Protein–RNA interactions for Protein: Q52M75

LINC01554, Putative uncharacterized protein encoded by LINC01554, humanhuman

Predictions only

Length 96 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01554Q52M75 C1orf56-201ENST00000368926 2096 ntAPPRIS P1 TSL 1 (best) BASIC9.57□□□□□ -0.88
LINC01554Q52M75 CCT6A-201ENST00000275603 2719 ntAPPRIS P1 TSL 1 (best) BASIC9.57□□□□□ -0.88
LINC01554Q52M75 TMEM121-202ENST00000431372 1519 ntAPPRIS P1 TSL 5 BASIC9.57□□□□□ -0.88
LINC01554Q52M75 NRBP1-203ENST00000379852 2163 ntAPPRIS P1 TSL 1 (best) BASIC9.57□□□□□ -0.88
LINC01554Q52M75 INPPL1-207ENST00000538751 4656 ntTSL 1 (best) BASIC9.57□□□□□ -0.88
LINC01554Q52M75 PAQR4-203ENST00000572687 2251 ntTSL 2 BASIC9.57□□□□□ -0.88
LINC01554Q52M75 PRR29-AS1-202ENST00000580942 2926 ntTSL 2 BASIC9.57□□□□□ -0.88
LINC01554Q52M75 AGTR1-209ENST00000497524 2359 ntAPPRIS P1 TSL 1 (best) BASIC9.57□□□□□ -0.88
LINC01554Q52M75 TAF5L-201ENST00000258281 3112 ntAPPRIS P1 TSL 5 BASIC9.57□□□□□ -0.88
LINC01554Q52M75 ANKRD13B-209ENST00000614878 2670 ntAPPRIS P1 TSL 5 BASIC9.57□□□□□ -0.88
LINC01554Q52M75 BRICD5-201ENST00000328540 1913 ntAPPRIS P1 TSL 1 (best) BASIC9.57□□□□□ -0.88
LINC01554Q52M75 SAMD4A-202ENST00000392067 6833 ntAPPRIS P1 TSL 2 BASIC9.57□□□□□ -0.88
LINC01554Q52M75 COLGALT1-201ENST00000252599 3704 ntAPPRIS P2 TSL 1 (best) BASIC9.57□□□□□ -0.88
LINC01554Q52M75 LSM4-201ENST00000252816 986 ntTSL 2 BASIC9.57□□□□□ -0.88
LINC01554Q52M75 MRPS34-202ENST00000397375 1024 ntAPPRIS P1 TSL 1 (best) BASIC9.57□□□□□ -0.88
LINC01554Q52M75 AC006455.2-201ENST00000429931 906 ntBASIC9.57□□□□□ -0.88
LINC01554Q52M75 KRT16P3-201ENST00000439127 1283 ntBASIC9.57□□□□□ -0.88
LINC01554Q52M75 RBM38-205ENST00000440234 686 ntTSL 2 BASIC9.57□□□□□ -0.88
LINC01554Q52M75 LINC00926-202ENST00000502027 2141 ntTSL 2 BASIC9.57□□□□□ -0.88
LINC01554Q52M75 KRAS-204ENST00000557334 1052 ntTSL 5 BASIC9.57□□□□□ -0.88
LINC01554Q52M75 AC099791.2-201ENST00000605725 427 ntBASIC9.57□□□□□ -0.88
LINC01554Q52M75 SLC35A3-216ENST00000639221 1032 ntTSL 5 BASIC9.57□□□□□ -0.88
LINC01554Q52M75 PLEKHF1-204ENST00000592810 1357 ntAPPRIS P1 TSL 1 (best) BASIC9.57□□□□□ -0.88
LINC01554Q52M75 DDHD2-205ENST00000520272 4532 ntAPPRIS P1 TSL 2 BASIC9.57□□□□□ -0.88
LINC01554Q52M75 GMPPB-202ENST00000308388 1582 ntAPPRIS P1 TSL 1 (best) BASIC9.57□□□□□ -0.88
LINC01554Q52M75 HNRNPAB-208ENST00000515193 1595 ntAPPRIS ALT2 TSL 5 BASIC9.57□□□□□ -0.88
LINC01554Q52M75 MINDY2-203ENST00000559228 9238 ntAPPRIS P3 TSL 2 BASIC9.57□□□□□ -0.88
LINC01554Q52M75 CARHSP1-220ENST00000619881 2849 ntAPPRIS P1 TSL 3 BASIC9.57□□□□□ -0.88
LINC01554Q52M75 C9orf66-201ENST00000382387 2918 ntAPPRIS P1 BASIC9.57□□□□□ -0.88
LINC01554Q52M75 AC005920.1-201ENST00000501718 2054 ntTSL 2 BASIC9.57□□□□□ -0.88
LINC01554Q52M75 AC127496.1-202ENST00000573602 2091 ntTSL 2 BASIC9.57□□□□□ -0.88
LINC01554Q52M75 ST3GAL5-202ENST00000377332 2165 ntTSL 5 BASIC9.57□□□□□ -0.88
LINC01554Q52M75 SMTNL2-202ENST00000389313 2280 ntAPPRIS P1 TSL 1 (best) BASIC9.57□□□□□ -0.88
LINC01554Q52M75 TMED3-203ENST00000536821 2265 ntTSL 2 BASIC9.57□□□□□ -0.88
LINC01554Q52M75 HIPK3-202ENST00000379016 7345 ntAPPRIS P1 TSL 1 (best) BASIC9.57□□□□□ -0.88
LINC01554Q52M75 GTF2IRD1-205ENST00000476977 5868 ntTSL 1 (best) BASIC9.57□□□□□ -0.88
LINC01554Q52M75 FAM210A-202ENST00000402563 4240 ntAPPRIS P1 TSL 3 BASIC9.57□□□□□ -0.88
LINC01554Q52M75 GTPBP3-201ENST00000324894 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC9.57□□□□□ -0.88
LINC01554Q52M75 DIABLO-208ENST00000464942 2569 ntTSL 1 (best) BASIC9.57□□□□□ -0.88
LINC01554Q52M75 ATP5F1-202ENST00000369722 3156 ntAPPRIS P1 TSL 1 (best) BASIC9.57□□□□□ -0.88
LINC01554Q52M75 LRFN2-201ENST00000338305 3270 ntAPPRIS P1 TSL 1 (best) BASIC9.57□□□□□ -0.88
LINC01554Q52M75 GLRX3-201ENST00000331244 1302 ntAPPRIS P1 TSL 1 (best) BASIC9.56□□□□□ -0.88
LINC01554Q52M75 AP2A2-201ENST00000332231 4656 ntAPPRIS ALT1 TSL 1 (best) BASIC9.56□□□□□ -0.88
LINC01554Q52M75 DECR2-201ENST00000219481 1615 ntAPPRIS P1 TSL 1 (best) BASIC9.56□□□□□ -0.88
LINC01554Q52M75 MYCBPAP-202ENST00000419930 1640 ntAPPRIS ALT2 TSL 1 (best) BASIC9.56□□□□□ -0.88
LINC01554Q52M75 B4GALNT1-203ENST00000449184 1633 ntTSL 2 BASIC9.56□□□□□ -0.88
LINC01554Q52M75 YBX3-202ENST00000279550 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC9.56□□□□□ -0.88
LINC01554Q52M75 MFF-203ENST00000349901 1716 ntTSL 2 BASIC9.56□□□□□ -0.88
LINC01554Q52M75 PRR16-202ENST00000407149 1747 ntAPPRIS P1 TSL 1 (best) BASIC9.56□□□□□ -0.88
LINC01554Q52M75 ZFP30-201ENST00000351218 6090 ntAPPRIS P1 TSL 1 (best) BASIC9.56□□□□□ -0.88
LINC01554Q52M75 LRRC42-203ENST00000371370 2037 ntAPPRIS P1 TSL 2 BASIC9.56□□□□□ -0.88
LINC01554Q52M75 CMTM3-202ENST00000424011 2330 ntAPPRIS P1 TSL 2 BASIC9.56□□□□□ -0.88
LINC01554Q52M75 SAMD11-212ENST00000617307 2314 ntAPPRIS ALT2 TSL 5 BASIC9.56□□□□□ -0.88
LINC01554Q52M75 GPAT3-208ENST00000611707 2633 ntAPPRIS P1 TSL 5 BASIC9.56□□□□□ -0.88
LINC01554Q52M75 SACM1L-201ENST00000389061 3723 ntAPPRIS P1 TSL 1 (best) BASIC9.56□□□□□ -0.88
LINC01554Q52M75 PPP1R26-205ENST00000605286 4744 ntAPPRIS P1 TSL 3 BASIC9.56□□□□□ -0.88
LINC01554Q52M75 MARK4-202ENST00000300843 5209 ntTSL 1 (best) BASIC9.56□□□□□ -0.88
LINC01554Q52M75 SEMA4F-210ENST00000611975 6007 ntTSL 5 BASIC9.56□□□□□ -0.88
LINC01554Q52M75 OR2C3-201ENST00000366487 8467 ntAPPRIS P1 BASIC9.56□□□□□ -0.88
LINC01554Q52M75 HNRNPU-226ENST00000640218 6858 ntAPPRIS ALT2 TSL 1 (best) BASIC9.56□□□□□ -0.88
LINC01554Q52M75 VAC14-201ENST00000261776 3099 ntAPPRIS P1 TSL 1 (best) BASIC9.56□□□□□ -0.88
LINC01554Q52M75 ADRB3-201ENST00000345060 2950 ntAPPRIS P1 TSL 1 (best) BASIC9.56□□□□□ -0.88
LINC01554Q52M75 RPH3AL-222ENST00000618002 2578 ntAPPRIS P2 TSL 5 BASIC9.56□□□□□ -0.88
LINC01554Q52M75 CUX2-201ENST00000261726 6844 ntAPPRIS P1 TSL 1 (best) BASIC9.56□□□□□ -0.88
LINC01554Q52M75 DTX2-212ENST00000446820 1770 ntAPPRIS ALT2 TSL 1 (best) BASIC9.56□□□□□ -0.88
LINC01554Q52M75 MFSD7-209ENST00000515118 1556 ntTSL 5 BASIC9.56□□□□□ -0.88
LINC01554Q52M75 SYNGR2-203ENST00000588282 1553 ntTSL 1 (best) BASIC9.56□□□□□ -0.88
LINC01554Q52M75 ST3GAL4-213ENST00000530591 1459 ntAPPRIS P3 TSL 1 (best) BASIC9.56□□□□□ -0.88
LINC01554Q52M75 MAGI3-204ENST00000369617 3911 ntTSL 1 (best) BASIC9.56□□□□□ -0.88
LINC01554Q52M75 RPL31-208ENST00000409733 825 ntAPPRIS P3 TSL 1 (best) BASIC9.56□□□□□ -0.88
LINC01554Q52M75 IPO9-AS1-201ENST00000413035 839 ntTSL 3 BASIC9.56□□□□□ -0.88
LINC01554Q52M75 DPP10-AS1-201ENST00000432658 730 ntTSL 1 (best) BASIC9.56□□□□□ -0.88
LINC01554Q52M75 C14orf80-211ENST00000450383 1107 ntAPPRIS ALT2 TSL 5 BASIC9.56□□□□□ -0.88
LINC01554Q52M75 AC004540.2-202ENST00000451264 508 ntTSL 2 BASIC9.56□□□□□ -0.88
LINC01554Q52M75 RARRES2P1-201ENST00000474487 481 ntBASIC9.56□□□□□ -0.88
LINC01554Q52M75 AC092343.1-201ENST00000500224 729 ntTSL 3 BASIC9.56□□□□□ -0.88
LINC01554Q52M75 AL499627.2-201ENST00000606283 725 ntBASIC9.56□□□□□ -0.88
LINC01554Q52M75 SCUBE1-208ENST00000615096 1119 ntTSL 2 BASIC9.56□□□□□ -0.88
LINC01554Q52M75 MIR6724-1-201ENST00000616420 92 ntBASIC9.56□□□□□ -0.88
LINC01554Q52M75 MIR6724-2-201ENST00000616483 92 ntBASIC9.56□□□□□ -0.88
LINC01554Q52M75 MIR6724-4-201ENST00000617390 92 ntBASIC9.56□□□□□ -0.88
LINC01554Q52M75 GPX4-213ENST00000622390 1002 ntTSL 5 BASIC9.56□□□□□ -0.88
LINC01554Q52M75 MIR6724-3-201ENST00000622482 92 ntBASIC9.56□□□□□ -0.88
LINC01554Q52M75 GRB2-203ENST00000392562 3729 ntAPPRIS P1 TSL 2 BASIC9.56□□□□□ -0.88
LINC01554Q52M75 LRCH1-202ENST00000389797 3314 ntAPPRIS ALT2 TSL 1 (best) BASIC9.56□□□□□ -0.88
LINC01554Q52M75 TRPC4AP-202ENST00000451813 3138 ntTSL 2 BASIC9.56□□□□□ -0.88
LINC01554Q52M75 LSP1-204ENST00000406638 2640 ntAPPRIS ALT2 TSL 2 BASIC9.56□□□□□ -0.88
LINC01554Q52M75 DCTN1-203ENST00000409240 4365 ntAPPRIS ALT2 TSL 1 (best) BASIC9.56□□□□□ -0.88
LINC01554Q52M75 SYTL3-202ENST00000360448 2504 ntAPPRIS ALT1 TSL 5 BASIC9.56□□□□□ -0.88
LINC01554Q52M75 KLC1-217ENST00000554280 2426 ntTSL 5 BASIC9.56□□□□□ -0.88
LINC01554Q52M75 WWC2-201ENST00000403733 8826 ntAPPRIS P1 TSL 5 BASIC9.56□□□□□ -0.88
LINC01554Q52M75 PIGQ-204ENST00000409527 1915 ntAPPRIS P1 TSL 2 BASIC9.56□□□□□ -0.88
LINC01554Q52M75 AC104581.4-201ENST00000623126 3052 ntBASIC9.56□□□□□ -0.88
LINC01554Q52M75 AL353803.2-201ENST00000436510 1846 ntTSL 5 BASIC9.56□□□□□ -0.88
LINC01554Q52M75 HSPH1-201ENST00000320027 5191 ntAPPRIS P1 TSL 1 (best) BASIC9.56□□□□□ -0.88
LINC01554Q52M75 HTATIP2-204ENST00000451739 1748 ntAPPRIS P1 TSL 1 (best) BASIC9.56□□□□□ -0.88
LINC01554Q52M75 SMPD2-201ENST00000258052 1645 ntAPPRIS P1 TSL 1 (best) BASIC9.56□□□□□ -0.88
LINC01554Q52M75 MAP1LC3B-201ENST00000268607 2688 ntAPPRIS P1 TSL 1 (best) BASIC9.56□□□□□ -0.88
LINC01554Q52M75 SHTN1-201ENST00000260777 5308 ntAPPRIS ALT2 TSL 2 BASIC9.56□□□□□ -0.88
LINC01554Q52M75 THOC6-202ENST00000326266 1419 ntAPPRIS P1 TSL 1 (best) BASIC9.56□□□□□ -0.88
Retrieved 100 of 98,524 protein–RNA pairs in 25.1 ms