Protein–RNA interactions for Protein: P06753

TPM3, Tropomyosin alpha-3 chain, humanhuman

Predictions only

Length 285 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3P06753 WWOX-218ENST00000627394 894 ntTSL 5 BASIC21.35■■□□□ 1.01
TPM3P06753 SEMA6B-201ENST00000586582 3986 ntAPPRIS P2 TSL 1 (best) BASIC21.35■■□□□ 1.01
TPM3P06753 AC012414.5-201ENST00000564214 1602 ntTSL 5 BASIC21.35■■□□□ 1.01
TPM3P06753 GGNBP2-210ENST00000611219 2315 ntTSL 2 BASIC21.35■■□□□ 1.01
TPM3P06753 MAFF-201ENST00000338483 2490 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
TPM3P06753 HOXC10-201ENST00000303460 1936 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
TPM3P06753 DTD1-201ENST00000377452 1387 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
TPM3P06753 SIRT3-202ENST00000524564 1395 ntTSL 2 BASIC21.35■■□□□ 1.01
TPM3P06753 PLEKHG2-202ENST00000409797 2205 ntAPPRIS ALT2 TSL 2 BASIC21.35■■□□□ 1.01
TPM3P06753 CD177-203ENST00000618265 2222 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
TPM3P06753 RABL6-201ENST00000311502 3091 ntAPPRIS P3 TSL 1 (best) BASIC21.35■■□□□ 1.01
TPM3P06753 ANKRD18DP-201ENST00000335478 2171 ntTSL 2 BASIC21.34■■□□□ 1.01
TPM3P06753 PRORSD1P-202ENST00000563365 2154 ntBASIC21.34■■□□□ 1.01
TPM3P06753 FOXO3-202ENST00000406360 7341 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
TPM3P06753 MREG-201ENST00000263268 1314 ntAPPRIS P1 TSL 2 BASIC21.34■■□□□ 1.01
TPM3P06753 ZNRF2-201ENST00000323037 3460 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
TPM3P06753 PDLIM2-221ENST00000622702 1490 ntTSL 5 BASIC21.34■■□□□ 1.01
TPM3P06753 ZNF717-203ENST00000477374 1169 ntTSL 2 BASIC21.34■■□□□ 1.01
TPM3P06753 BX890604.1-207ENST00000486571 904 ntTSL 5 BASIC21.34■■□□□ 1.01
TPM3P06753 DUX4L16-201ENST00000555130 1264 ntBASIC21.34■■□□□ 1.01
TPM3P06753 AC016588.1-201ENST00000591533 542 ntTSL 4 BASIC21.34■■□□□ 1.01
TPM3P06753 UTP18-201ENST00000225298 1894 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
TPM3P06753 GATB-213ENST00000515812 1893 ntTSL 5 BASIC21.34■■□□□ 1.01
TPM3P06753 FZD10-202ENST00000539839 3282 ntBASIC21.34■■□□□ 1.01
TPM3P06753 ISLR2-202ENST00000419208 2306 ntTSL 1 (best) BASIC21.34■■□□□ 1.01
TPM3P06753 CDC42EP3-201ENST00000295324 5700 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
TPM3P06753 FAM53A-207ENST00000489363 2776 ntTSL 2 BASIC21.34■■□□□ 1.01
TPM3P06753 BOD1L2-201ENST00000585477 3239 ntAPPRIS P1 BASIC21.34■■□□□ 1.01
TPM3P06753 TSPAN14-203ENST00000372156 1380 ntAPPRIS P1 TSL 5 BASIC21.34■■□□□ 1.01
TPM3P06753 NAPRT-202ENST00000426292 1654 ntTSL 1 (best) BASIC21.34■■□□□ 1.01
TPM3P06753 SHISA3-201ENST00000319234 1971 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
TPM3P06753 PLA2G2F-201ENST00000375102 2723 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
TPM3P06753 TADA3-201ENST00000301964 2355 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
TPM3P06753 AC011944.1-201ENST00000316148 1900 ntTSL 2 BASIC21.33■■□□□ 1.01
TPM3P06753 PADI2-201ENST00000375481 1607 ntTSL 1 (best) BASIC21.33■■□□□ 1.01
TPM3P06753 BCS1L-201ENST00000359273 1454 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
TPM3P06753 CHRFAM7A-202ENST00000397827 2794 ntTSL 5 BASIC21.33■■□□□ 1.01
TPM3P06753 QPRT-202ENST00000395384 2343 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
TPM3P06753 SLC39A7-201ENST00000374675 2153 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
TPM3P06753 NFKBIB-201ENST00000313582 1159 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
TPM3P06753 AC016769.1-201ENST00000409132 1010 ntBASIC21.33■■□□□ 1.01
TPM3P06753 AC008105.3-201ENST00000586376 844 ntTSL 3 BASIC21.33■■□□□ 1.01
TPM3P06753 KLK9-202ENST00000594211 754 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
TPM3P06753 CARHSP1-219ENST00000618335 2972 ntAPPRIS P1 TSL 4 BASIC21.33■■□□□ 1.01
TPM3P06753 OR10C1-204ENST00000622521 1039 ntBASIC21.33■■□□□ 1.01
TPM3P06753 AEBP2-201ENST00000266508 3620 ntAPPRIS ALT2 TSL 1 (best) BASIC21.33■■□□□ 1
TPM3P06753 BSCL2-207ENST00000407022 1516 ntAPPRIS P3 TSL 1 (best) BASIC21.33■■□□□ 1
TPM3P06753 ALKBH6-213ENST00000486389 1525 ntTSL 3 BASIC21.33■■□□□ 1
TPM3P06753 HOXA9-201ENST00000343483 2060 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1
TPM3P06753 GNE-201ENST00000377902 2565 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1
TPM3P06753 RAB4B-EGLN2-201ENST00000594136 2554 ntAPPRIS P1 TSL 2 BASIC21.33■■□□□ 1
TPM3P06753 WNK1-206ENST00000535572 9886 ntAPPRIS ALT2 TSL 1 (best) BASIC21.33■■□□□ 1
TPM3P06753 MBD1-206ENST00000382948 2434 ntAPPRIS P3 TSL 2 BASIC21.33■■□□□ 1
TPM3P06753 PCSK5-202ENST00000376767 2845 ntTSL 2 BASIC21.33■■□□□ 1
TPM3P06753 NPDC1-202ENST00000371601 1494 ntAPPRIS P2 TSL 1 (best) BASIC21.32■■□□□ 1
TPM3P06753 TBX20-201ENST00000408931 1871 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
TPM3P06753 CXADR-201ENST00000284878 6254 ntAPPRIS P3 TSL 1 (best) BASIC21.32■■□□□ 1
TPM3P06753 GOSR2-226ENST00000639287 2367 ntTSL 5 BASIC21.32■■□□□ 1
TPM3P06753 ARSA-203ENST00000395619 1824 ntAPPRIS P1 TSL 5 BASIC21.32■■□□□ 1
TPM3P06753 FDXR-202ENST00000413947 1809 ntTSL 2 BASIC21.32■■□□□ 1
TPM3P06753 IRX1P1-201ENST00000438849 1838 ntBASIC21.32■■□□□ 1
TPM3P06753 FER1L4-211ENST00000616283 1818 ntTSL 1 (best) BASIC21.32■■□□□ 1
TPM3P06753 PROSER1-201ENST00000352251 5168 ntAPPRIS P2 TSL 1 (best) BASIC21.32■■□□□ 1
TPM3P06753 UBFD1-201ENST00000395878 5110 ntAPPRIS P2 TSL 2 BASIC21.32■■□□□ 1
TPM3P06753 CLDND1-203ENST00000394181 2170 ntTSL 1 (best) BASIC21.32■■□□□ 1
TPM3P06753 GGTLC1-201ENST00000278765 974 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
TPM3P06753 MZB1-201ENST00000302125 825 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
TPM3P06753 CLDN3-201ENST00000395145 1274 ntAPPRIS P1 BASIC21.32■■□□□ 1
TPM3P06753 ZNRF2P3-201ENST00000424200 374 ntBASIC21.32■■□□□ 1
TPM3P06753 AC007773.1-201ENST00000592680 972 ntTSL 2 BASIC21.32■■□□□ 1
TPM3P06753 ARHGEF18-201ENST00000319670 5212 ntAPPRIS P3 TSL 1 (best) BASIC21.32■■□□□ 1
TPM3P06753 OSR2-210ENST00000523368 1519 ntTSL 1 (best) BASIC21.32■■□□□ 1
TPM3P06753 SSUH2-202ENST00000341795 1799 ntAPPRIS P3 TSL 1 (best) BASIC21.32■■□□□ 1
TPM3P06753 TRIM50-201ENST00000333149 2047 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
TPM3P06753 NFATC4-228ENST00000556759 2025 ntTSL 1 (best) BASIC21.32■■□□□ 1
TPM3P06753 MEPCE-202ENST00000414441 2261 ntTSL 2 BASIC21.32■■□□□ 1
TPM3P06753 SHKBP1-201ENST00000291842 2363 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
TPM3P06753 LENG8-202ENST00000376514 5146 ntAPPRIS ALT2 TSL 5 BASIC21.32■■□□□ 1
TPM3P06753 CELF6-205ENST00000567083 1496 ntAPPRIS ALT2 TSL 2 BASIC21.32■■□□□ 1
TPM3P06753 NUDT15-201ENST00000258662 2098 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
TPM3P06753 VWA8-AS1-201ENST00000611103 2079 ntTSL 2 BASIC21.32■■□□□ 1
TPM3P06753 MSANTD1-201ENST00000438480 2922 ntAPPRIS P3 TSL 5 BASIC21.32■■□□□ 1
TPM3P06753 C19orf25-203ENST00000585675 1837 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
TPM3P06753 GOLGA6L2-204ENST00000567107 3030 ntAPPRIS P2 TSL 5 BASIC21.31■■□□□ 1
TPM3P06753 ALDH7A1-215ENST00000553117 1935 ntTSL 2 BASIC21.31■■□□□ 1
TPM3P06753 RBFOX1-204ENST00000422070 1684 ntTSL 2 BASIC21.31■■□□□ 1
TPM3P06753 ATPAF1-214ENST00000576409 4158 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
TPM3P06753 AC010980.2-201ENST00000587099 1412 ntBASIC21.31■■□□□ 1
TPM3P06753 RAB28-203ENST00000338176 1787 ntTSL 3 BASIC21.31■■□□□ 1
TPM3P06753 CNNM3-201ENST00000305510 3447 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
TPM3P06753 KCTD2-201ENST00000322444 3635 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
TPM3P06753 ITGA8-201ENST00000378076 6755 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
TPM3P06753 SOST-201ENST00000301691 2300 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
TPM3P06753 HACD1-201ENST00000326961 773 ntTSL 2 BASIC21.31■■□□□ 1
TPM3P06753 CFD-201ENST00000327726 1201 ntAPPRIS P3 TSL 1 (best) BASIC21.31■■□□□ 1
TPM3P06753 ZNF644-203ENST00000361321 1253 ntTSL 2 BASIC21.31■■□□□ 1
TPM3P06753 LINC01942-201ENST00000521373 513 ntTSL 4 BASIC21.31■■□□□ 1
TPM3P06753 AIPL1-206ENST00000571740 1202 ntAPPRIS ALT2 TSL 1 (best) BASIC21.31■■□□□ 1
TPM3P06753 FAM222B-213ENST00000583522 556 ntTSL 2 BASIC21.31■■□□□ 1
TPM3P06753 VAV1-204ENST00000596764 2775 ntTSL 2 BASIC21.31■■□□□ 1
Retrieved 100 of 98,524 protein–RNA pairs in 27.9 ms