Protein–RNA interactions for Protein: A0A0A0MS04

TRBV6-7, T-cell receptor beta variable 6-7 (non-functional) (Fragment), humanhuman

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRBV6-7A0A0A0MS04 CCNO-201ENST00000282572 1433 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
TRBV6-7A0A0A0MS04 CAV3-201ENST00000343849 1431 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
TRBV6-7A0A0A0MS04 CCNI2-201ENST00000378731 2355 ntAPPRIS P3 TSL 1 (best) BASIC15.94■□□□□ 0.14
TRBV6-7A0A0A0MS04 SNCA-203ENST00000394986 1420 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
TRBV6-7A0A0A0MS04 NTMT1-210ENST00000613644 1501 ntAPPRIS P1 TSL 3 BASIC15.94■□□□□ 0.14
TRBV6-7A0A0A0MS04 WNT6-201ENST00000233948 1703 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
TRBV6-7A0A0A0MS04 TSG101-201ENST00000251968 1824 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
TRBV6-7A0A0A0MS04 MADD-208ENST00000405573 1823 ntTSL 5 BASIC15.94■□□□□ 0.14
TRBV6-7A0A0A0MS04 SYTL1-201ENST00000318074 1900 ntTSL 2 BASIC15.94■□□□□ 0.14
TRBV6-7A0A0A0MS04 TRIM50-201ENST00000333149 2047 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
TRBV6-7A0A0A0MS04 ALG9-214ENST00000614444 2028 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
TRBV6-7A0A0A0MS04 AC067852.2-201ENST00000590513 2313 ntBASIC15.94■□□□□ 0.14
TRBV6-7A0A0A0MS04 CASR-204ENST00000638421 5088 ntAPPRIS P1 TSL 5 BASIC15.94■□□□□ 0.14
TRBV6-7A0A0A0MS04 KAT2A-201ENST00000225916 3109 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
TRBV6-7A0A0A0MS04 MED10-201ENST00000255764 1141 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
TRBV6-7A0A0A0MS04 REXO2-201ENST00000265881 1161 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
TRBV6-7A0A0A0MS04 RPS14-201ENST00000312037 711 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
TRBV6-7A0A0A0MS04 NDUFB1-201ENST00000329559 528 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
TRBV6-7A0A0A0MS04 CABP2-202ENST00000353903 789 ntAPPRIS P1 TSL 5 BASIC15.94■□□□□ 0.14
TRBV6-7A0A0A0MS04 COA6-202ENST00000366613 641 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
TRBV6-7A0A0A0MS04 SLC29A4P1-201ENST00000398760 971 ntBASIC15.94■□□□□ 0.14
TRBV6-7A0A0A0MS04 AL391244.2-201ENST00000428932 543 ntTSL 2 BASIC15.94■□□□□ 0.14
TRBV6-7A0A0A0MS04 RHEB-204ENST00000472642 900 ntTSL 3 BASIC15.94■□□□□ 0.14
TRBV6-7A0A0A0MS04 REXO2-208ENST00000539754 791 ntTSL 2 BASIC15.94■□□□□ 0.14
TRBV6-7A0A0A0MS04 MIR4758-201ENST00000577688 71 ntBASIC15.94■□□□□ 0.14
TRBV6-7A0A0A0MS04 MYC-209ENST00000641252 345 ntBASIC15.94■□□□□ 0.14
TRBV6-7A0A0A0MS04 POC1A-202ENST00000394970 1999 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
TRBV6-7A0A0A0MS04 NCK1-207ENST00000481752 1971 ntAPPRIS P1 TSL 5 BASIC15.94■□□□□ 0.14
TRBV6-7A0A0A0MS04 CFAP100-203ENST00000505024 1994 ntAPPRIS ALT2 TSL 1 (best) BASIC15.94■□□□□ 0.14
TRBV6-7A0A0A0MS04 EGFL6-201ENST00000361306 2398 ntAPPRIS P3 TSL 1 (best) BASIC15.94■□□□□ 0.14
TRBV6-7A0A0A0MS04 CDKN1B-201ENST00000228872 2657 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
TRBV6-7A0A0A0MS04 RIMKLB-202ENST00000357529 5830 ntAPPRIS P1 TSL 5 BASIC15.94■□□□□ 0.14
TRBV6-7A0A0A0MS04 TRAPPC12-201ENST00000324266 2508 ntAPPRIS P2 TSL 1 (best) BASIC15.94■□□□□ 0.14
TRBV6-7A0A0A0MS04 SH3BP2-202ENST00000435136 2318 ntAPPRIS P3 TSL 2 BASIC15.94■□□□□ 0.14
TRBV6-7A0A0A0MS04 FBXL12-205ENST00000586651 1736 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
TRBV6-7A0A0A0MS04 SLC22A18-202ENST00000347936 1542 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
TRBV6-7A0A0A0MS04 RHOB-201ENST00000272233 2372 ntAPPRIS P1 BASIC15.93■□□□□ 0.14
TRBV6-7A0A0A0MS04 NFATC1-210ENST00000587635 2195 ntTSL 1 (best) BASIC15.93■□□□□ 0.14
TRBV6-7A0A0A0MS04 LSM11-201ENST00000286307 6584 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
TRBV6-7A0A0A0MS04 SERPINA4-201ENST00000298841 1784 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
TRBV6-7A0A0A0MS04 FDFT1-209ENST00000525900 1596 ntTSL 5 BASIC15.93■□□□□ 0.14
TRBV6-7A0A0A0MS04 NAT6-204ENST00000443094 1464 ntAPPRIS ALT2 TSL 1 (best) BASIC15.93■□□□□ 0.14
TRBV6-7A0A0A0MS04 ULK3-217ENST00000568667 1470 ntTSL 5 BASIC15.93■□□□□ 0.14
TRBV6-7A0A0A0MS04 NR1D2-201ENST00000312521 5258 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
TRBV6-7A0A0A0MS04 ZNF517-201ENST00000359971 2335 ntAPPRIS P1 TSL 4 BASIC15.93■□□□□ 0.14
TRBV6-7A0A0A0MS04 PTPRJ-202ENST00000440289 3158 ntTSL 1 (best) BASIC15.93■□□□□ 0.14
TRBV6-7A0A0A0MS04 CASC2-205ENST00000454781 2216 ntTSL 1 (best) BASIC15.93■□□□□ 0.14
TRBV6-7A0A0A0MS04 HCFC1R1-202ENST00000354679 765 ntTSL 2 BASIC15.93■□□□□ 0.14
TRBV6-7A0A0A0MS04 PPP1R14BP2-201ENST00000426284 444 ntBASIC15.93■□□□□ 0.14
TRBV6-7A0A0A0MS04 GUSBP6-202ENST00000438529 1198 ntBASIC15.93■□□□□ 0.14
TRBV6-7A0A0A0MS04 AC097658.1-201ENST00000475555 843 ntBASIC15.93■□□□□ 0.14
TRBV6-7A0A0A0MS04 ZFPL1-203ENST00000525509 478 ntTSL 2 BASIC15.93■□□□□ 0.14
TRBV6-7A0A0A0MS04 PNN-205ENST00000556530 601 ntTSL 2 BASIC15.93■□□□□ 0.14
TRBV6-7A0A0A0MS04 Z97986.1-201ENST00000565879 476 ntTSL 5 BASIC15.93■□□□□ 0.14
TRBV6-7A0A0A0MS04 LITAF-205ENST00000570904 1118 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
TRBV6-7A0A0A0MS04 AC007786.1-201ENST00000587859 709 ntTSL 2 BASIC15.93■□□□□ 0.14
TRBV6-7A0A0A0MS04 TNNI3-207ENST00000588882 669 ntTSL 2 BASIC15.93■□□□□ 0.14
TRBV6-7A0A0A0MS04 BIRC8-201ENST00000426466 2026 ntAPPRIS P1 BASIC15.93■□□□□ 0.14
TRBV6-7A0A0A0MS04 AC011944.1-201ENST00000316148 1900 ntTSL 2 BASIC15.93■□□□□ 0.14
TRBV6-7A0A0A0MS04 RAP1GAP-204ENST00000374761 3318 ntTSL 5 BASIC15.93■□□□□ 0.14
TRBV6-7A0A0A0MS04 PYCR1-204ENST00000403172 1811 ntTSL 1 (best) BASIC15.93■□□□□ 0.14
TRBV6-7A0A0A0MS04 ELAC2-202ENST00000395962 2924 ntTSL 2 BASIC15.93■□□□□ 0.14
TRBV6-7A0A0A0MS04 MBIP-203ENST00000416007 1648 ntAPPRIS P3 TSL 1 (best) BASIC15.93■□□□□ 0.14
TRBV6-7A0A0A0MS04 TUBA8-201ENST00000316027 1518 ntTSL 2 BASIC15.93■□□□□ 0.14
TRBV6-7A0A0A0MS04 HSPB2-C11orf52-202ENST00000534100 1521 ntAPPRIS ALT2 TSL 2 BASIC15.93■□□□□ 0.14
TRBV6-7A0A0A0MS04 B4GALT1-202ENST00000535206 1535 ntTSL 1 (best) BASIC15.93■□□□□ 0.14
TRBV6-7A0A0A0MS04 ARNTL-205ENST00000403510 2745 ntTSL 2 BASIC15.93■□□□□ 0.14
TRBV6-7A0A0A0MS04 NOP14-AS1-202ENST00000505731 1999 ntTSL 2 BASIC15.93■□□□□ 0.14
TRBV6-7A0A0A0MS04 GTF2IP1-210ENST00000622829 3605 ntTSL 1 (best) BASIC15.93■□□□□ 0.14
TRBV6-7A0A0A0MS04 TP53BP2-202ENST00000391878 4741 ntTSL 1 (best) BASIC15.93■□□□□ 0.14
TRBV6-7A0A0A0MS04 GOSR2-210ENST00000576910 1891 ntAPPRIS ALT1 TSL 5 BASIC15.93■□□□□ 0.14
TRBV6-7A0A0A0MS04 CAPS-201ENST00000452990 1789 ntTSL 5 BASIC15.92■□□□□ 0.14
TRBV6-7A0A0A0MS04 THOC3-208ENST00000513482 1796 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
TRBV6-7A0A0A0MS04 IFFO1-202ENST00000356896 2680 ntTSL 5 BASIC15.92■□□□□ 0.14
TRBV6-7A0A0A0MS04 AP003071.5-201ENST00000641568 2695 ntAPPRIS P1 BASIC15.92■□□□□ 0.14
TRBV6-7A0A0A0MS04 AUP1-201ENST00000377526 1695 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
TRBV6-7A0A0A0MS04 NAPRT-202ENST00000426292 1654 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
TRBV6-7A0A0A0MS04 DUSP1-201ENST00000239223 2019 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
TRBV6-7A0A0A0MS04 RABEP2-202ENST00000358201 2821 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
TRBV6-7A0A0A0MS04 GLIS1-202ENST00000628545 2807 ntAPPRIS ALT2 TSL 5 BASIC15.92■□□□□ 0.14
TRBV6-7A0A0A0MS04 ABALON-201ENST00000629058 1903 ntBASIC15.92■□□□□ 0.14
TRBV6-7A0A0A0MS04 ILKAP-201ENST00000254654 1490 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
TRBV6-7A0A0A0MS04 LLGL2-203ENST00000392550 3509 ntAPPRIS P2 TSL 1 (best) BASIC15.92■□□□□ 0.14
TRBV6-7A0A0A0MS04 ALDH5A1-201ENST00000348925 2266 ntAPPRIS P4 TSL 1 (best) BASIC15.92■□□□□ 0.14
TRBV6-7A0A0A0MS04 KLHDC4-203ENST00000347925 1821 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
TRBV6-7A0A0A0MS04 UBQLN4P1-201ENST00000461599 1801 ntBASIC15.92■□□□□ 0.14
TRBV6-7A0A0A0MS04 IL15-208ENST00000529613 1355 ntAPPRIS P1 TSL 5 BASIC15.92■□□□□ 0.14
TRBV6-7A0A0A0MS04 BOD1L2-201ENST00000585477 3239 ntAPPRIS P1 BASIC15.92■□□□□ 0.14
TRBV6-7A0A0A0MS04 TMPO-201ENST00000261210 820 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
TRBV6-7A0A0A0MS04 CAVIN3-201ENST00000303927 1174 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
TRBV6-7A0A0A0MS04 OTUB1-203ENST00000428192 1296 ntAPPRIS P2 TSL 2 BASIC15.92■□□□□ 0.14
TRBV6-7A0A0A0MS04 TSPY6P-201ENST00000448518 926 ntBASIC15.92■□□□□ 0.14
TRBV6-7A0A0A0MS04 LIME1-205ENST00000480139 819 ntAPPRIS ALT2 TSL 3 BASIC15.92■□□□□ 0.14
TRBV6-7A0A0A0MS04 SLC29A4P2-201ENST00000504749 1089 ntBASIC15.92■□□□□ 0.14
TRBV6-7A0A0A0MS04 PNMA6B-201ENST00000538162 1200 ntBASIC15.92■□□□□ 0.14
TRBV6-7A0A0A0MS04 SEC23A-AS1-201ENST00000557350 500 ntTSL 3 BASIC15.92■□□□□ 0.14
TRBV6-7A0A0A0MS04 AC006435.1-201ENST00000571775 1065 ntTSL 5 BASIC15.92■□□□□ 0.14
TRBV6-7A0A0A0MS04 AC060766.5-201ENST00000590539 871 ntBASIC15.92■□□□□ 0.14
TRBV6-7A0A0A0MS04 AL121829.2-201ENST00000620908 328 ntBASIC15.92■□□□□ 0.14
TRBV6-7A0A0A0MS04 HOXD10-201ENST00000249501 1989 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
Retrieved 100 of 98,524 protein–RNA pairs in 33.4 ms