Protein–RNA interactions for Protein: P40939

HADHA, Trifunctional enzyme subunit alpha, mitochondrial, humanhuman

Predictions only

Length 763 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HADHAP40939 SDHAP1-207ENST00000440850 2000 ntBASIC19.27■□□□□ 0.67
HADHAP40939 SLC16A3-221ENST00000617373 2048 ntAPPRIS P1 TSL 5 BASIC19.27■□□□□ 0.67
HADHAP40939 SLC16A3-222ENST00000619321 2015 ntAPPRIS P1 TSL 5 BASIC19.27■□□□□ 0.67
HADHAP40939 HNRNPLL-206ENST00000410076 1687 ntTSL 1 (best) BASIC19.27■□□□□ 0.67
HADHAP40939 WDR34-201ENST00000372715 1755 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
HADHAP40939 FLT1-201ENST00000282397 7092 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
HADHAP40939 AL135905.2-201ENST00000584934 1404 ntBASIC19.26■□□□□ 0.67
HADHAP40939 P3H4-202ENST00000393928 2601 ntAPPRIS P2 TSL 1 (best) BASIC19.26■□□□□ 0.67
HADHAP40939 KCTD20-210ENST00000536244 5345 ntTSL 2 BASIC19.26■□□□□ 0.67
HADHAP40939 FBXL16-203ENST00000562563 2257 ntTSL 2 BASIC19.26■□□□□ 0.67
HADHAP40939 SLC35B2-205ENST00000538577 1909 ntTSL 2 BASIC19.26■□□□□ 0.67
HADHAP40939 ZKSCAN7-205ENST00000426540 2791 ntAPPRIS P1 TSL 2 BASIC19.26■□□□□ 0.67
HADHAP40939 MMP28-204ENST00000615136 2033 ntAPPRIS ALT2 TSL 1 (best) BASIC19.26■□□□□ 0.67
HADHAP40939 BIK-201ENST00000216115 953 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
HADHAP40939 CMTM8-201ENST00000307526 1174 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
HADHAP40939 SEC61A2-206ENST00000379051 707 ntTSL 3 BASIC19.26■□□□□ 0.67
HADHAP40939 KSR1P1-201ENST00000446298 240 ntBASIC19.26■□□□□ 0.67
HADHAP40939 KHDRBS1-204ENST00000492989 1215 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
HADHAP40939 ADAP1-217ENST00000611167 2118 ntTSL 5 BASIC19.26■□□□□ 0.67
HADHAP40939 TPGS2-221ENST00000614939 1268 ntTSL 4 BASIC19.26■□□□□ 0.67
HADHAP40939 AP006294.2-201ENST00000641667 209 ntBASIC19.26■□□□□ 0.67
HADHAP40939 ARHGAP11A-208ENST00000567348 2422 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
HADHAP40939 C1orf198-201ENST00000366663 3858 ntAPPRIS P3 TSL 1 (best) BASIC19.26■□□□□ 0.67
HADHAP40939 VBP1-201ENST00000286428 1686 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
HADHAP40939 SEPT9-246ENST00000592951 1793 ntAPPRIS ALT2 TSL 2 BASIC19.26■□□□□ 0.67
HADHAP40939 TFDP2-202ENST00000467072 1853 ntAPPRIS P3 TSL 1 (best) BASIC19.26■□□□□ 0.67
HADHAP40939 FOXP4-205ENST00000409208 3341 ntAPPRIS P1 TSL 5 BASIC19.26■□□□□ 0.67
HADHAP40939 MBD3-207ENST00000590550 2782 ntTSL 2 BASIC19.26■□□□□ 0.67
HADHAP40939 RPS6KB2-201ENST00000312629 1733 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
HADHAP40939 FAM87B-201ENST00000326734 1947 ntTSL 2 BASIC19.25■□□□□ 0.67
HADHAP40939 PRR5-ARHGAP8-201ENST00000352766 2043 ntAPPRIS P1 TSL 2 BASIC19.25■□□□□ 0.67
HADHAP40939 NCAN-201ENST00000252575 6387 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
HADHAP40939 IL4I1-201ENST00000341114 2349 ntAPPRIS P4 TSL 1 (best) BASIC19.25■□□□□ 0.67
HADHAP40939 FAM91A1-207ENST00000521166 2706 ntTSL 2 BASIC19.25■□□□□ 0.67
HADHAP40939 HCN2-201ENST00000251287 3408 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
HADHAP40939 TBC1D19-201ENST00000264866 2263 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
HADHAP40939 ILKAP-201ENST00000254654 1490 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
HADHAP40939 CTAG2-201ENST00000247306 993 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
HADHAP40939 HP1BP3-202ENST00000375000 928 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
HADHAP40939 TSPAN4-209ENST00000409543 1031 ntAPPRIS P1 TSL 5 BASIC19.25■□□□□ 0.67
HADHAP40939 DMRT2-206ENST00000412350 1244 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
HADHAP40939 AL158047.1-201ENST00000445918 881 ntBASIC19.25■□□□□ 0.67
HADHAP40939 AL590666.2-201ENST00000448869 758 ntTSL 2 BASIC19.25■□□□□ 0.67
HADHAP40939 RBCK1-213ENST00000475269 1200 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
HADHAP40939 DLEU7-203ENST00000504404 1122 ntAPPRIS ALT2 TSL 1 (best) BASIC19.25■□□□□ 0.67
HADHAP40939 CERNA3-201ENST00000521403 557 ntTSL 3 BASIC19.25■□□□□ 0.67
HADHAP40939 TK2-204ENST00000525974 1178 ntTSL 2 BASIC19.25■□□□□ 0.67
HADHAP40939 AC090877.2-202ENST00000560363 574 ntTSL 2 BASIC19.25■□□□□ 0.67
HADHAP40939 MRPL4-204ENST00000588502 827 ntTSL 2 BASIC19.25■□□□□ 0.67
HADHAP40939 CROCCP4-202ENST00000633627 573 ntTSL 3 BASIC19.25■□□□□ 0.67
HADHAP40939 UBR3-203ENST00000418381 7951 ntAPPRIS P1 TSL 5 BASIC19.25■□□□□ 0.67
HADHAP40939 LRRC27-203ENST00000368613 2113 ntAPPRIS P3 TSL 1 (best) BASIC19.25■□□□□ 0.67
HADHAP40939 DBNL-219ENST00000490734 2004 ntTSL 2 BASIC19.25■□□□□ 0.67
HADHAP40939 PDLIM2-204ENST00000397760 1847 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
HADHAP40939 KMT5B-203ENST00000401547 2666 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
HADHAP40939 SYBU-232ENST00000533171 2498 ntAPPRIS ALT2 TSL 2 BASIC19.25■□□□□ 0.67
HADHAP40939 COL5A3-201ENST00000264828 6174 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
HADHAP40939 DHRSX-201ENST00000334651 2571 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
HADHAP40939 KRT81-201ENST00000327741 1929 ntAPPRIS P2 TSL 1 (best) BASIC19.24■□□□□ 0.67
HADHAP40939 ARID1B-203ENST00000350026 7962 ntAPPRIS P3 TSL 1 (best) BASIC19.24■□□□□ 0.67
HADHAP40939 SPON2-203ENST00000431380 1802 ntAPPRIS P1 TSL 5 BASIC19.24■□□□□ 0.67
HADHAP40939 NDUFB10-201ENST00000268668 705 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
HADHAP40939 PTPRCAP-201ENST00000326294 1292 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
HADHAP40939 ABCC5-211ENST00000446941 883 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
HADHAP40939 AC019257.1-201ENST00000517676 557 ntTSL 5 BASIC19.24■□□□□ 0.67
HADHAP40939 RELB-201ENST00000221452 2294 ntAPPRIS P2 TSL 1 (best) BASIC19.24■□□□□ 0.67
HADHAP40939 ASB6-202ENST00000277459 2180 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
HADHAP40939 CASP16P-202ENST00000575497 2161 ntTSL 2 BASIC19.24■□□□□ 0.67
HADHAP40939 TMEM179-201ENST00000341595 2513 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
HADHAP40939 AL390860.1-201ENST00000449298 1541 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
HADHAP40939 MAPK9-207ENST00000452135 4815 ntAPPRIS P5 TSL 5 BASIC19.24■□□□□ 0.67
HADHAP40939 NUAK1-201ENST00000261402 6828 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
HADHAP40939 PAX1-201ENST00000398485 2838 ntAPPRIS P3 TSL 5 BASIC19.24■□□□□ 0.67
HADHAP40939 GGT2-201ENST00000401924 2366 ntAPPRIS P1 TSL 5 BASIC19.24■□□□□ 0.67
HADHAP40939 ZCCHC24-202ENST00000372336 4933 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
HADHAP40939 UBP1-202ENST00000283629 4148 ntAPPRIS P3 TSL 1 (best) BASIC19.23■□□□□ 0.67
HADHAP40939 ACHE-205ENST00000419336 1906 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
HADHAP40939 SEMA3B-210ENST00000611067 2292 ntAPPRIS ALT2 TSL 1 (best) BASIC19.23■□□□□ 0.67
HADHAP40939 FAM110D-201ENST00000374268 2858 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
HADHAP40939 KIF1BP-201ENST00000361983 2544 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
HADHAP40939 MOXD1-203ENST00000392401 2191 ntTSL 4 BASIC19.23■□□□□ 0.67
HADHAP40939 AC006333.2-201ENST00000607957 2099 ntBASIC19.23■□□□□ 0.67
HADHAP40939 FBXL20-202ENST00000394294 2309 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
HADHAP40939 CDKN2C-201ENST00000262662 2904 ntAPPRIS P1 TSL 2 BASIC19.23■□□□□ 0.67
HADHAP40939 SLC47A1-202ENST00000395585 1998 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
HADHAP40939 CWH43-201ENST00000226432 2472 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
HADHAP40939 RAC1-202ENST00000356142 907 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
HADHAP40939 PEX7-202ENST00000367756 680 ntTSL 3 BASIC19.23■□□□□ 0.67
HADHAP40939 RALGPS1-206ENST00000394011 819 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
HADHAP40939 C16orf90-202ENST00000437192 907 ntAPPRIS P1 TSL 5 BASIC19.23■□□□□ 0.67
HADHAP40939 BABAM1-202ENST00000447614 930 ntAPPRIS ALT2 TSL 5 BASIC19.23■□□□□ 0.67
HADHAP40939 AC137630.1-201ENST00000452042 782 ntTSL 4 BASIC19.23■□□□□ 0.67
HADHAP40939 HGNC:18790-208ENST00000506380 798 ntAPPRIS P1 TSL 3 BASIC19.23■□□□□ 0.67
HADHAP40939 BAALC-AS1-207ENST00000522856 594 ntTSL 3 BASIC19.23■□□□□ 0.67
HADHAP40939 AC091564.5-201ENST00000526456 820 ntTSL 4 BASIC19.23■□□□□ 0.67
HADHAP40939 TMEM72-203ENST00000544540 1018 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
HADHAP40939 DET1-205ENST00000558413 583 ntTSL 4 BASIC19.23■□□□□ 0.67
HADHAP40939 AF186192.3-201ENST00000583427 947 ntBASIC19.23■□□□□ 0.67
HADHAP40939 AC131212.4-201ENST00000623606 975 ntBASIC19.23■□□□□ 0.67
HADHAP40939 ST3GAL3-206ENST00000351035 2377 ntTSL 5 BASIC19.23■□□□□ 0.67
Retrieved 100 of 98,524 protein–RNA pairs in 26.7 ms