Protein–RNA interactions for Protein: Q9Y5G8

PCDHGA5, Protocadherin gamma-A5, humanhuman

Predictions only

Length 931 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA5Q9Y5G8 TMEM89-201ENST00000330862 662 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
PCDHGA5Q9Y5G8 CST3-202ENST00000398409 832 ntAPPRIS P1 TSL 3 BASIC18.79■□□□□ 0.6
PCDHGA5Q9Y5G8 GGT1-208ENST00000404920 657 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
PCDHGA5Q9Y5G8 PHGR1-201ENST00000448599 436 ntAPPRIS P1 TSL 5 BASIC18.79■□□□□ 0.6
PCDHGA5Q9Y5G8 GGTLC2-203ENST00000480559 657 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
PCDHGA5Q9Y5G8 AC106795.1-205ENST00000512851 1056 ntBASIC18.79■□□□□ 0.6
PCDHGA5Q9Y5G8 KLK12-205ENST00000529888 735 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
PCDHGA5Q9Y5G8 C12orf43-206ENST00000537817 1270 ntAPPRIS ALT2 TSL 1 (best) BASIC18.79■□□□□ 0.6
PCDHGA5Q9Y5G8 TYROBP-209ENST00000589517 415 ntAPPRIS ALT1 TSL 1 (best) BASIC18.79■□□□□ 0.6
PCDHGA5Q9Y5G8 TMIGD2-202ENST00000595645 1212 ntAPPRIS ALT2 TSL 1 (best) BASIC18.79■□□□□ 0.6
PCDHGA5Q9Y5G8 AL162741.1-201ENST00000565563 1558 ntBASIC18.79■□□□□ 0.6
PCDHGA5Q9Y5G8 IL11RA-201ENST00000318041 1728 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
PCDHGA5Q9Y5G8 PILRB-207ENST00000448382 2314 ntTSL 2 BASIC18.79■□□□□ 0.6
PCDHGA5Q9Y5G8 SEC61A2-205ENST00000379033 2462 ntTSL 2 BASIC18.79■□□□□ 0.6
PCDHGA5Q9Y5G8 STK16-201ENST00000396738 1673 ntAPPRIS P1 TSL 2 BASIC18.79■□□□□ 0.6
PCDHGA5Q9Y5G8 KLHDC1-201ENST00000359332 2691 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
PCDHGA5Q9Y5G8 WNT10A-201ENST00000258411 2547 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
PCDHGA5Q9Y5G8 FLVCR1-201ENST00000366971 5939 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
PCDHGA5Q9Y5G8 NSDHL-201ENST00000370274 1929 ntAPPRIS P2 TSL 1 (best) BASIC18.78■□□□□ 0.6
PCDHGA5Q9Y5G8 MICU2-201ENST00000382374 1920 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
PCDHGA5Q9Y5G8 PEX16-210ENST00000532681 1639 ntTSL 3 BASIC18.78■□□□□ 0.6
PCDHGA5Q9Y5G8 TBC1D3P2-202ENST00000577902 1649 ntBASIC18.78■□□□□ 0.6
PCDHGA5Q9Y5G8 RASSF7-205ENST00000454668 1450 ntAPPRIS ALT2 TSL 1 (best) BASIC18.78■□□□□ 0.6
PCDHGA5Q9Y5G8 AP000662.2-202ENST00000530595 2790 ntTSL 2 BASIC18.78■□□□□ 0.6
PCDHGA5Q9Y5G8 RAP1B-204ENST00000393436 2049 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
PCDHGA5Q9Y5G8 CDC42BPB-201ENST00000361246 6758 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
PCDHGA5Q9Y5G8 CFAP97-205ENST00000514798 2895 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
PCDHGA5Q9Y5G8 CNPY2-201ENST00000273308 1214 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
PCDHGA5Q9Y5G8 MAL-203ENST00000353004 873 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
PCDHGA5Q9Y5G8 DRAXINP1-201ENST00000437611 948 ntBASIC18.78■□□□□ 0.6
PCDHGA5Q9Y5G8 NTMT1-205ENST00000459968 1123 ntTSL 2 BASIC18.78■□□□□ 0.6
PCDHGA5Q9Y5G8 NTMT1-207ENST00000482347 1072 ntTSL 2 BASIC18.78■□□□□ 0.6
PCDHGA5Q9Y5G8 AC079031.1-201ENST00000542627 1035 ntTSL 3 BASIC18.78■□□□□ 0.6
PCDHGA5Q9Y5G8 AL662844.1-201ENST00000546340 181 ntBASIC18.78■□□□□ 0.6
PCDHGA5Q9Y5G8 LINC01582-202ENST00000561215 452 ntTSL 4 BASIC18.78■□□□□ 0.6
PCDHGA5Q9Y5G8 ZFPM1-205ENST00000569086 563 ntTSL 2 BASIC18.78■□□□□ 0.6
PCDHGA5Q9Y5G8 DEF8-228ENST00000610455 816 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
PCDHGA5Q9Y5G8 AL121832.1-201ENST00000615180 677 ntTSL 3 BASIC18.78■□□□□ 0.6
PCDHGA5Q9Y5G8 SPEG-225ENST00000617028 815 ntTSL 5 BASIC18.78■□□□□ 0.6
PCDHGA5Q9Y5G8 CXorf40A-208ENST00000434353 1524 ntAPPRIS ALT1 TSL 5 BASIC18.78■□□□□ 0.6
PCDHGA5Q9Y5G8 ZNF668-209ENST00000539836 2469 ntTSL 5 BASIC18.78■□□□□ 0.6
PCDHGA5Q9Y5G8 MRPL3-201ENST00000264995 1706 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
PCDHGA5Q9Y5G8 SRSF1-208ENST00000584773 1317 ntTSL 5 BASIC18.77■□□□□ 0.6
PCDHGA5Q9Y5G8 NOS3-204ENST00000467517 2377 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
PCDHGA5Q9Y5G8 FEM1AP1-201ENST00000431297 1995 ntBASIC18.77■□□□□ 0.6
PCDHGA5Q9Y5G8 RHBDL1-201ENST00000219551 1560 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
PCDHGA5Q9Y5G8 ATP6AP1-201ENST00000369762 2099 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
PCDHGA5Q9Y5G8 PTX4-201ENST00000293922 1422 ntAPPRIS P2 TSL 1 (best) BASIC18.77■□□□□ 0.6
PCDHGA5Q9Y5G8 FBXW9-203ENST00000587955 1437 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
PCDHGA5Q9Y5G8 GNB3-201ENST00000229264 1923 ntAPPRIS P3 TSL 5 BASIC18.77■□□□□ 0.6
PCDHGA5Q9Y5G8 EMC8-202ENST00000435200 1935 ntTSL 2 BASIC18.77■□□□□ 0.6
PCDHGA5Q9Y5G8 SMG8-203ENST00000578922 2178 ntBASIC18.77■□□□□ 0.6
PCDHGA5Q9Y5G8 PLEKHG4-201ENST00000360461 6782 ntAPPRIS P3 TSL 2 BASIC18.77■□□□□ 0.6
PCDHGA5Q9Y5G8 CPEB1-218ENST00000620182 2422 ntTSL 2 BASIC18.77■□□□□ 0.6
PCDHGA5Q9Y5G8 AC004975.2-201ENST00000442017 565 ntTSL 5 BASIC18.77■□□□□ 0.6
PCDHGA5Q9Y5G8 AC113382.1-201ENST00000500267 1253 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
PCDHGA5Q9Y5G8 TRAF3IP2-AS1-208ENST00000525151 609 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
PCDHGA5Q9Y5G8 MPI-205ENST00000562606 1052 ntTSL 3 BASIC18.77■□□□□ 0.6
PCDHGA5Q9Y5G8 NAA38-203ENST00000575071 553 ntTSL 2 BASIC18.77■□□□□ 0.6
PCDHGA5Q9Y5G8 WDR6-223ENST00000627177 207 ntTSL 2 BASIC18.77■□□□□ 0.6
PCDHGA5Q9Y5G8 PER3-203ENST00000377541 1524 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
PCDHGA5Q9Y5G8 AC140125.2-201ENST00000502515 1517 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
PCDHGA5Q9Y5G8 STRADB-201ENST00000194530 2293 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
PCDHGA5Q9Y5G8 CRYBB2P1-202ENST00000382734 1364 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
PCDHGA5Q9Y5G8 CLK3-202ENST00000395066 2621 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
PCDHGA5Q9Y5G8 MARK3-206ENST00000440884 2643 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
PCDHGA5Q9Y5G8 PLD6-201ENST00000321560 2560 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.59
PCDHGA5Q9Y5G8 SSBP3-216ENST00000610401 3168 ntTSL 5 BASIC18.77■□□□□ 0.59
PCDHGA5Q9Y5G8 CKMT1A-202ENST00000413453 1911 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
PCDHGA5Q9Y5G8 EXOC3L2-202ENST00000413988 2964 ntAPPRIS P1 TSL 5 BASIC18.76■□□□□ 0.59
PCDHGA5Q9Y5G8 SMG1P5-201ENST00000411546 2362 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
PCDHGA5Q9Y5G8 CFC1-203ENST00000621673 1444 ntTSL 2 BASIC18.76■□□□□ 0.59
PCDHGA5Q9Y5G8 L3HYPDH-201ENST00000247194 1527 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
PCDHGA5Q9Y5G8 ANKRD18DP-204ENST00000455355 1975 ntBASIC18.76■□□□□ 0.59
PCDHGA5Q9Y5G8 VEGFA-222ENST00000520948 1199 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
PCDHGA5Q9Y5G8 CLDN7-204ENST00000571881 735 ntTSL 3 BASIC18.76■□□□□ 0.59
PCDHGA5Q9Y5G8 GNAS-AS1-203ENST00000598163 548 ntTSL 4 BASIC18.76■□□□□ 0.59
PCDHGA5Q9Y5G8 AL732292.2-201ENST00000609649 430 ntBASIC18.76■□□□□ 0.59
PCDHGA5Q9Y5G8 ISG15-203ENST00000624697 788 ntAPPRIS ALT2 TSL 3 BASIC18.76■□□□□ 0.59
PCDHGA5Q9Y5G8 PML-204ENST00000359928 1726 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
PCDHGA5Q9Y5G8 GPR42-201ENST00000454971 1804 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
PCDHGA5Q9Y5G8 ERLEC1-202ENST00000378239 2271 ntAPPRIS ALT2 TSL 1 (best) BASIC18.76■□□□□ 0.59
PCDHGA5Q9Y5G8 GTF2IRD2B-208ENST00000619142 1932 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
PCDHGA5Q9Y5G8 FBXO25-202ENST00000350302 2229 ntAPPRIS ALT1 TSL 1 (best) BASIC18.76■□□□□ 0.59
PCDHGA5Q9Y5G8 CCDC189-206ENST00000543610 1967 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
PCDHGA5Q9Y5G8 C1QL4-201ENST00000334221 2071 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
PCDHGA5Q9Y5G8 AGAP2-AS1-201ENST00000542466 1500 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
PCDHGA5Q9Y5G8 CTU2-210ENST00000567949 1905 ntAPPRIS ALT2 TSL 1 (best) BASIC18.75■□□□□ 0.59
PCDHGA5Q9Y5G8 GPR35-202ENST00000403859 2032 ntAPPRIS P3 TSL 2 BASIC18.75■□□□□ 0.59
PCDHGA5Q9Y5G8 HLA-F-217ENST00000334668 1283 ntAPPRIS ALT2 BASIC18.75■□□□□ 0.59
PCDHGA5Q9Y5G8 CKLF-202ENST00000345436 571 ntAPPRIS ALT2 TSL 1 (best) BASIC18.75■□□□□ 0.59
PCDHGA5Q9Y5G8 TSPY8-203ENST00000383005 435 ntTSL 5 BASIC18.75■□□□□ 0.59
PCDHGA5Q9Y5G8 C7orf50-203ENST00000397100 1264 ntAPPRIS P2 TSL 3 BASIC18.75■□□□□ 0.59
PCDHGA5Q9Y5G8 CT47A4-201ENST00000415858 1298 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
PCDHGA5Q9Y5G8 CT47A9-201ENST00000417256 1298 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
PCDHGA5Q9Y5G8 CT47A6-201ENST00000419194 1298 ntAPPRIS P1 TSL 5 BASIC18.75■□□□□ 0.59
PCDHGA5Q9Y5G8 DNAJC27-AS1-204ENST00000428614 780 ntTSL 3 BASIC18.75■□□□□ 0.59
PCDHGA5Q9Y5G8 CT47A10-201ENST00000430448 1298 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
PCDHGA5Q9Y5G8 LINC01237-203ENST00000430555 843 ntTSL 4 BASIC18.75■□□□□ 0.59
PCDHGA5Q9Y5G8 HLA-F-220ENST00000434407 884 ntBASIC18.75■□□□□ 0.59
Retrieved 100 of 98,524 protein–RNA pairs in 20.3 ms