Protein–RNA interactions for Protein: Q96AJ9

VTI1A, Vesicle transport through interaction with t-SNAREs homolog 1A, humanhuman

Predictions only

Length 217 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1AQ96AJ9 ACAP3-201ENST00000353662 2280 ntTSL 1 (best) BASIC21.48■■□□□ 1.03
VTI1AQ96AJ9 USP21-203ENST00000368002 2342 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
VTI1AQ96AJ9 CD1E-210ENST00000368165 1003 ntAPPRIS ALT2 TSL 1 (best) BASIC21.48■■□□□ 1.03
VTI1AQ96AJ9 NEURL2-201ENST00000372518 1278 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
VTI1AQ96AJ9 CR769775.1-204ENST00000439760 747 ntTSL 5 BASIC21.48■■□□□ 1.03
VTI1AQ96AJ9 CD1E-214ENST00000452291 745 ntTSL 1 (best) BASIC21.48■■□□□ 1.03
VTI1AQ96AJ9 HIGD1A-204ENST00000452906 585 ntTSL 2 BASIC21.48■■□□□ 1.03
VTI1AQ96AJ9 SNX5-210ENST00000481323 562 ntTSL 3 BASIC21.48■■□□□ 1.03
VTI1AQ96AJ9 NDUFV2-AS1-203ENST00000608008 779 ntBASIC21.48■■□□□ 1.03
VTI1AQ96AJ9 AC116407.4-201ENST00000623319 1061 ntBASIC21.48■■□□□ 1.03
VTI1AQ96AJ9 CSPG5-201ENST00000264723 4080 ntAPPRIS P3 TSL 1 (best) BASIC21.48■■□□□ 1.03
VTI1AQ96AJ9 JAKMIP1-201ENST00000282924 2585 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
VTI1AQ96AJ9 KIAA1456-201ENST00000400069 1982 ntTSL 2 BASIC21.48■■□□□ 1.03
VTI1AQ96AJ9 CYB561-205ENST00000542042 1302 ntTSL 2 BASIC21.48■■□□□ 1.03
VTI1AQ96AJ9 VLDLR-AS1-205ENST00000599229 1346 ntTSL 1 (best) BASIC21.48■■□□□ 1.03
VTI1AQ96AJ9 ACBD4-204ENST00000431281 2026 ntTSL 5 BASIC21.48■■□□□ 1.03
VTI1AQ96AJ9 AP001271.2-201ENST00000624018 1556 ntBASIC21.48■■□□□ 1.03
VTI1AQ96AJ9 SH2B3-201ENST00000341259 5406 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
VTI1AQ96AJ9 TPBGL-201ENST00000562197 2793 ntAPPRIS P1 BASIC21.48■■□□□ 1.03
VTI1AQ96AJ9 JPT1-203ENST00000409753 1605 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
VTI1AQ96AJ9 CPAMD8-202ENST00000388925 5355 ntTSL 5 BASIC21.47■■□□□ 1.03
VTI1AQ96AJ9 FAM43B-201ENST00000332947 2572 ntAPPRIS P1 BASIC21.47■■□□□ 1.03
VTI1AQ96AJ9 MRM1-204ENST00000614766 1857 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
VTI1AQ96AJ9 KCNS2-201ENST00000287042 5219 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
VTI1AQ96AJ9 CALHM3-201ENST00000369783 1652 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
VTI1AQ96AJ9 SAMD5-201ENST00000367474 6089 ntAPPRIS P1 TSL 2 BASIC21.47■■□□□ 1.03
VTI1AQ96AJ9 GALE-201ENST00000374497 1488 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
VTI1AQ96AJ9 RRAS-201ENST00000246792 1044 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
VTI1AQ96AJ9 NMRK1-202ENST00000376808 1121 ntTSL 1 (best) BASIC21.47■■□□□ 1.03
VTI1AQ96AJ9 AC026396.1-201ENST00000419388 421 ntBASIC21.47■■□□□ 1.03
VTI1AQ96AJ9 APBB3-216ENST00000511201 1014 ntTSL 5 BASIC21.47■■□□□ 1.03
VTI1AQ96AJ9 MVB12A-204ENST00000528515 686 ntTSL 5 BASIC21.47■■□□□ 1.03
VTI1AQ96AJ9 GRP-204ENST00000529320 824 ntAPPRIS ALT2 TSL 1 (best) BASIC21.47■■□□□ 1.03
VTI1AQ96AJ9 AP1S2-206ENST00000545766 576 ntTSL 1 (best) BASIC21.47■■□□□ 1.03
VTI1AQ96AJ9 MRPL46-202ENST00000558531 1002 ntTSL 2 BASIC21.47■■□□□ 1.03
VTI1AQ96AJ9 SLF2-205ENST00000609386 891 ntAPPRIS ALT2 BASIC21.47■■□□□ 1.03
VTI1AQ96AJ9 SETD3-209ENST00000630307 1281 ntTSL 5 BASIC21.47■■□□□ 1.03
VTI1AQ96AJ9 CLN6-214ENST00000636314 442 ntTSL 3 BASIC21.47■■□□□ 1.03
VTI1AQ96AJ9 SLC36A1-209ENST00000521925 1621 ntTSL 1 (best) BASIC21.47■■□□□ 1.03
VTI1AQ96AJ9 NFE2L1-204ENST00000536222 2172 ntTSL 2 BASIC21.47■■□□□ 1.03
VTI1AQ96AJ9 CADPS2-201ENST00000313070 6065 ntTSL 5 BASIC21.47■■□□□ 1.03
VTI1AQ96AJ9 AR-204ENST00000504326 3615 ntTSL 1 (best) BASIC21.47■■□□□ 1.03
VTI1AQ96AJ9 SCUBE1-201ENST00000290460 2258 ntTSL 1 (best) BASIC21.46■■□□□ 1.03
VTI1AQ96AJ9 BEST4-201ENST00000372207 2047 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
VTI1AQ96AJ9 SPAG4-201ENST00000374273 1453 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
VTI1AQ96AJ9 TMEM235-203ENST00000550981 1786 ntTSL 2 BASIC21.46■■□□□ 1.03
VTI1AQ96AJ9 MUS81-201ENST00000308110 2392 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
VTI1AQ96AJ9 NPNT-214ENST00000514622 2362 ntTSL 2 BASIC21.46■■□□□ 1.03
VTI1AQ96AJ9 KCTD1-202ENST00000408011 2103 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
VTI1AQ96AJ9 P4HB-203ENST00000439918 1502 ntTSL 5 BASIC21.46■■□□□ 1.03
VTI1AQ96AJ9 MOK-225ENST00000522867 1883 ntTSL 5 BASIC21.46■■□□□ 1.03
VTI1AQ96AJ9 DPH1-201ENST00000263083 2221 ntAPPRIS P2 TSL 1 (best) BASIC21.46■■□□□ 1.03
VTI1AQ96AJ9 SHANK1-203ENST00000391813 4785 ntTSL 1 (best) BASIC21.46■■□□□ 1.03
VTI1AQ96AJ9 BUD23-201ENST00000265758 1230 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
VTI1AQ96AJ9 SPATA22-202ENST00000355380 1216 ntTSL 1 (best) BASIC21.46■■□□□ 1.03
VTI1AQ96AJ9 AP000523.1-201ENST00000398242 1049 ntBASIC21.46■■□□□ 1.03
VTI1AQ96AJ9 LINC00421-201ENST00000413833 1054 ntTSL 1 (best) BASIC21.46■■□□□ 1.03
VTI1AQ96AJ9 AC112907.2-201ENST00000448639 330 ntBASIC21.46■■□□□ 1.03
VTI1AQ96AJ9 KCNMA1-220ENST00000481070 896 ntTSL 2 BASIC21.46■■□□□ 1.03
VTI1AQ96AJ9 AC019068.1-202ENST00000483218 768 ntTSL 3 BASIC21.46■■□□□ 1.03
VTI1AQ96AJ9 TESMIN-209ENST00000544963 1235 ntTSL 1 (best) BASIC21.46■■□□□ 1.03
VTI1AQ96AJ9 AC008622.2-201ENST00000617006 1229 ntBASIC21.46■■□□□ 1.03
VTI1AQ96AJ9 VPS72-207ENST00000640458 689 ntTSL 5 BASIC21.46■■□□□ 1.03
VTI1AQ96AJ9 TH-206ENST00000381178 1910 ntTSL 1 (best) BASIC21.46■■□□□ 1.03
VTI1AQ96AJ9 TMEFF1-201ENST00000374879 2611 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
VTI1AQ96AJ9 GJA8-201ENST00000369235 1302 ntAPPRIS P1 BASIC21.46■■□□□ 1.03
VTI1AQ96AJ9 WWOX-205ENST00000539474 1670 ntTSL 5 BASIC21.46■■□□□ 1.03
VTI1AQ96AJ9 SOX8-201ENST00000293894 3049 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
VTI1AQ96AJ9 GALNS-201ENST00000268695 2363 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
VTI1AQ96AJ9 AFG3L1P-217ENST00000557444 2447 ntBASIC21.46■■□□□ 1.03
VTI1AQ96AJ9 SSBP2-218ENST00000514493 1790 ntTSL 1 (best) BASIC21.46■■□□□ 1.03
VTI1AQ96AJ9 WNK2-204ENST00000427277 6108 ntTSL 5 BASIC21.46■■□□□ 1.03
VTI1AQ96AJ9 OGG1-204ENST00000339511 1815 ntTSL 2 BASIC21.45■■□□□ 1.03
VTI1AQ96AJ9 CRTC1-204ENST00000601916 1834 ntTSL 5 BASIC21.45■■□□□ 1.03
VTI1AQ96AJ9 VSTM2B-201ENST00000335523 1488 ntAPPRIS P1 TSL 5 BASIC21.45■■□□□ 1.03
VTI1AQ96AJ9 TXNDC5-201ENST00000379757 2964 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.03
VTI1AQ96AJ9 FAM129C-205ENST00000595684 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC21.45■■□□□ 1.02
VTI1AQ96AJ9 FAM214B-203ENST00000378561 5771 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
VTI1AQ96AJ9 SSBP3-216ENST00000610401 3168 ntTSL 5 BASIC21.45■■□□□ 1.02
VTI1AQ96AJ9 TOR1A-201ENST00000351698 2076 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
VTI1AQ96AJ9 FAM131A-204ENST00000418281 1664 ntTSL 5 BASIC21.45■■□□□ 1.02
VTI1AQ96AJ9 COMTD1-201ENST00000372538 976 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
VTI1AQ96AJ9 ST6GALNAC4P1-201ENST00000435385 499 ntBASIC21.45■■□□□ 1.02
VTI1AQ96AJ9 LMCD1-AS1-204ENST00000446281 932 ntTSL 5 BASIC21.45■■□□□ 1.02
VTI1AQ96AJ9 PDZD7-203ENST00000470414 1057 ntTSL 2 BASIC21.45■■□□□ 1.02
VTI1AQ96AJ9 AC127526.4-201ENST00000527970 983 ntTSL 3 BASIC21.45■■□□□ 1.02
VTI1AQ96AJ9 TRAF7-205ENST00000567653 666 ntTSL 2 BASIC21.45■■□□□ 1.02
VTI1AQ96AJ9 ZNF667-AS1-206ENST00000591797 535 ntTSL 5 BASIC21.45■■□□□ 1.02
VTI1AQ96AJ9 CLEC4GP1-201ENST00000596555 870 ntBASIC21.45■■□□□ 1.02
VTI1AQ96AJ9 TMEM79-201ENST00000295694 2191 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
VTI1AQ96AJ9 CIRBP-201ENST00000320936 1328 ntAPPRIS P3 TSL 1 (best) BASIC21.45■■□□□ 1.02
VTI1AQ96AJ9 AKIRIN1-201ENST00000372984 1330 ntTSL 2 BASIC21.45■■□□□ 1.02
VTI1AQ96AJ9 CIRBP-207ENST00000586472 1303 ntAPPRIS P3 TSL 3 BASIC21.45■■□□□ 1.02
VTI1AQ96AJ9 NTMT1-211ENST00000617943 1346 ntTSL 3 BASIC21.45■■□□□ 1.02
VTI1AQ96AJ9 CASP9-210ENST00000546424 4463 ntAPPRIS ALT2 TSL 5 BASIC21.45■■□□□ 1.02
VTI1AQ96AJ9 SSR1-204ENST00000474597 1808 ntTSL 5 BASIC21.45■■□□□ 1.02
VTI1AQ96AJ9 FAM212B-203ENST00000444059 1423 ntTSL 1 (best) BASIC21.45■■□□□ 1.02
VTI1AQ96AJ9 CCNC-207ENST00000518714 1426 ntTSL 5 BASIC21.45■■□□□ 1.02
VTI1AQ96AJ9 KRT17-205ENST00000540235 1438 ntTSL 5 BASIC21.45■■□□□ 1.02
VTI1AQ96AJ9 KCTD12-201ENST00000377474 6225 ntAPPRIS P1 BASIC21.45■■□□□ 1.02
Retrieved 100 of 98,524 protein–RNA pairs in 30.2 ms