Protein–RNA interactions for Protein: P02538

KRT6A, Keratin, type II cytoskeletal 6A, humanhuman

Predictions only

Length 564 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRT6AP02538 NPIPA8-201ENST00000525596 1565 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
KRT6AP02538 BCAT2-208ENST00000598162 1329 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
KRT6AP02538 RNF167-205ENST00000571816 1728 ntAPPRIS P3 TSL 5 BASIC18.46■□□□□ 0.55
KRT6AP02538 TPCN2-201ENST00000294309 2931 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
KRT6AP02538 SIM2-201ENST00000290399 4442 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.54
KRT6AP02538 TSPAN4-204ENST00000397404 1462 ntAPPRIS P1 TSL 5 BASIC18.46■□□□□ 0.54
KRT6AP02538 ETV4-201ENST00000319349 2429 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
KRT6AP02538 SLC39A1-209ENST00000537590 2022 ntTSL 2 BASIC18.45■□□□□ 0.54
KRT6AP02538 RFTN1-201ENST00000334133 2982 ntAPPRIS P2 TSL 1 (best) BASIC18.45■□□□□ 0.54
KRT6AP02538 ADPGK-201ENST00000311669 2557 ntAPPRIS P1 TSL 2 BASIC18.45■□□□□ 0.54
KRT6AP02538 CAPS-201ENST00000452990 1789 ntTSL 5 BASIC18.45■□□□□ 0.54
KRT6AP02538 SNRPN-207ENST00000554227 1763 ntTSL 5 BASIC18.45■□□□□ 0.54
KRT6AP02538 SEPT9-246ENST00000592951 1793 ntAPPRIS ALT2 TSL 2 BASIC18.45■□□□□ 0.54
KRT6AP02538 KRT81-201ENST00000327741 1929 ntAPPRIS P2 TSL 1 (best) BASIC18.45■□□□□ 0.54
KRT6AP02538 CACNA1A-214ENST00000614285 8410 ntAPPRIS ALT2 TSL 5 BASIC18.45■□□□□ 0.54
KRT6AP02538 FAM189B-204ENST00000368368 2609 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
KRT6AP02538 CCDC106-201ENST00000308964 1546 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
KRT6AP02538 PGAM1-201ENST00000334828 1830 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
KRT6AP02538 TXNRD3-205ENST00000640797 1824 ntAPPRIS ALT2 TSL 2 BASIC18.45■□□□□ 0.54
KRT6AP02538 SLC3A2-202ENST00000377889 1993 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
KRT6AP02538 OGFOD2-207ENST00000536150 1956 ntTSL 2 BASIC18.45■□□□□ 0.54
KRT6AP02538 CBSL-210ENST00000624934 1992 ntTSL 5 BASIC18.45■□□□□ 0.54
KRT6AP02538 CLTA-202ENST00000345519 1073 ntAPPRIS ALT1 TSL 1 (best) BASIC18.45■□□□□ 0.54
KRT6AP02538 IPO13-201ENST00000372339 1201 ntTSL 2 BASIC18.45■□□□□ 0.54
KRT6AP02538 MPV17L-202ENST00000396385 1037 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
KRT6AP02538 ZNF436-AS1-202ENST00000437367 606 ntTSL 2 BASIC18.45■□□□□ 0.54
KRT6AP02538 AP000282.1-201ENST00000454622 682 ntTSL 2 BASIC18.45■□□□□ 0.54
KRT6AP02538 AC108693.2-201ENST00000492981 303 ntTSL 3 BASIC18.45■□□□□ 0.54
KRT6AP02538 SCARA5-203ENST00000518030 1074 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
KRT6AP02538 FADS3-204ENST00000525588 1254 ntTSL 5 BASIC18.45■□□□□ 0.54
KRT6AP02538 HLA-A-209ENST00000638375 975 ntBASIC18.45■□□□□ 0.54
KRT6AP02538 SLC35A3-218ENST00000639994 1114 ntTSL 5 BASIC18.45■□□□□ 0.54
KRT6AP02538 GATM-201ENST00000396659 2597 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
KRT6AP02538 WBP2-213ENST00000590221 1745 ntAPPRIS ALT1 TSL 3 BASIC18.45■□□□□ 0.54
KRT6AP02538 UTP18-201ENST00000225298 1894 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
KRT6AP02538 KLHL14-201ENST00000358095 1884 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
KRT6AP02538 WIPF1-202ENST00000359761 2003 ntAPPRIS P2 TSL 1 (best) BASIC18.45■□□□□ 0.54
KRT6AP02538 ACVR1B-203ENST00000426655 1782 ntTSL 2 BASIC18.45■□□□□ 0.54
KRT6AP02538 CTBP2-214ENST00000531469 1918 ntAPPRIS P1 TSL 2 BASIC18.45■□□□□ 0.54
KRT6AP02538 SPAG9-202ENST00000357122 4761 ntAPPRIS P2 TSL 1 (best) BASIC18.45■□□□□ 0.54
KRT6AP02538 CACNA1B-205ENST00000371363 9758 ntAPPRIS ALT2 TSL 5 BASIC18.44■□□□□ 0.54
KRT6AP02538 IL10RB-201ENST00000290200 1963 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
KRT6AP02538 PODNL1-203ENST00000538371 1826 ntAPPRIS ALT2 TSL 2 BASIC18.44■□□□□ 0.54
KRT6AP02538 KTI12-201ENST00000371614 1714 ntAPPRIS P1 BASIC18.44■□□□□ 0.54
KRT6AP02538 POU5F1-201ENST00000259915 1420 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
KRT6AP02538 ASB18-201ENST00000409749 1401 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
KRT6AP02538 CD177-203ENST00000618265 2222 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
KRT6AP02538 CORO1B-210ENST00000627576 960 ntTSL 5 BASIC18.44■□□□□ 0.54
KRT6AP02538 LTBP3-202ENST00000322147 4046 ntAPPRIS P3 TSL 1 (best) BASIC18.44■□□□□ 0.54
KRT6AP02538 OTUD1-201ENST00000376495 2933 ntAPPRIS P1 BASIC18.44■□□□□ 0.54
KRT6AP02538 IL6R-208ENST00000622330 1496 ntAPPRIS ALT2 TSL 1 (best) BASIC18.44■□□□□ 0.54
KRT6AP02538 RNASEH2C-203ENST00000528220 1337 ntTSL 2 BASIC18.44■□□□□ 0.54
KRT6AP02538 GDPD1-201ENST00000284116 1821 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
KRT6AP02538 CARD9-202ENST00000371734 1814 ntTSL 5 BASIC18.44■□□□□ 0.54
KRT6AP02538 LAMP1-201ENST00000332556 2699 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
KRT6AP02538 TMEM230-206ENST00000379283 1660 ntAPPRIS P1 TSL 3 BASIC18.44■□□□□ 0.54
KRT6AP02538 PDZD7-201ENST00000370215 2032 ntTSL 2 BASIC18.44■□□□□ 0.54
KRT6AP02538 UBN1-201ENST00000262376 6252 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
KRT6AP02538 AGAP4-201ENST00000311652 2715 ntAPPRIS ALT2 TSL 1 (best) BASIC18.43■□□□□ 0.54
KRT6AP02538 DNLZ-202ENST00000371739 2934 ntTSL 5 BASIC18.43■□□□□ 0.54
KRT6AP02538 ANHX-202ENST00000545940 3452 ntAPPRIS P1 TSL 5 BASIC18.43■□□□□ 0.54
KRT6AP02538 EHMT1-203ENST00000460843 5137 ntAPPRIS P2 TSL 5 BASIC18.43■□□□□ 0.54
KRT6AP02538 CCDC34-201ENST00000317945 2109 ntAPPRIS P3 TSL 1 (best) BASIC18.43■□□□□ 0.54
KRT6AP02538 TNPO2-201ENST00000356861 4962 ntAPPRIS ALT1 TSL 1 (best) BASIC18.43■□□□□ 0.54
KRT6AP02538 ATXN7L2-202ENST00000369870 2318 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
KRT6AP02538 MMP9-201ENST00000372330 2336 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
KRT6AP02538 HTRA3-201ENST00000307358 2541 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
KRT6AP02538 SEMA3D-202ENST00000444867 1605 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
KRT6AP02538 MLLT1-201ENST00000252674 4507 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
KRT6AP02538 FIP1L1-202ENST00000337488 2198 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
KRT6AP02538 FIP1L1-203ENST00000358575 2180 ntAPPRIS P4 TSL 2 BASIC18.43■□□□□ 0.54
KRT6AP02538 TCAIM-203ENST00000396078 2178 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
KRT6AP02538 CYTH1-209ENST00000589296 2159 ntTSL 5 BASIC18.43■□□□□ 0.54
KRT6AP02538 ABHD14A-201ENST00000273596 1062 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
KRT6AP02538 LCN6-203ENST00000476567 1015 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
KRT6AP02538 KCTD10-211ENST00000540411 866 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
KRT6AP02538 ARF3-208ENST00000541959 807 ntAPPRIS P1 TSL 5 BASIC18.43■□□□□ 0.54
KRT6AP02538 OPA3-203ENST00000544371 1146 ntTSL 2 BASIC18.43■□□□□ 0.54
KRT6AP02538 MIR381HG-201ENST00000553692 425 ntTSL 3 BASIC18.43■□□□□ 0.54
KRT6AP02538 NOMO3-202ENST00000399336 4356 ntAPPRIS P2 TSL 1 (best) BASIC18.43■□□□□ 0.54
KRT6AP02538 RUNX2-202ENST00000371432 5487 ntAPPRIS ALT2 TSL 5 BASIC18.43■□□□□ 0.54
KRT6AP02538 GOSR2-226ENST00000639287 2367 ntTSL 5 BASIC18.43■□□□□ 0.54
KRT6AP02538 FBXO41-205ENST00000521871 7336 ntAPPRIS P1 TSL 5 BASIC18.43■□□□□ 0.54
KRT6AP02538 AHCYL2-201ENST00000325006 5056 ntAPPRIS P3 TSL 1 (best) BASIC18.43■□□□□ 0.54
KRT6AP02538 AC011944.1-201ENST00000316148 1900 ntTSL 2 BASIC18.43■□□□□ 0.54
KRT6AP02538 PODN-203ENST00000395871 2744 ntTSL 5 BASIC18.43■□□□□ 0.54
KRT6AP02538 TMEM131-201ENST00000186436 6640 ntAPPRIS P1 TSL 5 BASIC18.43■□□□□ 0.54
KRT6AP02538 SEPT2-203ENST00000391971 3315 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
KRT6AP02538 THOC6-209ENST00000575576 1360 ntTSL 5 BASIC18.42■□□□□ 0.54
KRT6AP02538 FIGNL2-201ENST00000564840 4693 ntAPPRIS P1 TSL 5 BASIC18.42■□□□□ 0.54
KRT6AP02538 TWF2-203ENST00000499914 1440 ntTSL 5 BASIC18.42■□□□□ 0.54
KRT6AP02538 C16orf58-202ENST00000430477 2471 ntAPPRIS P2 TSL 1 (best) BASIC18.42■□□□□ 0.54
KRT6AP02538 KLHL23-201ENST00000272797 2087 ntAPPRIS P1 TSL 2 BASIC18.42■□□□□ 0.54
KRT6AP02538 NFKBIZ-201ENST00000326151 2058 ntTSL 2 BASIC18.42■□□□□ 0.54
KRT6AP02538 IQGAP2-201ENST00000274364 5844 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
KRT6AP02538 ENOPH1-203ENST00000509635 1874 ntTSL 3 BASIC18.42■□□□□ 0.54
KRT6AP02538 GRK6-201ENST00000355472 2939 ntAPPRIS P3 TSL 1 (best) BASIC18.42■□□□□ 0.54
KRT6AP02538 MAN2A1-201ENST00000261483 4667 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
KRT6AP02538 AC239809.2-201ENST00000415381 517 ntBASIC18.42■□□□□ 0.54
KRT6AP02538 METTL21A-204ENST00000425132 869 ntTSL 2 BASIC18.42■□□□□ 0.54
Retrieved 100 of 98,524 protein–RNA pairs in 39.4 ms