Protein–RNA interactions for Protein: O60245

PCDH7, Protocadherin-7, humanhuman

Predictions only

Length 1,069 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH7O60245 TWF1-201ENST00000395510 3045 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
PCDH7O60245 MAL-201ENST00000309988 1112 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
PCDH7O60245 MEN1-201ENST00000312049 2761 ntAPPRIS ALT1 TSL 1 (best) BASIC18.19■□□□□ 0.5
PCDH7O60245 MRGPRG-201ENST00000332314 870 ntAPPRIS P1 BASIC18.19■□□□□ 0.5
PCDH7O60245 CHPF-202ENST00000373891 1079 ntTSL 2 BASIC18.19■□□□□ 0.5
PCDH7O60245 TSPY23P-201ENST00000440136 739 ntBASIC18.19■□□□□ 0.5
PCDH7O60245 NME6-209ENST00000442597 757 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
PCDH7O60245 SPINK2-202ENST00000504762 659 ntAPPRIS ALT2 TSL 2 BASIC18.19■□□□□ 0.5
PCDH7O60245 DENND3-207ENST00000518347 850 ntTSL 2 BASIC18.19■□□□□ 0.5
PCDH7O60245 CLN6-206ENST00000565471 1075 ntTSL 2 BASIC18.19■□□□□ 0.5
PCDH7O60245 RPL23AP53-202ENST00000606507 370 ntTSL 3 BASIC18.19■□□□□ 0.5
PCDH7O60245 CROCCP4-202ENST00000633627 573 ntTSL 3 BASIC18.19■□□□□ 0.5
PCDH7O60245 GRAMD2B-219ENST00000544396 2822 ntTSL 2 BASIC18.19■□□□□ 0.5
PCDH7O60245 AC008878.3-201ENST00000617428 4964 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
PCDH7O60245 CARMIL2-201ENST00000334583 4687 ntAPPRIS P3 TSL 1 (best) BASIC18.19■□□□□ 0.5
PCDH7O60245 SRSF2-202ENST00000359995 1927 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
PCDH7O60245 SAMD14-203ENST00000503131 1938 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
PCDH7O60245 AC020763.4-201ENST00000623414 4170 ntBASIC18.19■□□□□ 0.5
PCDH7O60245 GDPD1-201ENST00000284116 1821 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
PCDH7O60245 SEPT8-201ENST00000296873 4394 ntAPPRIS P2 TSL 1 (best) BASIC18.19■□□□□ 0.5
PCDH7O60245 SLC29A4-202ENST00000396872 5685 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
PCDH7O60245 KRT8P41-201ENST00000533985 1514 ntBASIC18.18■□□□□ 0.5
PCDH7O60245 SYT7-209ENST00000542836 1362 ntTSL 5 BASIC18.18■□□□□ 0.5
PCDH7O60245 PLCXD1-202ENST00000381663 1863 ntAPPRIS P2 TSL 5 BASIC18.18■□□□□ 0.5
PCDH7O60245 ANXA8L1-203ENST00000613703 1874 ntTSL 2 BASIC18.18■□□□□ 0.5
PCDH7O60245 AGTR1-201ENST00000349243 2356 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
PCDH7O60245 WNK1-203ENST00000447667 1902 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
PCDH7O60245 KRT6C-201ENST00000252250 2289 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
PCDH7O60245 KRT6B-201ENST00000252252 2282 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
PCDH7O60245 TBC1D19-201ENST00000264866 2263 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
PCDH7O60245 MEPCE-202ENST00000414441 2261 ntTSL 2 BASIC18.18■□□□□ 0.5
PCDH7O60245 AC138932.1-201ENST00000534164 6830 ntBASIC18.18■□□□□ 0.5
PCDH7O60245 STRN4-202ENST00000391910 3628 ntAPPRIS ALT1 TSL 5 BASIC18.18■□□□□ 0.5
PCDH7O60245 SPATA2L-202ENST00000335360 1001 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
PCDH7O60245 CCT7-202ENST00000398422 1234 ntTSL 2 BASIC18.18■□□□□ 0.5
PCDH7O60245 AC005056.1-201ENST00000435932 532 ntTSL 4 BASIC18.18■□□□□ 0.5
PCDH7O60245 A3GALT2-201ENST00000442999 1023 ntAPPRIS P1 TSL 5 BASIC18.18■□□□□ 0.5
PCDH7O60245 AC073111.3-201ENST00000478789 635 ntAPPRIS P1 TSL 3 BASIC18.18■□□□□ 0.5
PCDH7O60245 IAH1-215ENST00000497473 1266 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
PCDH7O60245 ATP6V0E1-204ENST00000519911 718 ntTSL 2 BASIC18.18■□□□□ 0.5
PCDH7O60245 TESC-AS1-201ENST00000547006 1053 ntTSL 2 BASIC18.18■□□□□ 0.5
PCDH7O60245 KRTAP5-11-203ENST00000617152 558 ntAPPRIS ALT2 TSL 5 BASIC18.18■□□□□ 0.5
PCDH7O60245 TSPAN4-204ENST00000397404 1462 ntAPPRIS P1 TSL 5 BASIC18.18■□□□□ 0.5
PCDH7O60245 GAS2L1P1-201ENST00000420145 1480 ntBASIC18.18■□□□□ 0.5
PCDH7O60245 CARD9-202ENST00000371734 1814 ntTSL 5 BASIC18.18■□□□□ 0.5
PCDH7O60245 TMEM8B-204ENST00000439587 2150 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
PCDH7O60245 CCDC106-201ENST00000308964 1546 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
PCDH7O60245 LYSMD4-210ENST00000545021 2431 ntTSL 4 BASIC18.18■□□□□ 0.5
PCDH7O60245 ZNF213-202ENST00000416391 2996 ntAPPRIS P1 TSL 5 BASIC18.18■□□□□ 0.5
PCDH7O60245 CYP2F1-201ENST00000331105 1720 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
PCDH7O60245 WDTC1-201ENST00000319394 4819 ntAPPRIS ALT1 TSL 1 (best) BASIC18.18■□□□□ 0.5
PCDH7O60245 UMOD-201ENST00000302509 2477 ntAPPRIS P3 TSL 5 BASIC18.17■□□□□ 0.5
PCDH7O60245 CSF1-203ENST00000369801 1364 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
PCDH7O60245 ROPN1-209ENST00000495093 1376 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
PCDH7O60245 PTGIR-201ENST00000291294 2107 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
PCDH7O60245 DIO3-201ENST00000510508 2102 ntAPPRIS P1 BASIC18.17■□□□□ 0.5
PCDH7O60245 ZCCHC24-202ENST00000372336 4933 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
PCDH7O60245 USP25-204ENST00000400183 5341 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
PCDH7O60245 TMEM235-203ENST00000550981 1786 ntTSL 2 BASIC18.17■□□□□ 0.5
PCDH7O60245 AGAP4-201ENST00000311652 2715 ntAPPRIS ALT2 TSL 1 (best) BASIC18.17■□□□□ 0.5
PCDH7O60245 IL10RB-201ENST00000290200 1963 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
PCDH7O60245 CBSL-210ENST00000624934 1992 ntTSL 5 BASIC18.17■□□□□ 0.5
PCDH7O60245 EDN3-204ENST00000371028 2397 ntAPPRIS P4 TSL 5 BASIC18.17■□□□□ 0.5
PCDH7O60245 ZSWIM5-201ENST00000359600 5819 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
PCDH7O60245 UNC5D-204ENST00000420357 2966 ntTSL 5 BASIC18.17■□□□□ 0.5
PCDH7O60245 PPP1R3F-202ENST00000376188 2443 ntTSL 2 BASIC18.17■□□□□ 0.5
PCDH7O60245 TM9SF1-206ENST00000528669 2425 ntTSL 5 BASIC18.17■□□□□ 0.5
PCDH7O60245 KRT8-217ENST00000619952 2437 ntTSL 2 BASIC18.17■□□□□ 0.5
PCDH7O60245 MTFP1-202ENST00000355143 891 ntTSL 2 BASIC18.17■□□□□ 0.5
PCDH7O60245 C7orf50-201ENST00000357429 1294 ntAPPRIS P2 TSL 1 (best) BASIC18.17■□□□□ 0.5
PCDH7O60245 NIFKP9-201ENST00000419265 221 ntBASIC18.17■□□□□ 0.5
PCDH7O60245 LRRC75A-AS1-205ENST00000475953 1201 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
PCDH7O60245 Z85996.1-201ENST00000494644 937 ntBASIC18.17■□□□□ 0.5
PCDH7O60245 AL445675.2-201ENST00000620291 557 ntBASIC18.17■□□□□ 0.5
PCDH7O60245 AC093627.4-201ENST00000484550 5008 ntTSL 2 BASIC18.17■□□□□ 0.5
PCDH7O60245 CD7-206ENST00000583376 1659 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
PCDH7O60245 TMEM106C-202ENST00000429772 1515 ntAPPRIS P1 TSL 2 BASIC18.17■□□□□ 0.5
PCDH7O60245 DHRS4-204ENST00000543741 1340 ntTSL 2 BASIC18.17■□□□□ 0.5
PCDH7O60245 TCAIM-203ENST00000396078 2178 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
PCDH7O60245 PLEKHG5-207ENST00000400913 4698 ntAPPRIS P3 TSL 5 BASIC18.17■□□□□ 0.5
PCDH7O60245 RANBP10-201ENST00000317506 5341 ntAPPRIS P2 TSL 1 (best) BASIC18.17■□□□□ 0.5
PCDH7O60245 ZFC3H1-206ENST00000548100 1771 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
PCDH7O60245 NRN1-204ENST00000622188 1795 ntTSL 2 BASIC18.17■□□□□ 0.5
PCDH7O60245 RANBP10-209ENST00000630626 5305 ntAPPRIS ALT2 TSL 5 BASIC18.17■□□□□ 0.5
PCDH7O60245 ETV4-201ENST00000319349 2429 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
PCDH7O60245 RAX2-201ENST00000555633 2414 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
PCDH7O60245 CDC42EP2-201ENST00000279249 2023 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
PCDH7O60245 PRR5-ARHGAP8-201ENST00000352766 2043 ntAPPRIS P1 TSL 2 BASIC18.16■□□□□ 0.5
PCDH7O60245 WAC-205ENST00000375664 5924 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
PCDH7O60245 GALNT2-201ENST00000366672 4454 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
PCDH7O60245 UTP18-201ENST00000225298 1894 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
PCDH7O60245 TH-203ENST00000352909 1889 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
PCDH7O60245 SLC6A18-201ENST00000324642 2121 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
PCDH7O60245 RNF146-203ENST00000368314 2369 ntAPPRIS ALT1 TSL 2 BASIC18.16■□□□□ 0.5
PCDH7O60245 GABBR1-202ENST00000376977 1739 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
PCDH7O60245 RNF167-205ENST00000571816 1728 ntAPPRIS P3 TSL 5 BASIC18.16■□□□□ 0.5
PCDH7O60245 FAM98C-201ENST00000252530 1271 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
PCDH7O60245 SIVA1-201ENST00000329967 802 ntAPPRIS P2 TSL 1 (best) BASIC18.16■□□□□ 0.5
PCDH7O60245 INS-203ENST00000397262 639 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
PCDH7O60245 AP002982.1-201ENST00000492365 877 ntBASIC18.16■□□□□ 0.5
Retrieved 100 of 98,524 protein–RNA pairs in 28.9 ms