Protein–RNA interactions for Protein: Q8IX18

DHX40, Probable ATP-dependent RNA helicase DHX40, humanhuman

Known RBP Predictions only

Length 779 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DHX40Q8IX18 FBXL15-201ENST00000224862 2362 ntAPPRIS P2 TSL 1 (best) BASIC21.17■□□□□ 0.98
DHX40Q8IX18 SBNO2-201ENST00000361757 4923 ntAPPRIS P4 TSL 1 (best) BASIC21.17■□□□□ 0.98
DHX40Q8IX18 TMEM263-204ENST00000548125 3349 ntAPPRIS P1 TSL 2 BASIC21.16■□□□□ 0.98
DHX40Q8IX18 TJP3-205ENST00000587686 2946 ntAPPRIS ALT2 TSL 1 (best) BASIC21.16■□□□□ 0.98
DHX40Q8IX18 PXK-206ENST00000463280 2825 ntTSL 2 BASIC21.16■□□□□ 0.98
DHX40Q8IX18 CD276-203ENST00000537340 2439 ntTSL 2 BASIC21.16■□□□□ 0.98
DHX40Q8IX18 ZDHHC8P1-204ENST00000433168 2309 ntTSL 2 BASIC21.16■□□□□ 0.98
DHX40Q8IX18 PDZD3-202ENST00000355547 2252 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
DHX40Q8IX18 SEC11C-202ENST00000509791 2054 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
DHX40Q8IX18 AC127496.1-202ENST00000573602 2091 ntTSL 2 BASIC21.16■□□□□ 0.98
DHX40Q8IX18 HOOK1-201ENST00000371208 5857 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
DHX40Q8IX18 C12orf65-202ENST00000366329 1901 ntAPPRIS P2 TSL 2 BASIC21.16■□□□□ 0.98
DHX40Q8IX18 AC073592.3-201ENST00000625118 1834 ntBASIC21.16■□□□□ 0.98
DHX40Q8IX18 TSR1-201ENST00000301364 5188 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
DHX40Q8IX18 FBXL12-205ENST00000586651 1736 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
DHX40Q8IX18 TIMP4-201ENST00000287814 1650 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
DHX40Q8IX18 MATN4-201ENST00000353917 1657 ntTSL 5 BASIC21.16■□□□□ 0.98
DHX40Q8IX18 KCNK4-201ENST00000394525 1673 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
DHX40Q8IX18 MFSD1-201ENST00000264266 1594 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
DHX40Q8IX18 KXD1-203ENST00000540691 1592 ntAPPRIS P1 TSL 3 BASIC21.16■□□□□ 0.98
DHX40Q8IX18 CAMKMT-201ENST00000378494 1495 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
DHX40Q8IX18 FEZF1-202ENST00000427185 1368 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
DHX40Q8IX18 AC012146.1-202ENST00000413077 474 ntTSL 2 BASIC21.16■□□□□ 0.98
DHX40Q8IX18 AC069152.1-201ENST00000438030 544 ntBASIC21.16■□□□□ 0.98
DHX40Q8IX18 TNNI3-207ENST00000588882 669 ntTSL 2 BASIC21.16■□□□□ 0.98
DHX40Q8IX18 TRAPPC5-203ENST00000595985 411 ntTSL 3 BASIC21.16■□□□□ 0.98
DHX40Q8IX18 KDM4B-202ENST00000381759 3058 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
DHX40Q8IX18 KDM1A-202ENST00000400181 3059 ntAPPRIS ALT2 TSL 1 (best) BASIC21.16■□□□□ 0.98
DHX40Q8IX18 UBE2QL1-201ENST00000399816 4317 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
DHX40Q8IX18 PNPO-201ENST00000225573 2256 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
DHX40Q8IX18 POLD3-203ENST00000527458 2122 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
DHX40Q8IX18 JAKMIP1-202ENST00000409021 2975 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
DHX40Q8IX18 SF1-203ENST00000377387 2947 ntAPPRIS ALT2 TSL 1 (best) BASIC21.15■□□□□ 0.98
DHX40Q8IX18 SBDS-201ENST00000246868 1631 ntAPPRIS P2 TSL 1 (best) BASIC21.15■□□□□ 0.98
DHX40Q8IX18 PPP1R7-201ENST00000234038 2386 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
DHX40Q8IX18 SMARCC2-201ENST00000267064 4076 ntAPPRIS P4 TSL 1 (best) BASIC21.15■□□□□ 0.98
DHX40Q8IX18 NDUFB1-201ENST00000329559 528 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
DHX40Q8IX18 HSD17B10-202ENST00000375298 823 ntTSL 3 BASIC21.15■□□□□ 0.98
DHX40Q8IX18 CSF1-205ENST00000420111 1083 ntTSL 5 BASIC21.15■□□□□ 0.98
DHX40Q8IX18 KCNC4-204ENST00000438661 2953 ntAPPRIS ALT2 TSL 1 (best) BASIC21.15■□□□□ 0.98
DHX40Q8IX18 AL691442.1-201ENST00000505139 1042 ntAPPRIS P1 TSL 2 BASIC21.15■□□□□ 0.98
DHX40Q8IX18 AC099522.1-201ENST00000505955 881 ntTSL 3 BASIC21.15■□□□□ 0.98
DHX40Q8IX18 XYLT2-203ENST00000507602 2107 ntTSL 2 BASIC21.15■□□□□ 0.98
DHX40Q8IX18 OCIAD2-205ENST00000508632 1163 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
DHX40Q8IX18 AL929601.1-201ENST00000551565 573 ntTSL 4 BASIC21.15■□□□□ 0.98
DHX40Q8IX18 RGMA-211ENST00000557420 989 ntTSL 3 BASIC21.15■□□□□ 0.98
DHX40Q8IX18 AC009065.4-203ENST00000562838 535 ntTSL 2 BASIC21.15■□□□□ 0.98
DHX40Q8IX18 FAM219B-212ENST00000565772 1249 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
DHX40Q8IX18 DCAKD-205ENST00000588499 990 ntAPPRIS P1 TSL 2 BASIC21.15■□□□□ 0.98
DHX40Q8IX18 PSMC3IP-208ENST00000590760 664 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
DHX40Q8IX18 SNAI3-AS1-205ENST00000568633 2096 ntBASIC21.15■□□□□ 0.98
DHX40Q8IX18 CNNM1-201ENST00000356713 5959 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
DHX40Q8IX18 HARBI1-201ENST00000326737 1967 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
DHX40Q8IX18 GOLGA6L5P-202ENST00000515341 1828 ntBASIC21.15■□□□□ 0.98
DHX40Q8IX18 TMEM74-201ENST00000297459 1741 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
DHX40Q8IX18 KRT13-202ENST00000336861 1673 ntAPPRIS ALT2 TSL 1 (best) BASIC21.15■□□□□ 0.98
DHX40Q8IX18 EPHA10-202ENST00000373048 5425 ntAPPRIS P2 TSL 5 BASIC21.15■□□□□ 0.98
DHX40Q8IX18 IL6R-208ENST00000622330 1496 ntAPPRIS ALT2 TSL 1 (best) BASIC21.14■□□□□ 0.98
DHX40Q8IX18 PDLIM3-201ENST00000284767 2589 ntTSL 5 BASIC21.14■□□□□ 0.98
DHX40Q8IX18 GNE-201ENST00000377902 2565 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.98
DHX40Q8IX18 BAIAP2-203ENST00000416299 1442 ntTSL 2 BASIC21.14■□□□□ 0.98
DHX40Q8IX18 NR2F1-205ENST00000615873 1427 ntTSL 1 (best) BASIC21.14■□□□□ 0.98
DHX40Q8IX18 ACADS-201ENST00000242592 1950 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.98
DHX40Q8IX18 GBGT1-203ENST00000372040 1980 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.98
DHX40Q8IX18 BICRA-204ENST00000614245 5697 ntAPPRIS ALT2 TSL 5 BASIC21.14■□□□□ 0.97
DHX40Q8IX18 RBM42-204ENST00000589559 1328 ntTSL 5 BASIC21.14■□□□□ 0.97
DHX40Q8IX18 VMO1-201ENST00000328739 766 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
DHX40Q8IX18 TUBB8P6-201ENST00000436895 1288 ntBASIC21.14■□□□□ 0.97
DHX40Q8IX18 DNAJA4-210ENST00000489435 947 ntTSL 3 BASIC21.14■□□□□ 0.97
DHX40Q8IX18 CD99P1-205ENST00000527459 561 ntBASIC21.14■□□□□ 0.97
DHX40Q8IX18 CKLF-CMTM1-204ENST00000532838 587 ntAPPRIS ALT2 TSL 4 BASIC21.14■□□□□ 0.97
DHX40Q8IX18 AC133041.1-202ENST00000642053 222 ntBASIC21.14■□□□□ 0.97
DHX40Q8IX18 PTTG1IP-201ENST00000330938 2760 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
DHX40Q8IX18 FGF2-201ENST00000264498 6775 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
DHX40Q8IX18 CDK13-202ENST00000340829 5066 ntAPPRIS ALT1 TSL 1 (best) BASIC21.14■□□□□ 0.97
DHX40Q8IX18 CPZ-201ENST00000315782 2136 ntAPPRIS P3 TSL 1 (best) BASIC21.14■□□□□ 0.97
DHX40Q8IX18 ZCWPW1-201ENST00000360951 2110 ntAPPRIS ALT2 TSL 2 BASIC21.14■□□□□ 0.97
DHX40Q8IX18 AJUBA-202ENST00000361265 2569 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
DHX40Q8IX18 IL15-201ENST00000296545 2472 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
DHX40Q8IX18 ITPKB-203ENST00000429204 6162 ntAPPRIS P1 TSL 5 BASIC21.14■□□□□ 0.97
DHX40Q8IX18 ZNF74-202ENST00000400451 3159 ntAPPRIS P2 TSL 1 (best) BASIC21.13■□□□□ 0.97
DHX40Q8IX18 KXD1-202ENST00000539106 1496 ntAPPRIS P1 TSL 3 BASIC21.13■□□□□ 0.97
DHX40Q8IX18 GLS-201ENST00000320717 4834 ntAPPRIS P3 TSL 1 (best) BASIC21.13■□□□□ 0.97
DHX40Q8IX18 NTRK1-203ENST00000392302 2609 ntTSL 5 BASIC21.13■□□□□ 0.97
DHX40Q8IX18 SMPD1-203ENST00000527275 2188 ntAPPRIS P3 TSL 2 BASIC21.13■□□□□ 0.97
DHX40Q8IX18 TTC22-201ENST00000371274 2149 ntTSL 2 BASIC21.13■□□□□ 0.97
DHX40Q8IX18 RMND5A-201ENST00000283632 6301 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
DHX40Q8IX18 MT3-201ENST00000200691 569 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
DHX40Q8IX18 HAGLROS-201ENST00000426615 1121 ntTSL 2 BASIC21.13■□□□□ 0.97
DHX40Q8IX18 SLC29A4P2-201ENST00000504749 1089 ntBASIC21.13■□□□□ 0.97
DHX40Q8IX18 LEF1-AS1-203ENST00000507799 459 ntTSL 3 BASIC21.13■□□□□ 0.97
DHX40Q8IX18 AC091874.3-201ENST00000512672 1195 ntBASIC21.13■□□□□ 0.97
DHX40Q8IX18 AC092143.2-201ENST00000554623 985 ntTSL 3 BASIC21.13■□□□□ 0.97
DHX40Q8IX18 MAGIX-202ENST00000595224 1238 ntAPPRIS P2 TSL 5 BASIC21.13■□□□□ 0.97
DHX40Q8IX18 SLC35A3-218ENST00000639994 1114 ntTSL 5 BASIC21.13■□□□□ 0.97
DHX40Q8IX18 NETO1-201ENST00000327305 3058 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
DHX40Q8IX18 ADGRG2-210ENST00000379878 4803 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
DHX40Q8IX18 BOD1L2-201ENST00000585477 3239 ntAPPRIS P1 BASIC21.13■□□□□ 0.97
DHX40Q8IX18 C8orf58-207ENST00000615223 1848 ntAPPRIS ALT2 TSL 5 BASIC21.13■□□□□ 0.97
DHX40Q8IX18 GAS2L1P1-201ENST00000420145 1480 ntBASIC21.13■□□□□ 0.97
Retrieved 100 of 98,524 protein–RNA pairs in 31.1 ms