Protein–RNA interactions for Protein: Q8NET4

RTL9, Retrotransposon Gag-like protein 9, humanhuman

Predictions only

Length 1,388 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTL9Q8NET4 TMEM218-206ENST00000527766 812 ntAPPRIS P1 TSL 3 BASIC23.46■■□□□ 1.35
RTL9Q8NET4 KCTD10-211ENST00000540411 866 ntTSL 1 (best) BASIC23.46■■□□□ 1.35
RTL9Q8NET4 AP1S2-206ENST00000545766 576 ntTSL 1 (best) BASIC23.46■■□□□ 1.35
RTL9Q8NET4 AL133352.1-203ENST00000557395 1234 ntAPPRIS P5 TSL 2 BASIC23.46■■□□□ 1.35
RTL9Q8NET4 PNMA8A-203ENST00000602246 572 ntAPPRIS ALT2 TSL 4 BASIC23.46■■□□□ 1.35
RTL9Q8NET4 MARK4-211ENST00000622871 1147 ntTSL 1 (best) BASIC23.46■■□□□ 1.35
RTL9Q8NET4 SMIM29-209ENST00000636500 1186 ntTSL 1 (best) BASIC23.46■■□□□ 1.35
RTL9Q8NET4 BLCAP-208ENST00000414542 2205 ntAPPRIS P1 TSL 3 BASIC23.46■■□□□ 1.35
RTL9Q8NET4 TPD52-211ENST00000519303 1594 ntTSL 1 (best) BASIC23.46■■□□□ 1.35
RTL9Q8NET4 AC006001.3-204ENST00000638711 2103 ntTSL 5 BASIC23.46■■□□□ 1.35
RTL9Q8NET4 SYT8-202ENST00000381968 1424 ntAPPRIS P2 TSL 5 BASIC23.45■■□□□ 1.35
RTL9Q8NET4 FCMR-202ENST00000442471 1441 ntTSL 2 BASIC23.45■■□□□ 1.35
RTL9Q8NET4 ERLEC1-202ENST00000378239 2271 ntAPPRIS ALT2 TSL 1 (best) BASIC23.45■■□□□ 1.35
RTL9Q8NET4 RASSF7-205ENST00000454668 1450 ntAPPRIS ALT2 TSL 1 (best) BASIC23.45■■□□□ 1.35
RTL9Q8NET4 OTOP2-201ENST00000331427 2147 ntAPPRIS P1 TSL 5 BASIC23.45■■□□□ 1.34
RTL9Q8NET4 CHTOP-202ENST00000368687 1094 ntTSL 1 (best) BASIC23.45■■□□□ 1.34
RTL9Q8NET4 GAD2-202ENST00000376248 680 ntTSL 5 BASIC23.45■■□□□ 1.34
RTL9Q8NET4 PDLIM7-205ENST00000393551 1226 ntTSL 1 (best) BASIC23.45■■□□□ 1.34
RTL9Q8NET4 UBE2F-205ENST00000414443 2100 ntTSL 2 BASIC23.45■■□□□ 1.34
RTL9Q8NET4 FAM41C-202ENST00000432963 504 ntTSL 2 BASIC23.45■■□□□ 1.34
RTL9Q8NET4 TMEM243-203ENST00000433078 1273 ntAPPRIS P1 TSL 2 BASIC23.45■■□□□ 1.34
RTL9Q8NET4 SPDYE13P-201ENST00000445314 798 ntBASIC23.45■■□□□ 1.34
RTL9Q8NET4 AC106771.1-201ENST00000502209 372 ntTSL 2 BASIC23.45■■□□□ 1.34
RTL9Q8NET4 CHRNB1-207ENST00000575379 1095 ntTSL 2 BASIC23.45■■□□□ 1.34
RTL9Q8NET4 MIR3180-5-201ENST00000583743 153 ntBASIC23.45■■□□□ 1.34
RTL9Q8NET4 MLST8-202ENST00000382450 1861 ntAPPRIS ALT1 TSL 2 BASIC23.45■■□□□ 1.34
RTL9Q8NET4 MLST8-215ENST00000564088 1861 ntAPPRIS P3 TSL 2 BASIC23.45■■□□□ 1.34
RTL9Q8NET4 DEDD2-204ENST00000595337 1894 ntAPPRIS P3 TSL 3 BASIC23.45■■□□□ 1.34
RTL9Q8NET4 Z82202.1-201ENST00000623446 1880 ntBASIC23.45■■□□□ 1.34
RTL9Q8NET4 KCNC2-204ENST00000540018 2168 ntAPPRIS ALT2 TSL 2 BASIC23.45■■□□□ 1.34
RTL9Q8NET4 SPATS2L-204ENST00000409140 2463 ntAPPRIS P1 TSL 2 BASIC23.45■■□□□ 1.34
RTL9Q8NET4 RPS6KB1-204ENST00000443572 1913 ntTSL 2 BASIC23.45■■□□□ 1.34
RTL9Q8NET4 IRF7-201ENST00000330243 1992 ntAPPRIS P4 TSL 5 BASIC23.45■■□□□ 1.34
RTL9Q8NET4 KDM3B-201ENST00000314358 6813 ntAPPRIS P1 TSL 1 (best) BASIC23.45■■□□□ 1.34
RTL9Q8NET4 HSD17B1-202ENST00000585807 4982 ntAPPRIS P3 TSL 1 (best) BASIC23.45■■□□□ 1.34
RTL9Q8NET4 HAND2-AS1-237ENST00000616485 2420 ntTSL 2 BASIC23.45■■□□□ 1.34
RTL9Q8NET4 NR1H2-202ENST00000411902 1466 ntTSL 1 (best) BASIC23.45■■□□□ 1.34
RTL9Q8NET4 STARD4-203ENST00000502322 1467 ntTSL 1 (best) BASIC23.45■■□□□ 1.34
RTL9Q8NET4 HLA-G-205ENST00000428701 1578 ntAPPRIS P2 BASIC23.44■■□□□ 1.34
RTL9Q8NET4 ISOC2-203ENST00000438389 1566 ntTSL 2 BASIC23.44■■□□□ 1.34
RTL9Q8NET4 FAM120A-201ENST00000277165 5118 ntAPPRIS P1 TSL 1 (best) BASIC23.44■■□□□ 1.34
RTL9Q8NET4 ISCU-201ENST00000311893 994 ntAPPRIS P1 TSL 1 (best) BASIC23.44■■□□□ 1.34
RTL9Q8NET4 MUC1-204ENST00000343256 648 ntTSL 1 (best) BASIC23.44■■□□□ 1.34
RTL9Q8NET4 IPPK-202ENST00000375522 882 ntTSL 3 BASIC23.44■■□□□ 1.34
RTL9Q8NET4 TPM4P1-201ENST00000436100 807 ntBASIC23.44■■□□□ 1.34
RTL9Q8NET4 AL162457.2-201ENST00000447909 937 ntTSL 3 BASIC23.44■■□□□ 1.34
RTL9Q8NET4 AC011773.3-202ENST00000549291 790 ntTSL 3 BASIC23.44■■□□□ 1.34
RTL9Q8NET4 ZNF444P1-201ENST00000559497 298 ntBASIC23.44■■□□□ 1.34
RTL9Q8NET4 SETD3-209ENST00000630307 1281 ntTSL 5 BASIC23.44■■□□□ 1.34
RTL9Q8NET4 IRF5-202ENST00000357234 1680 ntTSL 1 (best) BASIC23.44■■□□□ 1.34
RTL9Q8NET4 DBNL-217ENST00000468694 2068 ntAPPRIS ALT2 TSL 2 BASIC23.44■■□□□ 1.34
RTL9Q8NET4 KCTD1-202ENST00000408011 2103 ntAPPRIS P1 TSL 1 (best) BASIC23.44■■□□□ 1.34
RTL9Q8NET4 CLK3-202ENST00000395066 2621 ntTSL 1 (best) BASIC23.44■■□□□ 1.34
RTL9Q8NET4 MTMR9LP-204ENST00000441044 2624 ntTSL 1 (best) BASIC23.44■■□□□ 1.34
RTL9Q8NET4 PUF60-202ENST00000349157 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC23.44■■□□□ 1.34
RTL9Q8NET4 PTGER3-202ENST00000351052 1404 ntAPPRIS ALT2 TSL 5 BASIC23.44■■□□□ 1.34
RTL9Q8NET4 ING1-201ENST00000333219 5119 ntAPPRIS P1 TSL 1 (best) BASIC23.44■■□□□ 1.34
RTL9Q8NET4 AL035252.2-201ENST00000454676 3168 ntTSL 2 BASIC23.44■■□□□ 1.34
RTL9Q8NET4 MRFAP1-201ENST00000320912 2049 ntAPPRIS P1 TSL 2 BASIC23.44■■□□□ 1.34
RTL9Q8NET4 ESR2-204ENST00000353772 2454 ntTSL 1 (best) BASIC23.44■■□□□ 1.34
RTL9Q8NET4 AOC1-202ENST00000416793 2453 ntTSL 1 (best) BASIC23.44■■□□□ 1.34
RTL9Q8NET4 FARSA-207ENST00000588025 2057 ntTSL 5 BASIC23.43■■□□□ 1.34
RTL9Q8NET4 TEAD2-210ENST00000601519 2167 ntAPPRIS ALT1 TSL 1 (best) BASIC23.43■■□□□ 1.34
RTL9Q8NET4 CDC14B-208ENST00000463569 1734 ntAPPRIS ALT2 TSL 5 BASIC23.43■■□□□ 1.34
RTL9Q8NET4 CXCL16-201ENST00000293778 2222 ntAPPRIS P2 TSL 1 (best) BASIC23.43■■□□□ 1.34
RTL9Q8NET4 RDX-202ENST00000405097 2761 ntTSL 1 (best) BASIC23.43■■□□□ 1.34
RTL9Q8NET4 IGLL1-201ENST00000249053 716 ntTSL 1 (best) BASIC23.43■■□□□ 1.34
RTL9Q8NET4 KCNMB3-202ENST00000349697 1228 ntAPPRIS P1 TSL 5 BASIC23.43■■□□□ 1.34
RTL9Q8NET4 MRPL24-202ENST00000368211 883 ntAPPRIS P1 TSL 1 (best) BASIC23.43■■□□□ 1.34
RTL9Q8NET4 CHCHD3-203ENST00000448878 1038 ntTSL 5 BASIC23.43■■□□□ 1.34
RTL9Q8NET4 DGUOK-AS1-203ENST00000453103 601 ntTSL 3 BASIC23.43■■□□□ 1.34
RTL9Q8NET4 C12orf43-206ENST00000537817 1270 ntAPPRIS ALT2 TSL 1 (best) BASIC23.43■■□□□ 1.34
RTL9Q8NET4 NUDT16L1-201ENST00000304301 1349 ntAPPRIS P1 TSL 1 (best) BASIC23.43■■□□□ 1.34
RTL9Q8NET4 RDH13-203ENST00000415061 1871 ntAPPRIS P1 TSL 1 (best) BASIC23.43■■□□□ 1.34
RTL9Q8NET4 INTS11-250ENST00000620829 1862 ntTSL 2 BASIC23.43■■□□□ 1.34
RTL9Q8NET4 ACTR5-201ENST00000243903 2565 ntAPPRIS P1 TSL 1 (best) BASIC23.43■■□□□ 1.34
RTL9Q8NET4 ULK3-217ENST00000568667 1470 ntTSL 5 BASIC23.43■■□□□ 1.34
RTL9Q8NET4 POMGNT1-201ENST00000371984 2728 ntAPPRIS P1 TSL 1 (best) BASIC23.43■■□□□ 1.34
RTL9Q8NET4 YPEL3-202ENST00000398841 1588 ntTSL 1 (best) BASIC23.43■■□□□ 1.34
RTL9Q8NET4 TMPRSS6-207ENST00000442782 1695 ntTSL 1 (best) BASIC23.43■■□□□ 1.34
RTL9Q8NET4 COCH-201ENST00000216361 2397 ntAPPRIS P1 TSL 1 (best) BASIC23.43■■□□□ 1.34
RTL9Q8NET4 DNAJC8-201ENST00000263697 1759 ntAPPRIS P1 TSL 1 (best) BASIC23.43■■□□□ 1.34
RTL9Q8NET4 PDE9A-213ENST00000398236 1776 ntTSL 1 (best) BASIC23.43■■□□□ 1.34
RTL9Q8NET4 NDOR1-204ENST00000458322 1829 ntTSL 1 (best) BASIC23.43■■□□□ 1.34
RTL9Q8NET4 JADE2-204ENST00000402835 2797 ntTSL 5 BASIC23.42■■□□□ 1.34
RTL9Q8NET4 MIXL1-201ENST00000366810 2005 ntAPPRIS P1 TSL 1 (best) BASIC23.42■■□□□ 1.34
RTL9Q8NET4 SWI5-201ENST00000320188 980 ntAPPRIS P3 TSL 1 (best) BASIC23.42■■□□□ 1.34
RTL9Q8NET4 NMRK1-202ENST00000376808 1121 ntTSL 1 (best) BASIC23.42■■□□□ 1.34
RTL9Q8NET4 MADCAM1-203ENST00000382683 603 ntTSL 1 (best) BASIC23.42■■□□□ 1.34
RTL9Q8NET4 AL161452.1-201ENST00000415062 1117 ntTSL 1 (best) BASIC23.42■■□□□ 1.34
RTL9Q8NET4 HCG4P8-203ENST00000443049 980 ntBASIC23.42■■□□□ 1.34
RTL9Q8NET4 MCCD1P1-208ENST00000445732 328 ntBASIC23.42■■□□□ 1.34
RTL9Q8NET4 PDZD7-203ENST00000470414 1057 ntTSL 2 BASIC23.42■■□□□ 1.34
RTL9Q8NET4 FIS1-207ENST00000474120 915 ntTSL 1 (best) BASIC23.42■■□□□ 1.34
RTL9Q8NET4 NEK7-207ENST00000538004 1036 ntAPPRIS P1 TSL 1 (best) BASIC23.42■■□□□ 1.34
RTL9Q8NET4 MMAB-204ENST00000537236 1342 ntTSL 3 BASIC23.42■■□□□ 1.34
RTL9Q8NET4 PRMT5-201ENST00000216350 2271 ntTSL 2 BASIC23.42■■□□□ 1.34
RTL9Q8NET4 KCNK4-205ENST00000538767 1389 ntTSL 2 BASIC23.42■■□□□ 1.34
RTL9Q8NET4 RPS6KL1-216ENST00000557413 2425 ntAPPRIS P1 TSL 5 BASIC23.42■■□□□ 1.34
RTL9Q8NET4 OBSL1-214ENST00000603926 5520 ntTSL 5 BASIC23.42■■□□□ 1.34
Retrieved 100 of 98,524 protein–RNA pairs in 22.5 ms