Protein–RNA interactions for Protein: A0A0B4J245

TRAV12-1, T-cell receptor alpha variable 12-1 (Fragment), humanhuman

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV12-1A0A0B4J245 ULK3-217ENST00000568667 1470 ntTSL 5 BASIC13.38□□□□□ -0.27
TRAV12-1A0A0B4J245 BAZ1B-201ENST00000339594 6102 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
TRAV12-1A0A0B4J245 ANTXR1-202ENST00000409349 1384 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
TRAV12-1A0A0B4J245 KISS1-201ENST00000367194 709 ntAPPRIS P2 TSL 1 (best) BASIC13.38□□□□□ -0.27
TRAV12-1A0A0B4J245 C2orf50-202ENST00000405022 980 ntAPPRIS P1 TSL 2 BASIC13.38□□□□□ -0.27
TRAV12-1A0A0B4J245 SEC23A-213ENST00000557280 561 ntTSL 4 BASIC13.38□□□□□ -0.27
TRAV12-1A0A0B4J245 MIR4466-201ENST00000606121 54 ntBASIC13.38□□□□□ -0.27
TRAV12-1A0A0B4J245 TBP-202ENST00000392092 1903 ntAPPRIS P3 TSL 1 (best) BASIC13.38□□□□□ -0.27
TRAV12-1A0A0B4J245 HSD17B12-201ENST00000278353 2571 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
TRAV12-1A0A0B4J245 AC012317.2-201ENST00000623305 2251 ntBASIC13.38□□□□□ -0.27
TRAV12-1A0A0B4J245 KSR1-201ENST00000268763 2806 ntAPPRIS ALT2 TSL 5 BASIC13.38□□□□□ -0.27
TRAV12-1A0A0B4J245 TSPAN17-201ENST00000298564 2810 ntTSL 2 BASIC13.38□□□□□ -0.27
TRAV12-1A0A0B4J245 UBAP1-203ENST00000379186 2524 ntTSL 5 BASIC13.38□□□□□ -0.27
TRAV12-1A0A0B4J245 HOOK2-202ENST00000397668 2513 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
TRAV12-1A0A0B4J245 CTSA-201ENST00000191018 1898 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
TRAV12-1A0A0B4J245 RPL7-202ENST00000396465 1308 ntTSL 3 BASIC13.38□□□□□ -0.27
TRAV12-1A0A0B4J245 CSAD-209ENST00000453446 1774 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
TRAV12-1A0A0B4J245 TFAP4-201ENST00000204517 2215 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
TRAV12-1A0A0B4J245 IFFO1-201ENST00000336604 2686 ntAPPRIS P3 TSL 1 (best) BASIC13.37□□□□□ -0.27
TRAV12-1A0A0B4J245 CACNA2D2-201ENST00000266039 5476 ntAPPRIS ALT2 TSL 1 (best) BASIC13.37□□□□□ -0.27
TRAV12-1A0A0B4J245 MAP7-209ENST00000618822 4497 ntAPPRIS ALT2 TSL 5 BASIC13.37□□□□□ -0.27
TRAV12-1A0A0B4J245 PRKAR1B-204ENST00000406797 2553 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
TRAV12-1A0A0B4J245 SPERT-202ENST00000378966 1842 ntAPPRIS ALT2 TSL 1 (best) BASIC13.37□□□□□ -0.27
TRAV12-1A0A0B4J245 WDR88-201ENST00000355868 1718 ntAPPRIS P2 TSL 2 BASIC13.37□□□□□ -0.27
TRAV12-1A0A0B4J245 GDF5OS-201ENST00000374375 1734 ntAPPRIS P1 TSL 2 BASIC13.37□□□□□ -0.27
TRAV12-1A0A0B4J245 SOCS2-210ENST00000551556 1716 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
TRAV12-1A0A0B4J245 CCDC92-201ENST00000238156 2787 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
TRAV12-1A0A0B4J245 FOXP1-201ENST00000318779 843 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
TRAV12-1A0A0B4J245 P2RX2-204ENST00000351222 1140 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
TRAV12-1A0A0B4J245 AC092468.1-201ENST00000491321 562 ntTSL 4 BASIC13.37□□□□□ -0.27
TRAV12-1A0A0B4J245 SMIM20-201ENST00000506197 935 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
TRAV12-1A0A0B4J245 AP001972.3-201ENST00000530792 495 ntTSL 3 BASIC13.37□□□□□ -0.27
TRAV12-1A0A0B4J245 SLC7A5P1-201ENST00000568957 537 ntBASIC13.37□□□□□ -0.27
TRAV12-1A0A0B4J245 ETV4-204ENST00000545089 1628 ntTSL 2 BASIC13.37□□□□□ -0.27
TRAV12-1A0A0B4J245 TFRC-202ENST00000392396 5032 ntAPPRIS P3 TSL 1 (best) BASIC13.37□□□□□ -0.27
TRAV12-1A0A0B4J245 KIAA1324L-207ENST00000444627 3527 ntTSL 5 BASIC13.37□□□□□ -0.27
TRAV12-1A0A0B4J245 FAM135A-209ENST00000505769 4806 ntTSL 5 BASIC13.37□□□□□ -0.27
TRAV12-1A0A0B4J245 MMEL1-201ENST00000378412 2849 ntAPPRIS P1 TSL 2 BASIC13.37□□□□□ -0.27
TRAV12-1A0A0B4J245 PLEKHA2-206ENST00000521746 2127 ntTSL 5 BASIC13.37□□□□□ -0.27
TRAV12-1A0A0B4J245 WSCD1-209ENST00000574232 2129 ntAPPRIS P1 TSL 5 BASIC13.37□□□□□ -0.27
TRAV12-1A0A0B4J245 UBL3-201ENST00000380680 4384 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
TRAV12-1A0A0B4J245 NABP2-202ENST00000341463 1411 ntAPPRIS P1 TSL 3 BASIC13.37□□□□□ -0.27
TRAV12-1A0A0B4J245 TNFRSF25-203ENST00000351959 1441 ntAPPRIS ALT2 TSL 1 (best) BASIC13.37□□□□□ -0.27
TRAV12-1A0A0B4J245 PTEN-201ENST00000371953 9027 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
TRAV12-1A0A0B4J245 AC124067.4-201ENST00000519691 2379 ntBASIC13.37□□□□□ -0.27
TRAV12-1A0A0B4J245 KCNQ2-218ENST00000629676 2399 ntTSL 5 BASIC13.37□□□□□ -0.27
TRAV12-1A0A0B4J245 LINC00094-205ENST00000603928 5722 ntAPPRIS ALT2 TSL 2 BASIC13.37□□□□□ -0.27
TRAV12-1A0A0B4J245 LRRC3-201ENST00000291592 5869 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
TRAV12-1A0A0B4J245 PDE2A-226ENST00000544570 3119 ntTSL 5 BASIC13.37□□□□□ -0.27
TRAV12-1A0A0B4J245 RELL2-201ENST00000297164 2520 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
TRAV12-1A0A0B4J245 ALAS2-203ENST00000396198 1936 ntTSL 5 BASIC13.37□□□□□ -0.27
TRAV12-1A0A0B4J245 RARA-206ENST00000425707 3041 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
TRAV12-1A0A0B4J245 C21orf91-203ENST00000400559 1593 ntAPPRIS ALT1 TSL 5 BASIC13.37□□□□□ -0.27
TRAV12-1A0A0B4J245 HLA-G-205ENST00000428701 1578 ntAPPRIS P2 BASIC13.37□□□□□ -0.27
TRAV12-1A0A0B4J245 WDR41-208ENST00000507029 1553 ntTSL 2 BASIC13.37□□□□□ -0.27
TRAV12-1A0A0B4J245 FBXO27-207ENST00000600828 1557 ntAPPRIS ALT1 TSL 5 BASIC13.37□□□□□ -0.27
TRAV12-1A0A0B4J245 GGT3P-201ENST00000412448 2340 ntTSL 2 BASIC13.36□□□□□ -0.27
TRAV12-1A0A0B4J245 TRIM8-201ENST00000302424 2831 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
TRAV12-1A0A0B4J245 BCS1L-201ENST00000359273 1454 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
TRAV12-1A0A0B4J245 FEM1AP3-201ENST00000403722 1741 ntBASIC13.36□□□□□ -0.27
TRAV12-1A0A0B4J245 MTSS1-203ENST00000431961 1711 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
TRAV12-1A0A0B4J245 FADS2-209ENST00000521849 1703 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
TRAV12-1A0A0B4J245 WDR25-202ENST00000402312 1969 ntAPPRIS P1 TSL 2 BASIC13.36□□□□□ -0.27
TRAV12-1A0A0B4J245 CTSB-232ENST00000534510 1989 ntAPPRIS P1 TSL 5 BASIC13.36□□□□□ -0.27
TRAV12-1A0A0B4J245 C6orf47-202ENST00000375911 2475 ntAPPRIS P1 BASIC13.36□□□□□ -0.27
TRAV12-1A0A0B4J245 PIGZ-202ENST00000412723 2701 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
TRAV12-1A0A0B4J245 NEO1-201ENST00000261908 7088 ntAPPRIS P3 TSL 1 (best) BASIC13.36□□□□□ -0.27
TRAV12-1A0A0B4J245 PRCC-201ENST00000271526 2105 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
TRAV12-1A0A0B4J245 MTMR14-203ENST00000353332 2368 ntAPPRIS ALT2 TSL 1 (best) BASIC13.36□□□□□ -0.27
TRAV12-1A0A0B4J245 NAT9-201ENST00000357814 1875 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
TRAV12-1A0A0B4J245 TSTA3-201ENST00000425753 1362 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
TRAV12-1A0A0B4J245 AC079922.2-201ENST00000457336 2022 ntTSL 2 BASIC13.36□□□□□ -0.27
TRAV12-1A0A0B4J245 MUTYH-202ENST00000355498 1776 ntAPPRIS ALT2 TSL 1 (best) BASIC13.36□□□□□ -0.27
TRAV12-1A0A0B4J245 KCNIP4-205ENST00000382152 1767 ntTSL 5 BASIC13.36□□□□□ -0.27
TRAV12-1A0A0B4J245 UBE2E1-201ENST00000306627 1511 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
TRAV12-1A0A0B4J245 PCDHA7-202ENST00000525929 5221 ntAPPRIS P2 TSL 1 (best) BASIC13.36□□□□□ -0.27
TRAV12-1A0A0B4J245 TNFRSF25-201ENST00000348333 1119 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
TRAV12-1A0A0B4J245 TNFRSF25-202ENST00000351748 705 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
TRAV12-1A0A0B4J245 HSPE1-203ENST00000409729 478 ntTSL 2 BASIC13.36□□□□□ -0.27
TRAV12-1A0A0B4J245 RPP21-222ENST00000433076 577 ntTSL 2 BASIC13.36□□□□□ -0.27
TRAV12-1A0A0B4J245 LINC01659-202ENST00000449711 917 ntTSL 3 BASIC13.36□□□□□ -0.27
TRAV12-1A0A0B4J245 ZSWIM7-205ENST00000472495 703 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
TRAV12-1A0A0B4J245 SERTAD4-AS1-202ENST00000475406 591 ntTSL 2 BASIC13.36□□□□□ -0.27
TRAV12-1A0A0B4J245 HTATIP2-208ENST00000532505 595 ntTSL 2 BASIC13.36□□□□□ -0.27
TRAV12-1A0A0B4J245 TMC6-218ENST00000591436 1155 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
TRAV12-1A0A0B4J245 MYDGF-203ENST00000599630 713 ntTSL 2 BASIC13.36□□□□□ -0.27
TRAV12-1A0A0B4J245 LINC01881-206ENST00000614114 957 ntTSL 2 BASIC13.36□□□□□ -0.27
TRAV12-1A0A0B4J245 KLC1-217ENST00000554280 2426 ntTSL 5 BASIC13.36□□□□□ -0.27
TRAV12-1A0A0B4J245 AIFM3-203ENST00000405089 2333 ntAPPRIS ALT1 TSL 2 BASIC13.36□□□□□ -0.27
TRAV12-1A0A0B4J245 AFG3L1P-203ENST00000418696 2965 ntTSL 2 BASIC13.36□□□□□ -0.27
TRAV12-1A0A0B4J245 INPP4A-205ENST00000409851 3365 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
TRAV12-1A0A0B4J245 PHRF1-205ENST00000533464 5218 ntAPPRIS ALT2 TSL 1 (best) BASIC13.36□□□□□ -0.27
TRAV12-1A0A0B4J245 ATP1B1-202ENST00000367816 2608 ntAPPRIS P1 TSL 5 BASIC13.36□□□□□ -0.27
TRAV12-1A0A0B4J245 SSC5D-202ENST00000587166 3017 ntAPPRIS ALT2 TSL 1 (best) BASIC13.36□□□□□ -0.27
TRAV12-1A0A0B4J245 CENPH-206ENST00000515001 1305 ntTSL 2 BASIC13.36□□□□□ -0.27
TRAV12-1A0A0B4J245 ABHD14A-ACY1-202ENST00000463937 1705 ntAPPRIS ALT2 TSL 5 BASIC13.36□□□□□ -0.27
TRAV12-1A0A0B4J245 TFCP2-205ENST00000549867 1727 ntTSL 5 BASIC13.36□□□□□ -0.27
TRAV12-1A0A0B4J245 DNM1P34-201ENST00000567292 2276 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
TRAV12-1A0A0B4J245 DMD-208ENST00000378680 1858 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
TRAV12-1A0A0B4J245 YAP1-209ENST00000537274 5350 ntAPPRIS ALT2 TSL 5 BASIC13.35□□□□□ -0.27
Retrieved 100 of 98,524 protein–RNA pairs in 23.3 ms