Protein–RNA interactions for Protein: Q8TCY0

SMIM11B, Small integral membrane protein 11B, humanhuman

Predictions only

Length 68 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMIM11BQ8TCY0 KRT16P6-201ENST00000417510 1873 ntTSL 5 BASIC12.38□□□□□ -0.43
SMIM11BQ8TCY0 TBC1D20-201ENST00000354200 4466 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
SMIM11BQ8TCY0 JADE3-204ENST00000614628 4934 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
SMIM11BQ8TCY0 TRAPPC11-201ENST00000334690 4552 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
SMIM11BQ8TCY0 PPM1D-204ENST00000629650 1525 ntTSL 5 BASIC12.38□□□□□ -0.43
SMIM11BQ8TCY0 MCOLN1-201ENST00000264079 2082 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
SMIM11BQ8TCY0 LRCH2-202ENST00000538422 4868 ntAPPRIS ALT2 TSL 1 (best) BASIC12.38□□□□□ -0.43
SMIM11BQ8TCY0 SYNE3-202ENST00000553340 2615 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
SMIM11BQ8TCY0 DDX17-211ENST00000640332 2190 ntAPPRIS P3 TSL 1 (best) BASIC12.38□□□□□ -0.43
SMIM11BQ8TCY0 DDX17-212ENST00000640668 2196 ntAPPRIS ALT2 TSL 1 (best) BASIC12.38□□□□□ -0.43
SMIM11BQ8TCY0 ISY1-201ENST00000273541 1704 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
SMIM11BQ8TCY0 WDR88-201ENST00000355868 1718 ntAPPRIS P2 TSL 2 BASIC12.38□□□□□ -0.43
SMIM11BQ8TCY0 P2RX2-205ENST00000352418 1200 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
SMIM11BQ8TCY0 LYPD2-201ENST00000359228 594 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
SMIM11BQ8TCY0 POLR2H-204ENST00000438240 994 ntTSL 3 BASIC12.38□□□□□ -0.43
SMIM11BQ8TCY0 RPRD1A-207ENST00000588737 1264 ntTSL 2 BASIC12.38□□□□□ -0.43
SMIM11BQ8TCY0 MTHFD2L-203ENST00000395759 2354 ntAPPRIS P2 TSL 5 BASIC12.38□□□□□ -0.43
SMIM11BQ8TCY0 SKOR1-204ENST00000554240 3597 ntAPPRIS ALT2 TSL 5 BASIC12.38□□□□□ -0.43
SMIM11BQ8TCY0 TLCD2-201ENST00000330676 5971 ntAPPRIS P1 TSL 2 BASIC12.38□□□□□ -0.43
SMIM11BQ8TCY0 CAPZB-205ENST00000433834 1462 ntTSL 2 BASIC12.38□□□□□ -0.43
SMIM11BQ8TCY0 CHAC1-205ENST00000617961 1498 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
SMIM11BQ8TCY0 IFFO1-201ENST00000336604 2686 ntAPPRIS P3 TSL 1 (best) BASIC12.38□□□□□ -0.43
SMIM11BQ8TCY0 OTOP2-201ENST00000331427 2147 ntAPPRIS P1 TSL 5 BASIC12.38□□□□□ -0.43
SMIM11BQ8TCY0 IDUA-210ENST00000514224 2130 ntTSL 2 BASIC12.38□□□□□ -0.43
SMIM11BQ8TCY0 AL162741.1-201ENST00000565563 1558 ntBASIC12.38□□□□□ -0.43
SMIM11BQ8TCY0 NUDT19-201ENST00000397061 2967 ntAPPRIS P1 TSL 2 BASIC12.38□□□□□ -0.43
SMIM11BQ8TCY0 FADS1-204ENST00000433932 1690 ntTSL 2 BASIC12.38□□□□□ -0.43
SMIM11BQ8TCY0 PPP2R2C-206ENST00000507294 1667 ntTSL 2 BASIC12.38□□□□□ -0.43
SMIM11BQ8TCY0 KDM4B-202ENST00000381759 3058 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
SMIM11BQ8TCY0 MARCH1-203ENST00000503008 5877 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
SMIM11BQ8TCY0 KRT7-201ENST00000331817 1754 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
SMIM11BQ8TCY0 DOC2A-208ENST00000564944 1782 ntAPPRIS P1 TSL 5 BASIC12.38□□□□□ -0.43
SMIM11BQ8TCY0 GCSH-208ENST00000639169 2537 ntTSL 2 BASIC12.38□□□□□ -0.43
SMIM11BQ8TCY0 CALHM2-201ENST00000260743 1859 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
SMIM11BQ8TCY0 FAM46A-201ENST00000320172 5609 ntAPPRIS P2 TSL 1 (best) BASIC12.38□□□□□ -0.43
SMIM11BQ8TCY0 KLHL22-201ENST00000328879 2616 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
SMIM11BQ8TCY0 HOXD10-201ENST00000249501 1989 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
SMIM11BQ8TCY0 P2RX5-203ENST00000547178 1998 ntAPPRIS ALT2 TSL 1 (best) BASIC12.38□□□□□ -0.43
SMIM11BQ8TCY0 MTCL1-205ENST00000517570 6009 ntAPPRIS ALT2 TSL 1 (best) BASIC12.38□□□□□ -0.43
SMIM11BQ8TCY0 PTGDR-201ENST00000306051 2942 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
SMIM11BQ8TCY0 TFEB-206ENST00000403298 2162 ntAPPRIS P1 TSL 5 BASIC12.37□□□□□ -0.43
SMIM11BQ8TCY0 NABP2-202ENST00000341463 1411 ntAPPRIS P1 TSL 3 BASIC12.37□□□□□ -0.43
SMIM11BQ8TCY0 BAIAP2-203ENST00000416299 1442 ntTSL 2 BASIC12.37□□□□□ -0.43
SMIM11BQ8TCY0 ZDHHC24-203ENST00000526986 1424 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
SMIM11BQ8TCY0 TCIRG1-201ENST00000265686 2677 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
SMIM11BQ8TCY0 CNOT9-209ENST00000627282 1621 ntTSL 2 BASIC12.37□□□□□ -0.43
SMIM11BQ8TCY0 AC073592.3-201ENST00000625118 1834 ntBASIC12.37□□□□□ -0.43
SMIM11BQ8TCY0 FAM87B-201ENST00000326734 1947 ntTSL 2 BASIC12.37□□□□□ -0.43
SMIM11BQ8TCY0 RRAGD-202ENST00000369415 4900 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
SMIM11BQ8TCY0 AC126763.1-201ENST00000552015 2118 ntBASIC12.37□□□□□ -0.43
SMIM11BQ8TCY0 CDK11A-203ENST00000357760 2446 ntAPPRIS ALT1 TSL 1 (best) BASIC12.37□□□□□ -0.43
SMIM11BQ8TCY0 CDK11A-204ENST00000358779 2419 ntAPPRIS ALT1 TSL 1 (best) BASIC12.37□□□□□ -0.43
SMIM11BQ8TCY0 CDK11A-206ENST00000378638 2429 ntTSL 5 BASIC12.37□□□□□ -0.43
SMIM11BQ8TCY0 CDK11A-208ENST00000404249 2449 ntAPPRIS P4 TSL 1 (best) BASIC12.37□□□□□ -0.43
SMIM11BQ8TCY0 PGAP1-204ENST00000409475 2443 ntTSL 2 BASIC12.37□□□□□ -0.43
SMIM11BQ8TCY0 KDM4B-201ENST00000159111 5593 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
SMIM11BQ8TCY0 PRADC1-201ENST00000258083 1083 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
SMIM11BQ8TCY0 FAM207A-201ENST00000291634 927 ntAPPRIS P3 TSL 1 (best) BASIC12.37□□□□□ -0.43
SMIM11BQ8TCY0 NT5C3AP1-201ENST00000394500 1012 ntBASIC12.37□□□□□ -0.43
SMIM11BQ8TCY0 AC092468.1-201ENST00000491321 562 ntTSL 4 BASIC12.37□□□□□ -0.43
SMIM11BQ8TCY0 AC008443.4-201ENST00000503314 456 ntTSL 4 BASIC12.37□□□□□ -0.43
SMIM11BQ8TCY0 LINC02199-202ENST00000510067 1008 ntTSL 2 BASIC12.37□□□□□ -0.43
SMIM11BQ8TCY0 AC022509.3-202ENST00000545819 566 ntTSL 3 BASIC12.37□□□□□ -0.43
SMIM11BQ8TCY0 ACAP1-206ENST00000571471 320 ntTSL 2 BASIC12.37□□□□□ -0.43
SMIM11BQ8TCY0 AP001160.3-201ENST00000601484 763 ntBASIC12.37□□□□□ -0.43
SMIM11BQ8TCY0 RPS6-203ENST00000380384 1355 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
SMIM11BQ8TCY0 IKBIP-203ENST00000393042 1368 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
SMIM11BQ8TCY0 PDLIM2-205ENST00000397761 1491 ntAPPRIS P1 TSL 5 BASIC12.37□□□□□ -0.43
SMIM11BQ8TCY0 RAB34-201ENST00000301043 1592 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
SMIM11BQ8TCY0 GTF2H4-202ENST00000376316 1673 ntAPPRIS P1 TSL 5 BASIC12.37□□□□□ -0.43
SMIM11BQ8TCY0 ZNF787-202ENST00000587279 1657 ntTSL 2 BASIC12.37□□□□□ -0.43
SMIM11BQ8TCY0 HHATL-201ENST00000310417 1750 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
SMIM11BQ8TCY0 SIRPAP1-201ENST00000448467 1770 ntBASIC12.37□□□□□ -0.43
SMIM11BQ8TCY0 C6orf47-202ENST00000375911 2475 ntAPPRIS P1 BASIC12.37□□□□□ -0.43
SMIM11BQ8TCY0 ADO-201ENST00000373783 3627 ntAPPRIS P1 BASIC12.37□□□□□ -0.43
SMIM11BQ8TCY0 KSR1-201ENST00000268763 2806 ntAPPRIS ALT2 TSL 5 BASIC12.37□□□□□ -0.43
SMIM11BQ8TCY0 PTTG1IP-203ENST00000397887 2413 ntTSL 4 BASIC12.37□□□□□ -0.43
SMIM11BQ8TCY0 RSBN1-205ENST00000615321 2418 ntTSL 2 BASIC12.37□□□□□ -0.43
SMIM11BQ8TCY0 ICA1-201ENST00000265577 2309 ntAPPRIS ALT1 TSL 5 BASIC12.37□□□□□ -0.43
SMIM11BQ8TCY0 ISLR2-202ENST00000419208 2306 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
SMIM11BQ8TCY0 AL590648.2-201ENST00000427949 2225 ntTSL 2 BASIC12.37□□□□□ -0.43
SMIM11BQ8TCY0 SLC39A1-210ENST00000617697 2214 ntAPPRIS P1 TSL 5 BASIC12.37□□□□□ -0.43
SMIM11BQ8TCY0 AL096870.2-201ENST00000565988 2108 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
SMIM11BQ8TCY0 A4GALT-201ENST00000249005 2020 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
SMIM11BQ8TCY0 RGS3-231ENST00000613049 1726 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
SMIM11BQ8TCY0 CD151-201ENST00000322008 1548 ntAPPRIS P2 TSL 1 (best) BASIC12.37□□□□□ -0.43
SMIM11BQ8TCY0 GRAMD2B-218ENST00000542322 2977 ntTSL 2 BASIC12.36□□□□□ -0.43
SMIM11BQ8TCY0 TDRKH-207ENST00000458431 2768 ntAPPRIS P2 TSL 1 (best) BASIC12.36□□□□□ -0.43
SMIM11BQ8TCY0 SLC27A2-202ENST00000380902 2181 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
SMIM11BQ8TCY0 GNAS-203ENST00000306120 1878 ntBASIC12.36□□□□□ -0.43
SMIM11BQ8TCY0 MEPCE-201ENST00000310512 3030 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
SMIM11BQ8TCY0 ARHGAP6-202ENST00000337414 5117 ntAPPRIS P4 TSL 1 (best) BASIC12.36□□□□□ -0.43
SMIM11BQ8TCY0 RAB23-202ENST00000468148 4837 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
SMIM11BQ8TCY0 STK11-201ENST00000326873 2611 ntAPPRIS P2 TSL 1 (best) BASIC12.36□□□□□ -0.43
SMIM11BQ8TCY0 SPAG6-203ENST00000376624 2605 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
SMIM11BQ8TCY0 TSLP-203ENST00000420978 2621 ntAPPRIS ALT2 TSL 1 (best) BASIC12.36□□□□□ -0.43
SMIM11BQ8TCY0 CDKN1C-203ENST00000430149 1570 ntAPPRIS P3 TSL 1 (best) BASIC12.36□□□□□ -0.43
SMIM11BQ8TCY0 CYP21A1P-202ENST00000354927 1481 ntBASIC12.36□□□□□ -0.43
SMIM11BQ8TCY0 KRT19-201ENST00000361566 1390 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
SMIM11BQ8TCY0 LLGL2-202ENST00000375227 1374 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
Retrieved 100 of 98,524 protein–RNA pairs in 26 ms