Protein–RNA interactions for Protein: O76070

SNCG, Gamma-synuclein, humanhuman

Predictions only

Length 127 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNCGO76070 PGAP3-206ENST00000579146 2220 ntTSL 2 BASIC12.83□□□□□ -0.36
SNCGO76070 YBX1P4-201ENST00000392794 808 ntBASIC12.83□□□□□ -0.36
SNCGO76070 DNAJC27-AS1-204ENST00000428614 780 ntTSL 3 BASIC12.83□□□□□ -0.36
SNCGO76070 RPS2-202ENST00000526522 924 ntTSL 2 BASIC12.83□□□□□ -0.36
SNCGO76070 PKNOX2-AS1-201ENST00000532316 586 ntTSL 3 BASIC12.83□□□□□ -0.36
SNCGO76070 ZNF606-203ENST00000547121 1196 ntTSL 2 BASIC12.83□□□□□ -0.36
SNCGO76070 OIP5-AS1-208ENST00000560706 473 ntTSL 5 BASIC12.83□□□□□ -0.36
SNCGO76070 MIR4508-201ENST00000584178 70 ntBASIC12.83□□□□□ -0.36
SNCGO76070 IRF2BP2-202ENST00000366610 4615 ntAPPRIS ALT2 TSL 1 (best) BASIC12.83□□□□□ -0.36
SNCGO76070 KCNMA1-202ENST00000286628 6233 ntAPPRIS ALT2 TSL 1 (best) BASIC12.83□□□□□ -0.36
SNCGO76070 JADE2-201ENST00000282605 2748 ntAPPRIS P1 TSL 2 BASIC12.83□□□□□ -0.36
SNCGO76070 NSDHL-201ENST00000370274 1929 ntAPPRIS P2 TSL 1 (best) BASIC12.83□□□□□ -0.36
SNCGO76070 SETD1B-203ENST00000604567 5969 ntAPPRIS ALT2 TSL 5 BASIC12.83□□□□□ -0.36
SNCGO76070 NADSYN1-201ENST00000319023 2773 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
SNCGO76070 TUSC3-203ENST00000503731 1498 ntAPPRIS P4 TSL 1 (best) BASIC12.83□□□□□ -0.36
SNCGO76070 CCNYL1-201ENST00000295414 3767 ntTSL 5 BASIC12.83□□□□□ -0.36
SNCGO76070 TIMP3-201ENST00000266085 4603 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
SNCGO76070 GLRX3-201ENST00000331244 1302 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
SNCGO76070 LINC01819-201ENST00000422351 2156 ntTSL 5 BASIC12.83□□□□□ -0.36
SNCGO76070 NAPRT-202ENST00000426292 1654 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
SNCGO76070 LINC01558-202ENST00000495520 1652 ntTSL 2 BASIC12.83□□□□□ -0.36
SNCGO76070 SSC5D-202ENST00000587166 3017 ntAPPRIS ALT2 TSL 1 (best) BASIC12.83□□□□□ -0.36
SNCGO76070 YBX1-201ENST00000321358 1514 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
SNCGO76070 SOX30-202ENST00000311371 2716 ntAPPRIS ALT2 TSL 1 (best) BASIC12.82□□□□□ -0.36
SNCGO76070 COQ10B-201ENST00000263960 2239 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
SNCGO76070 MTMR6-201ENST00000381801 5659 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
SNCGO76070 FDXR-203ENST00000420580 1705 ntTSL 2 BASIC12.82□□□□□ -0.36
SNCGO76070 RNF31-201ENST00000324103 3627 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
SNCGO76070 SIPA1L3-201ENST00000222345 7987 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
SNCGO76070 LINC01465-201ENST00000408887 1940 ntBASIC12.82□□□□□ -0.36
SNCGO76070 PITX2-203ENST00000355080 2100 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
SNCGO76070 RAB34-204ENST00000395245 1766 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
SNCGO76070 MIB2-202ENST00000378708 3012 ntAPPRIS ALT2 TSL 5 BASIC12.82□□□□□ -0.36
SNCGO76070 VPS37C-201ENST00000301765 2865 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
SNCGO76070 SETD1A-201ENST00000262519 6451 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
SNCGO76070 MID1IP1-201ENST00000336949 2536 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
SNCGO76070 DENND1A-202ENST00000373620 3612 ntAPPRIS ALT2 TSL 1 (best) BASIC12.82□□□□□ -0.36
SNCGO76070 MTDH-203ENST00000519934 2184 ntTSL 5 BASIC12.82□□□□□ -0.36
SNCGO76070 VSTM2L-201ENST00000373459 831 ntTSL 3 BASIC12.82□□□□□ -0.36
SNCGO76070 TFPT-201ENST00000391757 774 ntTSL 5 BASIC12.82□□□□□ -0.36
SNCGO76070 TFPT-202ENST00000391758 804 ntAPPRIS ALT2 TSL 1 (best) BASIC12.82□□□□□ -0.36
SNCGO76070 BAD-203ENST00000394532 1157 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
SNCGO76070 FXN-202ENST00000396364 980 ntTSL 5 BASIC12.82□□□□□ -0.36
SNCGO76070 NME2-205ENST00000512737 826 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
SNCGO76070 TK2-216ENST00000564917 1156 ntTSL 3 BASIC12.82□□□□□ -0.36
SNCGO76070 LINC01356-201ENST00000401018 1819 ntTSL 2 BASIC12.82□□□□□ -0.36
SNCGO76070 GRM1-203ENST00000361719 6754 ntAPPRIS P3 TSL 5 BASIC12.82□□□□□ -0.36
SNCGO76070 KDM5B-202ENST00000367264 6449 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
SNCGO76070 OR2I1P-209ENST00000641730 5365 ntBASIC12.82□□□□□ -0.36
SNCGO76070 ISLR2-203ENST00000435464 4259 ntAPPRIS P1 TSL 2 BASIC12.82□□□□□ -0.36
SNCGO76070 ATG4B-204ENST00000402096 1685 ntTSL 2 BASIC12.82□□□□□ -0.36
SNCGO76070 B3GALT4-204ENST00000451237 1694 ntAPPRIS P1 BASIC12.82□□□□□ -0.36
SNCGO76070 FAM84B-201ENST00000304916 5404 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
SNCGO76070 RTKN-203ENST00000305557 2646 ntAPPRIS P3 TSL 5 BASIC12.82□□□□□ -0.36
SNCGO76070 NSMF-203ENST00000371472 1852 ntAPPRIS P3 TSL 2 BASIC12.82□□□□□ -0.36
SNCGO76070 AGRN-201ENST00000379370 7323 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
SNCGO76070 DIRC2-201ENST00000261038 3596 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
SNCGO76070 ZFAND2B-201ENST00000289528 1314 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
SNCGO76070 ALDH5A1-201ENST00000348925 2266 ntAPPRIS P4 TSL 1 (best) BASIC12.82□□□□□ -0.36
SNCGO76070 KCNC2-203ENST00000393288 2485 ntAPPRIS ALT2 TSL 1 (best) BASIC12.82□□□□□ -0.36
SNCGO76070 ALDH4A1-201ENST00000290597 2124 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
SNCGO76070 TSPY26P-202ENST00000565928 3884 ntBASIC12.82□□□□□ -0.36
SNCGO76070 PTGDR-201ENST00000306051 2942 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
SNCGO76070 CBWD6-201ENST00000377391 1792 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
SNCGO76070 COCH-205ENST00000475087 1997 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
SNCGO76070 FIP1L1-202ENST00000337488 2198 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
SNCGO76070 REEP3-201ENST00000373758 5205 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
SNCGO76070 POLI-202ENST00000406285 2030 ntTSL 2 BASIC12.81□□□□□ -0.36
SNCGO76070 VPS13B-204ENST00000441350 1626 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
SNCGO76070 PCP4L1-201ENST00000504449 1424 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
SNCGO76070 SLC39A13-202ENST00000362021 2296 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
SNCGO76070 ANKS3-202ENST00000446014 2265 ntTSL 5 BASIC12.81□□□□□ -0.36
SNCGO76070 CHTOP-204ENST00000368694 2096 ntAPPRIS P3 TSL 1 (best) BASIC12.81□□□□□ -0.36
SNCGO76070 CYP2U1-202ENST00000508453 3125 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
SNCGO76070 PTP4A3-202ENST00000349124 2710 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
SNCGO76070 TNXB-204ENST00000479795 2742 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
SNCGO76070 CADM3-201ENST00000368124 2546 ntAPPRIS P3 TSL 1 (best) BASIC12.81□□□□□ -0.36
SNCGO76070 FXYD3-203ENST00000435734 1467 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
SNCGO76070 UBALD1-206ENST00000590965 1462 ntTSL 2 BASIC12.81□□□□□ -0.36
SNCGO76070 KRT18P60-201ENST00000312876 1297 ntBASIC12.81□□□□□ -0.36
SNCGO76070 CLTA-206ENST00000466396 695 ntTSL 2 BASIC12.81□□□□□ -0.36
SNCGO76070 AC009511.2-201ENST00000545904 679 ntTSL 2 BASIC12.81□□□□□ -0.36
SNCGO76070 MIR4449-201ENST00000578365 66 ntBASIC12.81□□□□□ -0.36
SNCGO76070 U85056.1-201ENST00000616429 682 ntBASIC12.81□□□□□ -0.36
SNCGO76070 HNRNPUL1-222ENST00000617774 451 ntTSL 5 BASIC12.81□□□□□ -0.36
SNCGO76070 AC064853.2-201ENST00000641246 144 ntAPPRIS P1 BASIC12.81□□□□□ -0.36
SNCGO76070 XPO1-201ENST00000401558 4915 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
SNCGO76070 BACE1-211ENST00000528053 4083 ntTSL 5 BASIC12.81□□□□□ -0.36
SNCGO76070 PCDHA12-202ENST00000613593 2588 ntBASIC12.81□□□□□ -0.36
SNCGO76070 GGA2-211ENST00000567468 1713 ntTSL 2 BASIC12.81□□□□□ -0.36
SNCGO76070 ABCA7-202ENST00000433129 6704 ntAPPRIS P2 TSL 1 (best) BASIC12.81□□□□□ -0.36
SNCGO76070 CCDC62-201ENST00000253079 3546 ntAPPRIS P2 TSL 1 (best) BASIC12.81□□□□□ -0.36
SNCGO76070 MARK2-207ENST00000502399 2885 ntAPPRIS ALT2 TSL 5 BASIC12.81□□□□□ -0.36
SNCGO76070 SLC2A8-215ENST00000610552 1763 ntTSL 3 BASIC12.81□□□□□ -0.36
SNCGO76070 MAP3K9-201ENST00000381250 4025 ntAPPRIS ALT2 TSL 5 BASIC12.81□□□□□ -0.36
SNCGO76070 RNF8-202ENST00000373479 5631 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
SNCGO76070 LRCH3-207ENST00000441090 2034 ntTSL 2 BASIC12.81□□□□□ -0.36
SNCGO76070 DPF1-209ENST00000456296 1562 ntAPPRIS P1 TSL 5 BASIC12.81□□□□□ -0.36
SNCGO76070 TPR-209ENST00000613151 2478 ntTSL 5 BASIC12.81□□□□□ -0.36
SNCGO76070 FBXL17-201ENST00000359660 4510 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Retrieved 100 of 98,524 protein–RNA pairs in 54.6 ms