Protein–RNA interactions for Protein: P49427

CDC34, Ubiquitin-conjugating enzyme E2 R1, humanhuman

Predicted RBP Predictions only

Length 236 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDC34P49427 ETHE1-205ENST00000600651 1052 ntTSL 1 (best) BASIC15.05■□□□□ -0
CDC34P49427 UBE2DNL-204ENST00000602536 740 ntBASIC15.05■□□□□ -0
CDC34P49427 AL031432.3-201ENST00000607698 485 ntBASIC15.05■□□□□ -0
CDC34P49427 AC004528.2-201ENST00000610701 440 ntTSL 5 BASIC15.05■□□□□ -0
CDC34P49427 MMP28-203ENST00000612672 1092 ntTSL 1 (best) BASIC15.05■□□□□ -0
CDC34P49427 MYCNOS-205ENST00000641950 531 ntBASIC15.05■□□□□ -0
CDC34P49427 GLI4-201ENST00000340042 1341 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
CDC34P49427 MARC2-201ENST00000359316 1335 ntTSL 1 (best) BASIC15.05■□□□□ -0
CDC34P49427 SAC3D1-205ENST00000531072 1362 ntAPPRIS P1 TSL 2 BASIC15.05■□□□□ -0
CDC34P49427 C17orf58-201ENST00000334461 1535 ntTSL 2 BASIC15.05■□□□□ -0
CDC34P49427 ETV4-204ENST00000545089 1628 ntTSL 2 BASIC15.05■□□□□ -0
CDC34P49427 PHRF1-202ENST00000413872 5224 ntAPPRIS ALT2 TSL 1 (best) BASIC15.05■□□□□ -0
CDC34P49427 SERPINA4-201ENST00000298841 1784 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
CDC34P49427 FO681492.1-201ENST00000623662 5321 ntAPPRIS P5 TSL 2 BASIC15.05■□□□□ -0
CDC34P49427 FN3KRP-201ENST00000269373 1849 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
CDC34P49427 HEXDC-203ENST00000577944 1820 ntTSL 5 BASIC15.05■□□□□ -0
CDC34P49427 SLC3A2-202ENST00000377889 1993 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
CDC34P49427 STRADB-202ENST00000392249 2190 ntTSL 1 (best) BASIC15.05■□□□□ -0
CDC34P49427 SCARB1-203ENST00000415380 2731 ntTSL 2 BASIC15.05■□□□□ -0
CDC34P49427 PLA2G12A-201ENST00000243501 5226 ntAPPRIS P2 TSL 1 (best) BASIC15.05■□□□□ -0
CDC34P49427 MSANTD1-201ENST00000438480 2922 ntAPPRIS P3 TSL 5 BASIC15.04■□□□□ -0
CDC34P49427 SLC39A3-202ENST00000455372 2940 ntTSL 1 (best) BASIC15.04■□□□□ -0
CDC34P49427 POLI-207ENST00000579434 2705 ntTSL 1 (best) BASIC15.04■□□□□ -0
CDC34P49427 PCOLCE-AS1-201ENST00000442166 2537 ntTSL 2 BASIC15.04■□□□□ -0
CDC34P49427 SLCO6A1-201ENST00000379807 2437 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
CDC34P49427 TADA3-201ENST00000301964 2355 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
CDC34P49427 ARHGAP22-203ENST00000374172 2380 ntTSL 2 BASIC15.04■□□□□ -0
CDC34P49427 SMAD3-201ENST00000327367 6247 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
CDC34P49427 ARRB1-201ENST00000360025 1895 ntAPPRIS P3 TSL 1 (best) BASIC15.04■□□□□ -0
CDC34P49427 C8orf58-207ENST00000615223 1848 ntAPPRIS ALT2 TSL 5 BASIC15.04■□□□□ -0
CDC34P49427 HEXDC-201ENST00000327949 1733 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
CDC34P49427 PRSS33-201ENST00000293851 1694 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
CDC34P49427 CACNA1H-206ENST00000565831 7815 ntAPPRIS ALT2 TSL 1 (best) BASIC15.04■□□□□ -0
CDC34P49427 AC004854.2-201ENST00000608450 1441 ntBASIC15.04■□□□□ -0
CDC34P49427 ITGAV-202ENST00000374907 6903 ntAPPRIS ALT2 TSL 1 (best) BASIC15.04■□□□□ -0
CDC34P49427 CDKN2D-201ENST00000335766 1086 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
CDC34P49427 KRTAP5-2-201ENST00000412090 1118 ntAPPRIS P1 BASIC15.04■□□□□ -0
CDC34P49427 LINC01901-201ENST00000585822 1115 ntTSL 1 (best) BASIC15.04■□□□□ -0
CDC34P49427 AES-207ENST00000586839 942 ntTSL 1 (best) BASIC15.04■□□□□ -0
CDC34P49427 AC016405.3-201ENST00000607710 860 ntBASIC15.04■□□□□ -0
CDC34P49427 LINC00094-205ENST00000603928 5722 ntAPPRIS ALT2 TSL 2 BASIC15.04■□□□□ -0
CDC34P49427 CACNA1A-221ENST00000636012 7500 ntAPPRIS ALT2 TSL 5 BASIC15.04■□□□□ -0
CDC34P49427 GAREM2-202ENST00000407684 5138 ntTSL 2 BASIC15.04■□□□□ -0
CDC34P49427 NLGN2-201ENST00000302926 4642 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
CDC34P49427 CD248-201ENST00000311330 2558 ntAPPRIS P1 BASIC15.04■□□□□ -0
CDC34P49427 ZNF200-202ENST00000396870 2373 ntAPPRIS ALT2 TSL 1 (best) BASIC15.04■□□□□ -0
CDC34P49427 YTHDF3-212ENST00000621413 2370 ntTSL 5 BASIC15.04■□□□□ -0
CDC34P49427 PKMYT1-203ENST00000431515 2308 ntTSL 2 BASIC15.04■□□□□ -0
CDC34P49427 N4BP2L1-210ENST00000613078 2032 ntTSL 5 BASIC15.04■□□□□ -0
CDC34P49427 HOXD10-201ENST00000249501 1989 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
CDC34P49427 VKORC1L1-201ENST00000360768 5899 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
CDC34P49427 HOXC10-201ENST00000303460 1936 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
CDC34P49427 SH3BP4-202ENST00000392011 5194 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
CDC34P49427 SOCS2-210ENST00000551556 1716 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
CDC34P49427 FAM53A-207ENST00000489363 2776 ntTSL 2 BASIC15.03■□□□□ -0
CDC34P49427 TEKT5-201ENST00000283025 1612 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
CDC34P49427 ARHGAP11A-201ENST00000361627 5898 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
CDC34P49427 AC008060.1-201ENST00000401499 1551 ntTSL 1 (best) BASIC15.03■□□□□ -0
CDC34P49427 AC116351.2-201ENST00000606540 1585 ntBASIC15.03■□□□□ -0
CDC34P49427 ALKBH6-213ENST00000486389 1525 ntTSL 3 BASIC15.03■□□□□ -0
CDC34P49427 LINC01505-207ENST00000637185 1540 ntTSL 5 BASIC15.03■□□□□ -0
CDC34P49427 FAM131A-202ENST00000340957 2421 ntTSL 1 (best) BASIC15.03■□□□□ -0
CDC34P49427 SOST-201ENST00000301691 2300 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
CDC34P49427 TCTN1-225ENST00000551590 2309 ntAPPRIS ALT2 TSL 1 (best) BASIC15.03■□□□□ -0
CDC34P49427 EGFR-202ENST00000342916 2239 ntTSL 1 (best) BASIC15.03■□□□□ -0
CDC34P49427 PABPC1L-202ENST00000217074 1263 ntTSL 5 BASIC15.03■□□□□ -0
CDC34P49427 MRPL37-201ENST00000336230 1179 ntTSL 1 (best) BASIC15.03■□□□□ -0
CDC34P49427 TERF1P5-201ENST00000477545 1207 ntBASIC15.03■□□□□ -0
CDC34P49427 CARNS1-205ENST00000531040 2968 ntTSL 5 BASIC15.03■□□□□ -0
CDC34P49427 AC016888.1-201ENST00000585285 565 ntTSL 3 BASIC15.03■□□□□ -0
CDC34P49427 BRWD1-AS2-201ENST00000603064 1028 ntBASIC15.03■□□□□ -0
CDC34P49427 AC100791.3-201ENST00000617619 330 ntBASIC15.03■□□□□ -0
CDC34P49427 TFG-210ENST00000620299 1289 ntTSL 5 BASIC15.03■□□□□ -0
CDC34P49427 KIF5C-201ENST00000435030 6931 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
CDC34P49427 ARHGAP6-202ENST00000337414 5117 ntAPPRIS P4 TSL 1 (best) BASIC15.03■□□□□ -0
CDC34P49427 PTP4A3-202ENST00000349124 2710 ntTSL 1 (best) BASIC15.03■□□□□ -0
CDC34P49427 AL356309.3-201ENST00000624132 1934 ntBASIC15.03■□□□□ -0
CDC34P49427 ZNF131-206ENST00000505606 3209 ntAPPRIS P1 TSL 5 BASIC15.03■□□□□ -0
CDC34P49427 MCOLN2-201ENST00000284027 1729 ntAPPRIS P1 TSL 5 BASIC15.03■□□□□ -0
CDC34P49427 FBXL15-201ENST00000224862 2362 ntAPPRIS P2 TSL 1 (best) BASIC15.03■□□□□ -0
CDC34P49427 PRDM8-203ENST00000504452 3706 ntAPPRIS P1 TSL 5 BASIC15.03■□□□□ -0
CDC34P49427 ISYNA1-206ENST00000578963 1691 ntTSL 1 (best) BASIC15.03■□□□□ -0
CDC34P49427 ATXN7L2-202ENST00000369870 2318 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
CDC34P49427 GNAS-AS1-202ENST00000443966 2341 ntTSL 5 BASIC15.03■□□□□ -0
CDC34P49427 AC067852.2-201ENST00000590513 2313 ntBASIC15.03■□□□□ -0
CDC34P49427 DND1-201ENST00000542735 1605 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
CDC34P49427 C21orf91-203ENST00000400559 1593 ntAPPRIS ALT1 TSL 5 BASIC15.02■□□□□ -0
CDC34P49427 WDR41-208ENST00000507029 1553 ntTSL 2 BASIC15.02■□□□□ -0
CDC34P49427 CELF6-205ENST00000567083 1496 ntAPPRIS ALT2 TSL 2 BASIC15.02■□□□□ -0
CDC34P49427 AC118553.2-203ENST00000639037 2590 ntAPPRIS P5 TSL 5 BASIC15.02■□□□□ -0
CDC34P49427 BAIAP2-203ENST00000416299 1442 ntTSL 2 BASIC15.02■□□□□ -0
CDC34P49427 ENC1-205ENST00000510316 5381 ntTSL 2 BASIC15.02■□□□□ -0
CDC34P49427 ZBTB16-201ENST00000335953 2523 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
CDC34P49427 EIF3B-201ENST00000360876 3055 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
CDC34P49427 PCCA-202ENST00000376285 2494 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
CDC34P49427 GFY-201ENST00000576655 1876 ntAPPRIS P1 TSL 5 BASIC15.02■□□□□ -0
CDC34P49427 CDH23-205ENST00000398809 4533 ntTSL 5 BASIC15.02■□□□□ -0
CDC34P49427 RPL7-202ENST00000396465 1308 ntTSL 3 BASIC15.02■□□□□ -0
CDC34P49427 DUSP18-205ENST00000404885 1306 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
CDC34P49427 QPCTL-202ENST00000366382 1814 ntTSL 2 BASIC15.02■□□□□ -0
Retrieved 100 of 98,524 protein–RNA pairs in 38.4 ms