Protein–RNA interactions for Protein: A0PJX4

SHISA3, Protein shisa-3 homolog, humanhuman

Predictions only

Length 238 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHISA3A0PJX4 DKK3-201ENST00000326932 2636 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
SHISA3A0PJX4 SLC25A15-201ENST00000338625 1586 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
SHISA3A0PJX4 PDLIM7-203ENST00000359895 1567 ntAPPRIS ALT2 TSL 1 (best) BASIC16.61■□□□□ 0.25
SHISA3A0PJX4 ZNF865-201ENST00000568956 4005 ntAPPRIS P1 TSL 2 BASIC16.61■□□□□ 0.25
SHISA3A0PJX4 AP001273.2-201ENST00000638767 2993 ntAPPRIS P1 TSL 5 BASIC16.61■□□□□ 0.25
SHISA3A0PJX4 ACSM2A-201ENST00000219054 1988 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
SHISA3A0PJX4 RAB40C-203ENST00000535977 2717 ntAPPRIS P1 TSL 5 BASIC16.61■□□□□ 0.25
SHISA3A0PJX4 HACD1-201ENST00000326961 773 ntTSL 2 BASIC16.61■□□□□ 0.25
SHISA3A0PJX4 RNF5-203ENST00000375094 1168 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
SHISA3A0PJX4 MPRIP-203ENST00000395806 527 ntTSL 3 BASIC16.61■□□□□ 0.25
SHISA3A0PJX4 CCDC103-202ENST00000410006 921 ntAPPRIS P1 TSL 2 BASIC16.61■□□□□ 0.25
SHISA3A0PJX4 LINC00472-204ENST00000436803 667 ntTSL 5 BASIC16.61■□□□□ 0.25
SHISA3A0PJX4 NME1-207ENST00000480143 964 ntTSL 2 BASIC16.61■□□□□ 0.25
SHISA3A0PJX4 ANAPC11-208ENST00000572851 686 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
SHISA3A0PJX4 MIF4GD-211ENST00000580571 952 ntTSL 2 BASIC16.61■□□□□ 0.25
SHISA3A0PJX4 NTF6G-201ENST00000591094 616 ntBASIC16.61■□□□□ 0.25
SHISA3A0PJX4 PTPN6-204ENST00000456013 2389 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
SHISA3A0PJX4 CSRNP1-201ENST00000273153 3148 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
SHISA3A0PJX4 C14orf180-202ENST00000410013 2009 ntAPPRIS P3 TSL 1 (best) BASIC16.61■□□□□ 0.25
SHISA3A0PJX4 SOD2-206ENST00000452684 2045 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
SHISA3A0PJX4 MAEA-201ENST00000264750 2058 ntTSL 2 BASIC16.61■□□□□ 0.25
SHISA3A0PJX4 AC106820.2-201ENST00000563775 3264 ntBASIC16.61■□□□□ 0.25
SHISA3A0PJX4 DTD1-201ENST00000377452 1387 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
SHISA3A0PJX4 RWDD4-202ENST00000327570 2590 ntAPPRIS ALT1 TSL 3 BASIC16.61■□□□□ 0.25
SHISA3A0PJX4 TRIM15-207ENST00000376694 2214 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
SHISA3A0PJX4 AC134043.2-201ENST00000624206 2238 ntBASIC16.61■□□□□ 0.25
SHISA3A0PJX4 AC124283.5-201ENST00000624661 1809 ntBASIC16.61■□□□□ 0.25
SHISA3A0PJX4 DLG3-202ENST00000374355 5074 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
SHISA3A0PJX4 KRT8P8-201ENST00000434750 1448 ntBASIC16.61■□□□□ 0.25
SHISA3A0PJX4 UQCC3-202ENST00000531323 2288 ntAPPRIS P1 TSL 3 BASIC16.61■□□□□ 0.25
SHISA3A0PJX4 ISG20-201ENST00000306072 1856 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
SHISA3A0PJX4 SARDH-201ENST00000298628 1484 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
SHISA3A0PJX4 CDK11A-203ENST00000357760 2446 ntAPPRIS ALT1 TSL 1 (best) BASIC16.6■□□□□ 0.25
SHISA3A0PJX4 CDK11A-204ENST00000358779 2419 ntAPPRIS ALT1 TSL 1 (best) BASIC16.6■□□□□ 0.25
SHISA3A0PJX4 CDK11A-206ENST00000378638 2429 ntTSL 5 BASIC16.6■□□□□ 0.25
SHISA3A0PJX4 CDK11A-208ENST00000404249 2449 ntAPPRIS P4 TSL 1 (best) BASIC16.6■□□□□ 0.25
SHISA3A0PJX4 GABBR1-204ENST00000377016 4299 ntTSL 5 BASIC16.6■□□□□ 0.25
SHISA3A0PJX4 STAMBPL1-203ENST00000371926 2532 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
SHISA3A0PJX4 NOS3-210ENST00000484524 2537 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
SHISA3A0PJX4 RAB40C-205ENST00000539661 2609 ntAPPRIS P1 TSL 3 BASIC16.6■□□□□ 0.25
SHISA3A0PJX4 CDAN1-201ENST00000356231 4637 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
SHISA3A0PJX4 KTI12-201ENST00000371614 1714 ntAPPRIS P1 BASIC16.6■□□□□ 0.25
SHISA3A0PJX4 FBXL8-203ENST00000518148 1054 ntTSL 2 BASIC16.6■□□□□ 0.25
SHISA3A0PJX4 TRIM35-203ENST00000521253 1215 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
SHISA3A0PJX4 COX4I1-216ENST00000568794 794 ntTSL 5 BASIC16.6■□□□□ 0.25
SHISA3A0PJX4 ATRAID-208ENST00000611786 1256 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
SHISA3A0PJX4 AC011767.1-201ENST00000617410 1153 ntBASIC16.6■□□□□ 0.25
SHISA3A0PJX4 TXNRD3-205ENST00000640797 1824 ntAPPRIS ALT2 TSL 2 BASIC16.6■□□□□ 0.25
SHISA3A0PJX4 RIMBP3-201ENST00000619918 6105 ntAPPRIS P1 BASIC16.6■□□□□ 0.25
SHISA3A0PJX4 ANKRD6-201ENST00000339746 3073 ntAPPRIS ALT1 TSL 1 (best) BASIC16.6■□□□□ 0.25
SHISA3A0PJX4 XRCC3-201ENST00000352127 2563 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
SHISA3A0PJX4 CECR2-202ENST00000342247 6178 ntAPPRIS ALT2 TSL 5 BASIC16.6■□□□□ 0.25
SHISA3A0PJX4 HEMK1-206ENST00000455834 1499 ntAPPRIS P1 TSL 5 BASIC16.6■□□□□ 0.25
SHISA3A0PJX4 NARFL-201ENST00000251588 2112 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
SHISA3A0PJX4 WSCD1-209ENST00000574232 2129 ntAPPRIS P1 TSL 5 BASIC16.6■□□□□ 0.25
SHISA3A0PJX4 PNCK-201ENST00000340888 1508 ntAPPRIS P1 TSL 5 BASIC16.6■□□□□ 0.25
SHISA3A0PJX4 PNMA6E-201ENST00000445091 2192 ntAPPRIS P1 TSL 2 BASIC16.6■□□□□ 0.25
SHISA3A0PJX4 EPHX1-201ENST00000272167 1660 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
SHISA3A0PJX4 MCEMP1-201ENST00000333598 1730 ntAPPRIS P2 TSL 1 (best) BASIC16.59■□□□□ 0.25
SHISA3A0PJX4 KLC1-217ENST00000554280 2426 ntTSL 5 BASIC16.59■□□□□ 0.25
SHISA3A0PJX4 CDK10-202ENST00000353379 1798 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
SHISA3A0PJX4 TBC1D9-201ENST00000442267 5306 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
SHISA3A0PJX4 APTR-203ENST00000430801 583 ntTSL 5 BASIC16.59■□□□□ 0.25
SHISA3A0PJX4 KRT18P11-201ENST00000435214 1283 ntBASIC16.59■□□□□ 0.25
SHISA3A0PJX4 ATOX1-207ENST00000524142 749 ntAPPRIS P1 TSL 5 BASIC16.59■□□□□ 0.25
SHISA3A0PJX4 AC140479.5-201ENST00000568189 735 ntTSL 3 BASIC16.59■□□□□ 0.25
SHISA3A0PJX4 AC069236.1-201ENST00000604339 616 ntBASIC16.59■□□□□ 0.25
SHISA3A0PJX4 WWOX-218ENST00000627394 894 ntTSL 5 BASIC16.59■□□□□ 0.25
SHISA3A0PJX4 AL499627.1-201ENST00000569373 2188 ntBASIC16.59■□□□□ 0.25
SHISA3A0PJX4 AC009053.2-201ENST00000563701 2365 ntBASIC16.59■□□□□ 0.25
SHISA3A0PJX4 NPDC1-202ENST00000371601 1494 ntAPPRIS P2 TSL 1 (best) BASIC16.59■□□□□ 0.25
SHISA3A0PJX4 TMEM235-203ENST00000550981 1786 ntTSL 2 BASIC16.59■□□□□ 0.25
SHISA3A0PJX4 PYCR1-204ENST00000403172 1811 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
SHISA3A0PJX4 SDCBP-202ENST00000413219 2086 ntAPPRIS P3 TSL 2 BASIC16.58■□□□□ 0.25
SHISA3A0PJX4 AC005865.2-201ENST00000505276 2303 ntTSL 2 BASIC16.58■□□□□ 0.25
SHISA3A0PJX4 FBXL22-202ENST00000534939 2443 ntAPPRIS ALT2 TSL 3 BASIC16.58■□□□□ 0.25
SHISA3A0PJX4 TNFAIP2-201ENST00000333007 4175 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
SHISA3A0PJX4 MCU-201ENST00000357157 2874 ntTSL 1 (best) BASIC16.58■□□□□ 0.25
SHISA3A0PJX4 UNC50-201ENST00000357765 1143 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
SHISA3A0PJX4 ZNF644-203ENST00000361321 1253 ntTSL 2 BASIC16.58■□□□□ 0.24
SHISA3A0PJX4 MGST3-205ENST00000367889 1015 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
SHISA3A0PJX4 LBX2-202ENST00000377566 1186 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
SHISA3A0PJX4 CENPVL3-201ENST00000417339 864 ntAPPRIS P1 BASIC16.58■□□□□ 0.24
SHISA3A0PJX4 HES2-205ENST00000487437 968 ntTSL 3 BASIC16.58■□□□□ 0.24
SHISA3A0PJX4 BEAN1-AS1-201ENST00000564618 533 ntTSL 4 BASIC16.58■□□□□ 0.24
SHISA3A0PJX4 RARRES2P6-201ENST00000567333 442 ntBASIC16.58■□□□□ 0.24
SHISA3A0PJX4 CIRBP-246ENST00000628979 1043 ntTSL 2 BASIC16.58■□□□□ 0.24
SHISA3A0PJX4 SEMA6B-201ENST00000586582 3986 ntAPPRIS P2 TSL 1 (best) BASIC16.58■□□□□ 0.24
SHISA3A0PJX4 MAP2K2-202ENST00000394867 1471 ntTSL 5 BASIC16.58■□□□□ 0.24
SHISA3A0PJX4 C1orf210-202ENST00000523677 1478 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
SHISA3A0PJX4 TMEM175-220ENST00000515740 1514 ntTSL 3 BASIC16.58■□□□□ 0.24
SHISA3A0PJX4 CD40-201ENST00000372276 1623 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
SHISA3A0PJX4 PABPC1L-217ENST00000537323 1910 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
SHISA3A0PJX4 USP18-201ENST00000215794 2129 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
SHISA3A0PJX4 RPS6KA5-201ENST00000418736 2249 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
SHISA3A0PJX4 TRIM41-202ENST00000351937 2696 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
SHISA3A0PJX4 ZNF133-212ENST00000622607 2660 ntAPPRIS ALT2 TSL 4 BASIC16.58■□□□□ 0.24
SHISA3A0PJX4 NSFL1C-206ENST00000476071 2800 ntTSL 5 BASIC16.58■□□□□ 0.24
SHISA3A0PJX4 SKOR1-204ENST00000554240 3597 ntAPPRIS ALT2 TSL 5 BASIC16.58■□□□□ 0.24
SHISA3A0PJX4 HUNK-201ENST00000270112 7385 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Retrieved 100 of 98,524 protein–RNA pairs in 22.5 ms