319394 4819 ntAPPRIS ALT1 TSL 1 (best) BASIC19.23■□□□□ 0.67
LRRC39Q96DD0 ACADS-201ENST00000242592 1950 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
LRRC39Q96DD0 NOM1-201ENST00000275820 6077 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
LRRC39Q96DD0 ARRB1-201ENST00000360025 1895 ntAPPRIS P3 TSL 1 (best) BASIC19.23■□□□□ 0.67
LRRC39Q96DD0 ANG-201ENST00000336811 1222 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
LRRC39Q96DD0 SYNE2-201ENST00000341472 1132 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
LRRC39Q96DD0 LINC00969-218ENST00000452844 583 ntTSL 3 BASIC19.23■□□□□ 0.67
LRRC39Q96DD0 LINC00969-221ENST00000457233 1279 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
LRRC39Q96DD0 ZNF302-209ENST00000507959 854 ntTSL 2 BASIC19.23■□□□□ 0.67
LRRC39Q96DD0 AC005225.2-202ENST00000617980 408 ntTSL 4 BASIC19.23■□□□□ 0.67
LRRC39Q96DD0 IL15RA-222ENST00000622442 1160 ntAPPRIS ALT2 TSL 1 (best) BASIC19.23■□□□□ 0.67
LRRC39Q96DD0 MEN1-205ENST00000377316 2868 ntTSL 5 BASIC19.23■□□□□ 0.67
LRRC39Q96DD0 CLN8-211ENST00000636934 1790 ntTSL 5 BASIC19.23■□□□□ 0.67
LRRC39Q96DD0 SMPD3-201ENST00000219334 5453 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
LRRC39Q96DD0 PCSK7-201ENST00000320934 4649 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
LRRC39Q96DD0 FCMR-202ENST00000442471 1441 ntTSL 2 BASIC19.23■□□□□ 0.67
LRRC39Q96DD0 CNOT11-201ENST00000289382 2599 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
LRRC39Q96DD0 EMX2-203ENST00000553456 2897 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
LRRC39Q96DD0 LLGL2-203ENST00000392550 3509 ntAPPRIS P2 TSL 1 (best) BASIC19.22■□□□□ 0.67
LRRC39Q96DD0 AL390961.4-201ENST00000623958 2535 ntBASIC19.22■□□□□ 0.67
LRRC39Q96DD0 FAM91A1-201ENST00000334705 5511 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
LRRC39Q96DD0 MARK2-201ENST00000350490 2903 ntAPPRIS ALT2 TSL 1 (best) BASIC19.22■□□□□ 0.67
LRRC39Q96DD0 LRRC23-201ENST00000007969 1615 ntAPPRIS P4 TSL 1 (best) BASIC19.22■□□□□ 0.67
LRRC39Q96DD0 RABL2B-205ENST00000395595 2428 ntAPPRIS ALT2 TSL 1 (best) BASIC19.22■□□□□ 0.67
LRRC39Q96DD0 FMR1-207ENST00000439526 3699 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
LRRC39Q96DD0 PCCA-203ENST00000376286 2481 ntTSL 2 BASIC19.22■□□□□ 0.67
LRRC39Q96DD0 SEC11C-202ENST00000509791 2054 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
LRRC39Q96DD0 ANKRD29-201ENST00000322980 1658 ntTSL 2 BASIC19.22■□□□□ 0.67
LRRC39Q96DD0 LRP1-204ENST00000553277 1693 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
LRRC39Q96DD0 CKLF-201ENST00000264001 669 ntAPPRIS P4 TSL 1 (best) BASIC19.22■□□□□ 0.67
LRRC39Q96DD0 POMC-201ENST00000264708 1074 ntAPPRIS P1 TSL 2 BASIC19.22■□□□□ 0.67
LRRC39Q96DD0 GLRB-205ENST00000512619 728 ntTSL 3 BASIC19.22■□□□□ 0.67
LRRC39Q96DD0 IGFBP6-203ENST00000548547 1177 ntAPPRIS ALT2 TSL 5 BASIC19.22■□□□□ 0.67
LRRC39Q96DD0 CMTM3-207ENST00000564060 824 ntTSL 2 BASIC19.22■□□□□ 0.67
LRRC39Q96DD0 CMTM3-211ENST00000565922 615 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
LRRC39Q96DD0 LINC00654-202ENST00000589201 579 ntTSL 3 BASIC19.22■□□□□ 0.67
LRRC39Q96DD0 DEDD2-205ENST00000596251 1183 ntAPPRIS P3 TSL 1 (best) BASIC19.22■□□□□ 0.67
LRRC39Q96DD0 AC104771.1-201ENST00000603335 964 ntBASIC19.22■□□□□ 0.67
LRRC39Q96DD0 AC013268.1-201ENST00000639717 1208 ntTSL 5 BASIC19.22■□□□□ 0.67
LRRC39Q96DD0 GORASP1-206ENST00000422110 2523 ntTSL 2 BASIC19.22■□□□□ 0.67
LRRC39Q96DD0 IGFALS-202ENST00000415638 2136 ntTSL 2 BASIC19.22■□□□□ 0.67
LRRC39Q96DD0 WBP2-213ENST00000590221 1745 ntAPPRIS ALT1 TSL 3 BASIC19.22■□□□□ 0.67
LRRC39Q96DD0 PRR23B-201ENST00000329447 1896 ntAPPRIS P1 BASIC19.22■□□□□ 0.67
LRRC39Q96DD0 NFATC4-228ENST00000556759 2025 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
LRRC39Q96DD0 RIMBP3C-201ENST00000331505 5475 ntAPPRIS ALT2 BASIC19.21■□□□□ 0.67
LRRC39Q96DD0 LONP1-215ENST00000593119 2918 ntTSL 2 BASIC19.21■□□□□ 0.67
LRRC39Q96DD0 QKI-205ENST00000392127 7911 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
LRRC39Q96DD0 FGFBP3-201ENST00000311575 2545 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
LRRC39Q96DD0 LGI2-201ENST00000382114 6428 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
LRRC39Q96DD0 RABEPK-202ENST00000373538 1504 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
LRRC39Q96DD0 ZHX3-212ENST00000558993 1528 ntTSL 5 BASIC19.21■□□□□ 0.67
LRRC39Q96DD0 CIRBP-215ENST00000588030 1509 ntAPPRIS P3 TSL 5 BASIC19.21■□□□□ 0.67
LRRC39Q96DD0 DIO1-201ENST00000322679 1658 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
LRRC39Q96DD0 DIO1-217ENST00000617230 1656 ntTSL 5 BASIC19.21■□□□□ 0.67
LRRC39Q96DD0 CNTNAP3B-203ENST00000377561 5379 ntAPPRIS P2 TSL 1 (best) BASIC19.21■□□□□ 0.67
LRRC39Q96DD0 TWF1-201ENST00000395510 3045 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
LRRC39Q96DD0 WWC3-201ENST00000380861 6647 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
LRRC39Q96DD0 TUBA4A-201ENST00000248437 2162 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
LRRC39Q96DD0 TMEM206-201ENST00000261455 2475 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
LRRC39Q96DD0 PARL-201ENST00000311101 1240 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
LRRC39Q96DD0 MAFG-201ENST00000357736 5040 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
LRRC39Q96DD0 EP300-AS1-201ENST00000420537 457 ntTSL 3 BASIC19.21■□□□□ 0.67
LRRC39Q96DD0 Z98884.1-201ENST00000451646 830 ntTSL 3 BASIC19.21■□□□□ 0.67
LRRC39Q96DD0 LINC01881-205ENST00000456398 1235 ntTSL 5 BASIC19.21■□□□□ 0.67
LRRC39Q96DD0 ZNF529-AS1-202ENST00000475219 1033 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
LRRC39Q96DD0 AC108693.2-201ENST00000492981 303 ntTSL 3 BASIC19.21■□□□□ 0.67
LRRC39Q96DD0 TPGS2-221ENST00000614939 1268 ntTSL 4 BASIC19.21■□□□□ 0.67
LRRC39Q96DD0 NRXN1-208ENST00000405472 5724 ntAPPRIS ALT2 TSL 5 BASIC19.21■□□□□ 0.67
LRRC39Q96DD0 LSM4-203ENST00000593829 1908 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
LRRC39Q96DD0 CEACAM3-202ENST00000357396 1316 ntAPPRIS P3 TSL 1 (best) BASIC19.21■□□□□ 0.67
LRRC39Q96DD0 KRBOX1-AS1-201ENST00000447834 2134 ntTSL 2 BASIC19.21■□□□□ 0.67
LRRC39Q96DD0 NCK1-207ENST00000481752 1971 ntAPPRIS P1 TSL 5 BASIC19.21■□□□□ 0.67
LRRC39Q96DD0 HOXC6-202ENST00000394331 2943 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
LRRC39Q96DD0 CELF2-217ENST00000638035 1849 ntAPPRIS P3 TSL 5 BASIC19.21■□□□□ 0.67
LRRC39Q96DD0 FBXO41-204ENST00000520530 3293 ntAPPRIS P1 TSL 5 BASIC19.2■□□□□ 0.66
LRRC39Q96DD0 MYO9A-214ENST00000566885 5111 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
LRRC39Q96DD0 TCP11-204ENST00000373979 1882 ntAPPRIS P3 TSL 5 BASIC19.2■□□□□ 0.66
LRRC39Q96DD0 LZTS2-202ENST00000370223 2883 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
LRRC39Q96DD0 C1orf198-201ENST00000366663 3858 ntAPPRIS P3 TSL 1 (best) BASIC19.2■□□□□ 0.66
LRRC39Q96DD0 P3H1-204ENST00000397054 2705 ntAPPRIS ALT2 TSL 1 (best) BASIC19.2■□□□□ 0.66
LRRC39Q96DD0 DNM1-206ENST00000475805 2710 ntAPPRIS ALT1 TSL 2 BASIC19.2■□□□□ 0.66
LRRC39Q96DD0 SIGIRR-202ENST00000397632 1598 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Retrieved 100 of 98,524 protein–RNA pairs in 20.9 ms