Protein–RNA interactions for Protein: O95503

CBX6, Chromobox protein homolog 6, humanhuman

Predictions only

Length 412 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CBX6O95503 CFP-201ENST00000247153 1713 ntAPPRIS P2 TSL 5 BASIC18.96■□□□□ 0.63
CBX6O95503 GTF2H4-201ENST00000259895 1735 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
CBX6O95503 LRRC43-201ENST00000339777 2028 ntAPPRIS P2 TSL 5 BASIC18.96■□□□□ 0.63
CBX6O95503 N4BP2L1-210ENST00000613078 2032 ntTSL 5 BASIC18.96■□□□□ 0.63
CBX6O95503 CLDND1-203ENST00000394181 2170 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
CBX6O95503 CFAP77-203ENST00000393216 1638 ntAPPRIS ALT2 TSL 1 (best) BASIC18.96■□□□□ 0.63
CBX6O95503 RNH1-202ENST00000356187 1791 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
CBX6O95503 Z98044.1-201ENST00000632503 1764 ntBASIC18.96■□□□□ 0.63
CBX6O95503 CHRNA10-201ENST00000250699 1945 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
CBX6O95503 UPP1-201ENST00000331803 1932 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
CBX6O95503 ARPC4-201ENST00000397261 2582 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
CBX6O95503 EMC8-201ENST00000253457 1962 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
CBX6O95503 TMEM191A-208ENST00000450925 1961 ntTSL 2 BASIC18.95■□□□□ 0.62
CBX6O95503 PQLC2-202ENST00000375155 1805 ntAPPRIS P1 TSL 2 BASIC18.95■□□□□ 0.62
CBX6O95503 PLEKHG5-201ENST00000340850 4715 ntAPPRIS P3 TSL 5 BASIC18.95■□□□□ 0.62
CBX6O95503 PLEKHG5-211ENST00000535355 4725 ntAPPRIS ALT2 TSL 2 BASIC18.95■□□□□ 0.62
CBX6O95503 CTSD-212ENST00000637815 2003 ntAPPRIS ALT2 TSL 5 BASIC18.95■□□□□ 0.62
CBX6O95503 AC093525.10-201ENST00000625130 1569 ntBASIC18.95■□□□□ 0.62
CBX6O95503 SYNGR1-201ENST00000216155 497 ntTSL 3 BASIC18.95■□□□□ 0.62
CBX6O95503 GGTLC1-201ENST00000278765 974 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
CBX6O95503 VKORC1-204ENST00000394971 664 ntTSL 5 BASIC18.95■□□□□ 0.62
CBX6O95503 SERPINH1P1-201ENST00000419794 1249 ntBASIC18.95■□□□□ 0.62
CBX6O95503 UBE2SP1-201ENST00000450587 669 ntBASIC18.95■□□□□ 0.62
CBX6O95503 AC008667.2-201ENST00000504413 469 ntTSL 3 BASIC18.95■□□□□ 0.62
CBX6O95503 LINC01962-201ENST00000513771 411 ntTSL 2 BASIC18.95■□□□□ 0.62
CBX6O95503 YIF1B-213ENST00000591755 1077 ntTSL 2 BASIC18.95■□□□□ 0.62
CBX6O95503 DEDD2-205ENST00000596251 1183 ntAPPRIS P3 TSL 1 (best) BASIC18.95■□□□□ 0.62
CBX6O95503 TDP2-202ENST00000378198 2071 ntAPPRIS P2 TSL 1 (best) BASIC18.95■□□□□ 0.62
CBX6O95503 TOR3A-203ENST00000367627 2724 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
CBX6O95503 RAB4B-EGLN2-201ENST00000594136 2554 ntAPPRIS P1 TSL 2 BASIC18.95■□□□□ 0.62
CBX6O95503 CAPZB-205ENST00000433834 1462 ntTSL 2 BASIC18.95■□□□□ 0.62
CBX6O95503 HSDL1-202ENST00000434463 1493 ntTSL 2 BASIC18.95■□□□□ 0.62
CBX6O95503 NOMO2-212ENST00000622306 4252 ntAPPRIS P3 TSL 1 (best) BASIC18.95■□□□□ 0.62
CBX6O95503 VPS26A-202ENST00000373382 3229 ntAPPRIS P1 TSL 5 BASIC18.95■□□□□ 0.62
CBX6O95503 CD276-201ENST00000318424 2738 ntTSL 5 BASIC18.94■□□□□ 0.62
CBX6O95503 ADPGK-AS1-201ENST00000563592 2730 ntTSL 2 BASIC18.94■□□□□ 0.62
CBX6O95503 AC114490.1-202ENST00000311990 1887 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
CBX6O95503 SEMA3B-209ENST00000456560 2221 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
CBX6O95503 WDR88-201ENST00000355868 1718 ntAPPRIS P2 TSL 2 BASIC18.94■□□□□ 0.62
CBX6O95503 MCIDAS-201ENST00000513312 1736 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
CBX6O95503 MRPS7-204ENST00000579761 1717 ntTSL 2 BASIC18.94■□□□□ 0.62
CBX6O95503 MADCAM1-201ENST00000215637 1572 ntAPPRIS P4 TSL 1 (best) BASIC18.94■□□□□ 0.62
CBX6O95503 FOXN3-209ENST00000555353 1595 ntAPPRIS P3 TSL 1 (best) BASIC18.94■□□□□ 0.62
CBX6O95503 SMPD3-201ENST00000219334 5453 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
CBX6O95503 SIGLEC10-204ENST00000436984 1776 ntTSL 2 BASIC18.94■□□□□ 0.62
CBX6O95503 CCS-208ENST00000533244 1430 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
CBX6O95503 TPPP3-204ENST00000562206 1410 ntAPPRIS P1 TSL 2 BASIC18.94■□□□□ 0.62
CBX6O95503 PHLDA1-202ENST00000602540 5741 ntAPPRIS ALT2 TSL 1 (best) BASIC18.94■□□□□ 0.62
CBX6O95503 MLLT1-201ENST00000252674 4507 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
CBX6O95503 ZNF394-201ENST00000337673 2179 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
CBX6O95503 NENF-201ENST00000366988 949 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
CBX6O95503 PEX7-202ENST00000367756 680 ntTSL 3 BASIC18.94■□□□□ 0.62
CBX6O95503 AL121761.1-202ENST00000412571 415 ntTSL 2 BASIC18.94■□□□□ 0.62
CBX6O95503 NCBP2-207ENST00000452404 1133 ntTSL 2 BASIC18.94■□□□□ 0.62
CBX6O95503 HTT-AS-201ENST00000503893 515 ntTSL 4 BASIC18.94■□□□□ 0.62
CBX6O95503 SPI1-204ENST00000533968 1290 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
CBX6O95503 AC092143.2-201ENST00000554623 985 ntTSL 3 BASIC18.94■□□□□ 0.62
CBX6O95503 PLK5-204ENST00000588430 900 ntAPPRIS ALT2 TSL 5 BASIC18.94■□□□□ 0.62
CBX6O95503 AC007993.2-201ENST00000592842 521 ntTSL 4 BASIC18.94■□□□□ 0.62
CBX6O95503 AC243732.1-201ENST00000612648 864 ntBASIC18.94■□□□□ 0.62
CBX6O95503 AC244517.4-202ENST00000624089 484 ntTSL 3 BASIC18.94■□□□□ 0.62
CBX6O95503 BRSK2-215ENST00000544817 1842 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
CBX6O95503 ZNF771-202ENST00000434417 1454 ntAPPRIS P1 TSL 2 BASIC18.94■□□□□ 0.62
CBX6O95503 TES-201ENST00000358204 2782 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
CBX6O95503 DUSP18-205ENST00000404885 1306 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
CBX6O95503 NPNT-203ENST00000427316 2481 ntAPPRIS ALT2 TSL 2 BASIC18.94■□□□□ 0.62
CBX6O95503 VHL-202ENST00000345392 2696 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
CBX6O95503 TSGA10IP-203ENST00000532620 1925 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
CBX6O95503 PYCR1-216ENST00000619204 1904 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
CBX6O95503 TRAPPC12-201ENST00000324266 2508 ntAPPRIS P2 TSL 1 (best) BASIC18.94■□□□□ 0.62
CBX6O95503 SLC3A2-202ENST00000377889 1993 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
CBX6O95503 SYTL1-208ENST00000543823 2229 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
CBX6O95503 AC087633.2-202ENST00000565166 1439 ntBASIC18.93■□□□□ 0.62
CBX6O95503 SNAP23-201ENST00000249647 2687 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
CBX6O95503 AP003071.5-201ENST00000641568 2695 ntAPPRIS P1 BASIC18.93■□□□□ 0.62
CBX6O95503 PRDM8-203ENST00000504452 3706 ntAPPRIS P1 TSL 5 BASIC18.93■□□□□ 0.62
CBX6O95503 OLFM1-202ENST00000277415 1014 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
CBX6O95503 CD99-203ENST00000381184 918 ntAPPRIS ALT2 TSL 5 BASIC18.93■□□□□ 0.62
CBX6O95503 ART5-202ENST00000397067 1154 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
CBX6O95503 ELF3-AS1-202ENST00000419190 788 ntTSL 2 BASIC18.93■□□□□ 0.62
CBX6O95503 YKT6-207ENST00000496112 1270 ntTSL 2 BASIC18.93■□□□□ 0.62
CBX6O95503 AC022167.3-201ENST00000564485 427 ntTSL 2 BASIC18.93■□□□□ 0.62
CBX6O95503 USP39-202ENST00000409025 1946 ntTSL 5 BASIC18.93■□□□□ 0.62
CBX6O95503 HCK-206ENST00000518730 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC18.93■□□□□ 0.62
CBX6O95503 KDM1A-201ENST00000356634 3033 ntAPPRIS P3 TSL 1 (best) BASIC18.93■□□□□ 0.62
CBX6O95503 NRG2-205ENST00000361474 3020 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
CBX6O95503 PTX4-203ENST00000447419 1516 ntAPPRIS ALT2 TSL 5 BASIC18.93■□□□□ 0.62
CBX6O95503 CD276-203ENST00000537340 2439 ntTSL 2 BASIC18.93■□□□□ 0.62
CBX6O95503 CHRAC1-201ENST00000220913 2488 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
CBX6O95503 FGFR3-202ENST00000340107 4293 ntAPPRIS ALT2 TSL 5 BASIC18.93■□□□□ 0.62
CBX6O95503 SCARB1-211ENST00000546215 1597 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
CBX6O95503 RPUSD2-202ENST00000559271 1558 ntAPPRIS ALT2 TSL 2 BASIC18.93■□□□□ 0.62
CBX6O95503 EARS2-210ENST00000564501 2027 ntTSL 5 BASIC18.93■□□□□ 0.62
CBX6O95503 MEPCE-202ENST00000414441 2261 ntTSL 2 BASIC18.93■□□□□ 0.62
CBX6O95503 INTS11-209ENST00000450926 1839 ntTSL 5 BASIC18.93■□□□□ 0.62
CBX6O95503 CARNS1-205ENST00000531040 2968 ntTSL 5 BASIC18.93■□□□□ 0.62
CBX6O95503 NUDT4-202ENST00000415493 4839 ntAPPRIS ALT1 TSL 1 (best) BASIC18.93■□□□□ 0.62
CBX6O95503 HYAL1-204ENST00000395144 2081 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
CBX6O95503 AC127496.1-202ENST00000573602 2091 ntTSL 2 BASIC18.93■□□□□ 0.62
CBX6O95503 SLC25A48-201ENST00000274513 1880 ntTSL 2 BASIC18.92■□□□□ 0.62
Retrieved 100 of 98,524 protein–RNA pairs in 21 ms