Protein–RNA interactions for Protein: Q9UN70

PCDHGC3, Protocadherin gamma-C3, humanhuman

Predictions only

Length 934 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGC3Q9UN70 C9orf129-201ENST00000375419 1154 ntAPPRIS P1 TSL 5 BASIC20.15■□□□□ 0.82
PCDHGC3Q9UN70 AL390728.5-201ENST00000428687 706 ntTSL 3 BASIC20.15■□□□□ 0.82
PCDHGC3Q9UN70 BCL7B-206ENST00000455335 985 ntTSL 3 BASIC20.15■□□□□ 0.82
PCDHGC3Q9UN70 AC008771.1-201ENST00000508000 1151 ntTSL 2 BASIC20.15■□□□□ 0.82
PCDHGC3Q9UN70 AC004803.1-203ENST00000539259 501 ntTSL 2 BASIC20.15■□□□□ 0.82
PCDHGC3Q9UN70 AC096733.2-201ENST00000609937 1394 ntBASIC20.15■□□□□ 0.82
PCDHGC3Q9UN70 MGAT5B-201ENST00000301618 4486 ntAPPRIS P3 TSL 5 BASIC20.15■□□□□ 0.82
PCDHGC3Q9UN70 TMPRSS5-209ENST00000544634 1524 ntTSL 2 BASIC20.15■□□□□ 0.82
PCDHGC3Q9UN70 CTDP1-208ENST00000613122 5866 ntAPPRIS P3 TSL 1 (best) BASIC20.15■□□□□ 0.82
PCDHGC3Q9UN70 MYC-201ENST00000259523 2042 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
PCDHGC3Q9UN70 KRT9-201ENST00000246662 2290 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
PCDHGC3Q9UN70 BICRA-204ENST00000614245 5697 ntAPPRIS ALT2 TSL 5 BASIC20.14■□□□□ 0.82
PCDHGC3Q9UN70 PFN2-203ENST00000452853 1780 ntAPPRIS ALT1 TSL 1 (best) BASIC20.14■□□□□ 0.81
PCDHGC3Q9UN70 DLGAP4-204ENST00000373913 5056 ntAPPRIS P4 TSL 1 (best) BASIC20.14■□□□□ 0.81
PCDHGC3Q9UN70 CCDC106-201ENST00000308964 1546 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
PCDHGC3Q9UN70 RAC3-201ENST00000306897 1090 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
PCDHGC3Q9UN70 ANKRD10-202ENST00000310847 1193 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
PCDHGC3Q9UN70 FAM26F-202ENST00000368605 1117 ntAPPRIS P1 TSL 5 BASIC20.14■□□□□ 0.81
PCDHGC3Q9UN70 TMSB4X-201ENST00000380633 495 ntAPPRIS P1 TSL 3 BASIC20.14■□□□□ 0.81
PCDHGC3Q9UN70 AL355355.2-201ENST00000442321 338 ntBASIC20.14■□□□□ 0.81
PCDHGC3Q9UN70 AC003005.1-201ENST00000601674 582 ntAPPRIS P5 TSL 2 BASIC20.14■□□□□ 0.81
PCDHGC3Q9UN70 SMAD7-201ENST00000262158 3087 ntAPPRIS P3 TSL 1 (best) BASIC20.14■□□□□ 0.81
PCDHGC3Q9UN70 KSR1-205ENST00000509603 2731 ntAPPRIS ALT2 TSL 5 BASIC20.14■□□□□ 0.81
PCDHGC3Q9UN70 RELB-201ENST00000221452 2294 ntAPPRIS P2 TSL 1 (best) BASIC20.14■□□□□ 0.81
PCDHGC3Q9UN70 MOXD1-203ENST00000392401 2191 ntTSL 4 BASIC20.14■□□□□ 0.81
PCDHGC3Q9UN70 PCGF6-201ENST00000337211 1950 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
PCDHGC3Q9UN70 NAT16-201ENST00000300303 2935 ntAPPRIS P2 TSL 2 BASIC20.13■□□□□ 0.81
PCDHGC3Q9UN70 RBFOX1-204ENST00000422070 1684 ntTSL 2 BASIC20.13■□□□□ 0.81
PCDHGC3Q9UN70 MYBL2-202ENST00000396863 2704 ntTSL 2 BASIC20.13■□□□□ 0.81
PCDHGC3Q9UN70 P2RY2-201ENST00000311131 2660 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
PCDHGC3Q9UN70 TMEM8A-204ENST00000431232 3691 ntAPPRIS P2 TSL 1 (best) BASIC20.13■□□□□ 0.81
PCDHGC3Q9UN70 KRT17-205ENST00000540235 1438 ntTSL 5 BASIC20.13■□□□□ 0.81
PCDHGC3Q9UN70 GALNT8-202ENST00000433855 5977 ntTSL 2 BASIC20.13■□□□□ 0.81
PCDHGC3Q9UN70 NFATC4-220ENST00000555393 2235 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
PCDHGC3Q9UN70 PIN1-201ENST00000247970 997 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
PCDHGC3Q9UN70 PSMB5-205ENST00000493471 1117 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
PCDHGC3Q9UN70 TGIF1-219ENST00000551541 990 ntTSL 2 BASIC20.13■□□□□ 0.81
PCDHGC3Q9UN70 TNFRSF12A-206ENST00000575124 1133 ntTSL 2 BASIC20.13■□□□□ 0.81
PCDHGC3Q9UN70 DECR2-212ENST00000627716 352 ntTSL 2 BASIC20.13■□□□□ 0.81
PCDHGC3Q9UN70 OCSTAMP-201ENST00000279028 2043 ntAPPRIS P1 TSL 5 BASIC20.13■□□□□ 0.81
PCDHGC3Q9UN70 GRK2-201ENST00000308595 3466 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
PCDHGC3Q9UN70 CROCCP3-202ENST00000420820 1947 ntBASIC20.13■□□□□ 0.81
PCDHGC3Q9UN70 CEP55-201ENST00000371485 2638 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
PCDHGC3Q9UN70 CERS4-201ENST00000251363 1797 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
PCDHGC3Q9UN70 ABHD14B-202ENST00000361143 1636 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
PCDHGC3Q9UN70 PSRC1-202ENST00000369904 1584 ntAPPRIS ALT2 TSL 1 (best) BASIC20.12■□□□□ 0.81
PCDHGC3Q9UN70 CD72-201ENST00000259633 1548 ntAPPRIS P2 TSL 1 (best) BASIC20.12■□□□□ 0.81
PCDHGC3Q9UN70 TINAGL1-202ENST00000457433 2140 ntAPPRIS ALT2 TSL 2 BASIC20.12■□□□□ 0.81
PCDHGC3Q9UN70 RELA-202ENST00000406246 2700 ntAPPRIS P3 TSL 1 (best) BASIC20.12■□□□□ 0.81
PCDHGC3Q9UN70 ZNF394-203ENST00000426306 2017 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
PCDHGC3Q9UN70 PIGH-201ENST00000216452 1420 ntAPPRIS P2 TSL 1 (best) BASIC20.12■□□□□ 0.81
PCDHGC3Q9UN70 ITPKB-202ENST00000366784 3146 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
PCDHGC3Q9UN70 NDRG2-227ENST00000554143 1980 ntAPPRIS ALT1 TSL 2 BASIC20.12■□□□□ 0.81
PCDHGC3Q9UN70 CTBP2-214ENST00000531469 1918 ntAPPRIS P1 TSL 2 BASIC20.12■□□□□ 0.81
PCDHGC3Q9UN70 DMD-208ENST00000378680 1858 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
PCDHGC3Q9UN70 SMURF1-202ENST00000361368 5581 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
PCDHGC3Q9UN70 GDPD1-201ENST00000284116 1821 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
PCDHGC3Q9UN70 TMEM53-202ENST00000372237 2310 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
PCDHGC3Q9UN70 SYNE4-202ENST00000340477 1004 ntAPPRIS ALT2 TSL 1 (best) BASIC20.12■□□□□ 0.81
PCDHGC3Q9UN70 FUOM-203ENST00000368552 762 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
PCDHGC3Q9UN70 C5orf49-202ENST00000509627 1020 ntAPPRIS ALT2 TSL 1 (best) BASIC20.12■□□□□ 0.81
PCDHGC3Q9UN70 IMPA2-208ENST00000589238 923 ntTSL 3 BASIC20.12■□□□□ 0.81
PCDHGC3Q9UN70 PRKACA-209ENST00000590853 1101 ntTSL 5 BASIC20.12■□□□□ 0.81
PCDHGC3Q9UN70 OAZ1-211ENST00000602676 1148 ntAPPRIS P3 TSL 5 BASIC20.12■□□□□ 0.81
PCDHGC3Q9UN70 ZNF554-201ENST00000317243 2736 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
PCDHGC3Q9UN70 WNT6-201ENST00000233948 1703 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
PCDHGC3Q9UN70 CD7-206ENST00000583376 1659 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
PCDHGC3Q9UN70 HIC1-201ENST00000322941 3053 ntAPPRIS P1 TSL 5 BASIC20.12■□□□□ 0.81
PCDHGC3Q9UN70 DHRSX-201ENST00000334651 2571 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
PCDHGC3Q9UN70 ARRDC2-201ENST00000222250 2503 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
PCDHGC3Q9UN70 UTP18-201ENST00000225298 1894 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
PCDHGC3Q9UN70 FGFR2-204ENST00000356226 3547 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
PCDHGC3Q9UN70 KRT8P3-201ENST00000519669 1449 ntBASIC20.11■□□□□ 0.81
PCDHGC3Q9UN70 RNF165-205ENST00000588679 2904 ntBASIC20.11■□□□□ 0.81
PCDHGC3Q9UN70 PTGIR-201ENST00000291294 2107 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
PCDHGC3Q9UN70 BCR-202ENST00000359540 4708 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
PCDHGC3Q9UN70 SLC6A7-203ENST00000524041 2431 ntTSL 5 BASIC20.11■□□□□ 0.81
PCDHGC3Q9UN70 GOSR2-226ENST00000639287 2367 ntTSL 5 BASIC20.11■□□□□ 0.81
PCDHGC3Q9UN70 RHOG-202ENST00000396978 1066 ntAPPRIS P1 TSL 3 BASIC20.11■□□□□ 0.81
PCDHGC3Q9UN70 AC004080.6-201ENST00000467897 919 ntTSL 5 BASIC20.11■□□□□ 0.81
PCDHGC3Q9UN70 AC003982.1-201ENST00000477404 484 ntTSL 2 BASIC20.11■□□□□ 0.81
PCDHGC3Q9UN70 AC117500.4-201ENST00000542797 617 ntTSL 3 BASIC20.11■□□□□ 0.81
PCDHGC3Q9UN70 AP003071.4-201ENST00000562276 1284 ntBASIC20.11■□□□□ 0.81
PCDHGC3Q9UN70 TYROBP-209ENST00000589517 415 ntAPPRIS ALT1 TSL 1 (best) BASIC20.11■□□□□ 0.81
PCDHGC3Q9UN70 ASRGL1-211ENST00000628829 1161 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
PCDHGC3Q9UN70 AC083906.6-201ENST00000641366 219 ntBASIC20.11■□□□□ 0.81
PCDHGC3Q9UN70 SEMA3D-202ENST00000444867 1605 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
PCDHGC3Q9UN70 LRRC23-201ENST00000007969 1615 ntAPPRIS P4 TSL 1 (best) BASIC20.11■□□□□ 0.81
PCDHGC3Q9UN70 PARS2-201ENST00000371279 2347 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
PCDHGC3Q9UN70 PDP1-208ENST00000520728 2554 ntAPPRIS P3 TSL 1 (best) BASIC20.11■□□□□ 0.81
PCDHGC3Q9UN70 ARHGAP5-203ENST00000396582 5786 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
PCDHGC3Q9UN70 CRYZL1-203ENST00000381540 1482 ntTSL 2 BASIC20.11■□□□□ 0.81
PCDHGC3Q9UN70 SELENOF-207ENST00000611507 1785 ntTSL 5 BASIC20.11■□□□□ 0.81
PCDHGC3Q9UN70 PRRT1-202ENST00000375150 1726 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
PCDHGC3Q9UN70 JAKMIP1-208ENST00000637373 1362 ntTSL 5 BASIC20.1■□□□□ 0.81
PCDHGC3Q9UN70 KCNC3-203ENST00000477616 3176 ntAPPRIS P2 TSL 1 (best) BASIC20.1■□□□□ 0.81
PCDHGC3Q9UN70 SMIM10L2A-201ENST00000417443 5230 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
PCDHGC3Q9UN70 PANK1-201ENST00000307534 6976 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
PCDHGC3Q9UN70 EGFR-202ENST00000342916 2239 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
PCDHGC3Q9UN70 TMEM235-202ENST00000421688 2490 ntAPPRIS P1 TSL 5 BASIC20.1■□□□□ 0.81
Retrieved 100 of 98,524 protein–RNA pairs in 17.9 ms