Protein–RNA interactions for Protein: Q9BXY4

RSPO3, R-spondin-3, humanhuman

Predicted RBP Predictions only

Length 272 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RSPO3Q9BXY4 WNT10B-201ENST00000301061 2274 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
RSPO3Q9BXY4 DCAF4-201ENST00000353777 1940 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
RSPO3Q9BXY4 B4GALT4-202ENST00000393765 2459 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
RSPO3Q9BXY4 SERGEF-201ENST00000265965 1566 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
RSPO3Q9BXY4 HDAC11-221ENST00000522202 1559 ntAPPRIS ALT2 TSL 2 BASIC17.55■□□□□ 0.4
RSPO3Q9BXY4 HOMEZ-201ENST00000357460 4971 ntAPPRIS P2 TSL 1 (best) BASIC17.55■□□□□ 0.4
RSPO3Q9BXY4 PRSS57-201ENST00000329267 1025 ntAPPRIS ALT2 TSL 1 (best) BASIC17.55■□□□□ 0.4
RSPO3Q9BXY4 KRASP1-201ENST00000407852 552 ntBASIC17.55■□□□□ 0.4
RSPO3Q9BXY4 POU5F1P3-201ENST00000428824 1078 ntBASIC17.55■□□□□ 0.4
RSPO3Q9BXY4 KRBOX1-AS1-201ENST00000447834 2134 ntTSL 2 BASIC17.55■□□□□ 0.4
RSPO3Q9BXY4 CCKBR-203ENST00000525462 2138 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
RSPO3Q9BXY4 PRKY-204ENST00000533551 1019 ntBASIC17.55■□□□□ 0.4
RSPO3Q9BXY4 MIR381HG-201ENST00000553692 425 ntTSL 3 BASIC17.55■□□□□ 0.4
RSPO3Q9BXY4 BCL2L10-202ENST00000561198 825 ntAPPRIS ALT2 TSL 1 (best) BASIC17.55■□□□□ 0.4
RSPO3Q9BXY4 AC006504.5-207ENST00000586220 487 ntTSL 2 BASIC17.55■□□□□ 0.4
RSPO3Q9BXY4 FBXO17-202ENST00000595329 1299 ntAPPRIS P1 TSL 2 BASIC17.55■□□□□ 0.4
RSPO3Q9BXY4 AC124016.1-201ENST00000609552 612 ntBASIC17.55■□□□□ 0.4
RSPO3Q9BXY4 PRSS57-202ENST00000613411 1090 ntAPPRIS P3 TSL 1 (best) BASIC17.55■□□□□ 0.4
RSPO3Q9BXY4 CLEC10A-201ENST00000254868 1797 ntAPPRIS P3 TSL 1 (best) BASIC17.55■□□□□ 0.4
RSPO3Q9BXY4 KANSL1L-203ENST00000418791 3562 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
RSPO3Q9BXY4 MPZ-206ENST00000533357 1955 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
RSPO3Q9BXY4 CBS-203ENST00000398158 2453 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
RSPO3Q9BXY4 CBSL-206ENST00000624406 2453 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
RSPO3Q9BXY4 PTPRM-211ENST00000580170 5941 ntAPPRIS ALT2 TSL 1 (best) BASIC17.54■□□□□ 0.4
RSPO3Q9BXY4 TP53I3-202ENST00000335934 1635 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
RSPO3Q9BXY4 PDE6B-202ENST00000429163 2120 ntTSL 2 BASIC17.54■□□□□ 0.4
RSPO3Q9BXY4 RFC2-213ENST00000621097 1635 ntTSL 5 BASIC17.54■□□□□ 0.4
RSPO3Q9BXY4 AC020922.1-201ENST00000591954 3058 ntAPPRIS P1 TSL 5 BASIC17.54■□□□□ 0.4
RSPO3Q9BXY4 LINC00461-203ENST00000504246 2300 ntTSL 2 BASIC17.54■□□□□ 0.4
RSPO3Q9BXY4 ZNF692-204ENST00000451251 2065 ntAPPRIS ALT2 TSL 2 BASIC17.54■□□□□ 0.4
RSPO3Q9BXY4 ZNF395-211ENST00000523202 2068 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
RSPO3Q9BXY4 AP5S1-203ENST00000379573 1848 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
RSPO3Q9BXY4 COMP-202ENST00000425807 2292 ntTSL 2 BASIC17.54■□□□□ 0.4
RSPO3Q9BXY4 SLC35E4-201ENST00000343605 2714 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
RSPO3Q9BXY4 MFSD10-202ENST00000355443 1753 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
RSPO3Q9BXY4 CHRAC1-201ENST00000220913 2488 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
RSPO3Q9BXY4 EWSR1-207ENST00000406548 2207 ntAPPRIS ALT2 TSL 1 (best) BASIC17.54■□□□□ 0.4
RSPO3Q9BXY4 FAM213B-202ENST00000378425 2665 ntAPPRIS ALT2 TSL 2 BASIC17.54■□□□□ 0.4
RSPO3Q9BXY4 ESRRAP1-201ENST00000400596 1257 ntBASIC17.54■□□□□ 0.4
RSPO3Q9BXY4 KRT17P3-201ENST00000420566 1262 ntBASIC17.54■□□□□ 0.4
RSPO3Q9BXY4 TSPY21P-201ENST00000433481 731 ntBASIC17.54■□□□□ 0.4
RSPO3Q9BXY4 LRRC75A-AS1-205ENST00000475953 1201 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
RSPO3Q9BXY4 ARF3-208ENST00000541959 807 ntAPPRIS P1 TSL 5 BASIC17.54■□□□□ 0.4
RSPO3Q9BXY4 TBCB-214ENST00000629269 413 ntTSL 5 BASIC17.54■□□□□ 0.4
RSPO3Q9BXY4 MTSS1-203ENST00000431961 1711 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
RSPO3Q9BXY4 HBEGF-201ENST00000230990 2386 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
RSPO3Q9BXY4 ANKS3-230ENST00000614075 2387 ntAPPRIS P1 TSL 5 BASIC17.54■□□□□ 0.4
RSPO3Q9BXY4 CPZ-201ENST00000315782 2136 ntAPPRIS P3 TSL 1 (best) BASIC17.54■□□□□ 0.4
RSPO3Q9BXY4 NAF1-202ENST00000422287 1604 ntAPPRIS ALT2 TSL 1 (best) BASIC17.54■□□□□ 0.4
RSPO3Q9BXY4 PJA1-202ENST00000374571 2672 ntAPPRIS ALT2 TSL 1 (best) BASIC17.54■□□□□ 0.4
RSPO3Q9BXY4 CTSD-212ENST00000637815 2003 ntAPPRIS ALT2 TSL 5 BASIC17.54■□□□□ 0.4
RSPO3Q9BXY4 ACSF2-201ENST00000300441 2235 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
RSPO3Q9BXY4 MTSS1L-204ENST00000616026 2241 ntAPPRIS ALT2 TSL 5 BASIC17.53■□□□□ 0.4
RSPO3Q9BXY4 RAB11FIP5-201ENST00000258098 4342 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
RSPO3Q9BXY4 MFSD1-201ENST00000264266 1594 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
RSPO3Q9BXY4 FMR1-207ENST00000439526 3699 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
RSPO3Q9BXY4 GNG4-203ENST00000391854 5104 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
RSPO3Q9BXY4 SERPINA4-201ENST00000298841 1784 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
RSPO3Q9BXY4 GUCY1A2-201ENST00000282249 3047 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
RSPO3Q9BXY4 RELL2-202ENST00000444782 2154 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
RSPO3Q9BXY4 GABBR1-202ENST00000376977 1739 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
RSPO3Q9BXY4 ST3GAL4-203ENST00000392669 1724 ntAPPRIS ALT1 TSL 1 (best) BASIC17.53■□□□□ 0.4
RSPO3Q9BXY4 ISM2-207ENST00000493585 1739 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
RSPO3Q9BXY4 COBL-210ENST00000632460 1941 ntTSL 5 BASIC17.53■□□□□ 0.4
RSPO3Q9BXY4 MCHR1-202ENST00000381433 1219 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
RSPO3Q9BXY4 ADM-205ENST00000528544 586 ntTSL 2 BASIC17.53■□□□□ 0.4
RSPO3Q9BXY4 B3GAT3-205ENST00000534026 1120 ntTSL 2 BASIC17.53■□□□□ 0.4
RSPO3Q9BXY4 SIVA1-203ENST00000535554 1244 ntAPPRIS ALT1 TSL 2 BASIC17.53■□□□□ 0.4
RSPO3Q9BXY4 HLX-AS1-201ENST00000552026 563 ntTSL 4 BASIC17.53■□□□□ 0.4
RSPO3Q9BXY4 RN7SL471P-201ENST00000580476 299 ntBASIC17.53■□□□□ 0.4
RSPO3Q9BXY4 PTTG1IP-203ENST00000397887 2413 ntTSL 4 BASIC17.53■□□□□ 0.4
RSPO3Q9BXY4 MMD2-202ENST00000404774 2415 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
RSPO3Q9BXY4 IL17RC-215ENST00000455057 2244 ntAPPRIS ALT2 TSL 1 (best) BASIC17.53■□□□□ 0.4
RSPO3Q9BXY4 CCNJL-203ENST00000393977 3320 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
RSPO3Q9BXY4 HYOU1-212ENST00000532519 2162 ntTSL 5 BASIC17.53■□□□□ 0.4
RSPO3Q9BXY4 GTPBP2-202ENST00000307126 2933 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
RSPO3Q9BXY4 DHRS12-201ENST00000218981 1970 ntTSL 2 BASIC17.53■□□□□ 0.4
RSPO3Q9BXY4 FST-201ENST00000256759 2519 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
RSPO3Q9BXY4 AP5S1-202ENST00000379567 1791 ntAPPRIS P1 TSL 2 BASIC17.53■□□□□ 0.4
RSPO3Q9BXY4 TGFBR1-202ENST00000374994 6516 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
RSPO3Q9BXY4 CSF1-203ENST00000369801 1364 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
RSPO3Q9BXY4 CEMP1-202ENST00000567119 1374 ntAPPRIS P2 BASIC17.53■□□□□ 0.4
RSPO3Q9BXY4 SPAG1-206ENST00000520643 1723 ntTSL 2 BASIC17.52■□□□□ 0.4
RSPO3Q9BXY4 MCCC1-214ENST00000610757 2410 ntTSL 5 BASIC17.52■□□□□ 0.4
RSPO3Q9BXY4 ISL2-201ENST00000290759 1881 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
RSPO3Q9BXY4 MRPL4-202ENST00000307422 1320 ntAPPRIS P2 TSL 5 BASIC17.52■□□□□ 0.4
RSPO3Q9BXY4 STRADB-202ENST00000392249 2190 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
RSPO3Q9BXY4 AL499627.1-201ENST00000569373 2188 ntBASIC17.52■□□□□ 0.4
RSPO3Q9BXY4 TCP11-209ENST00000444780 1841 ntAPPRIS ALT2 TSL 2 BASIC17.52■□□□□ 0.4
RSPO3Q9BXY4 TMEM25-203ENST00000354284 1456 ntTSL 2 BASIC17.52■□□□□ 0.4
RSPO3Q9BXY4 IFFO1-204ENST00000396840 2677 ntAPPRIS ALT1 TSL 5 BASIC17.52■□□□□ 0.4
RSPO3Q9BXY4 NMRK1-201ENST00000361092 1185 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
RSPO3Q9BXY4 F8A2-201ENST00000369505 1116 ntAPPRIS P1 BASIC17.52■□□□□ 0.4
RSPO3Q9BXY4 ZDHHC12-202ENST00000372667 1187 ntTSL 5 BASIC17.52■□□□□ 0.4
RSPO3Q9BXY4 PUSL1-201ENST00000379031 1287 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
RSPO3Q9BXY4 ZNF436-AS1-202ENST00000437367 606 ntTSL 2 BASIC17.52■□□□□ 0.4
RSPO3Q9BXY4 Z98884.1-201ENST00000451646 830 ntTSL 3 BASIC17.52■□□□□ 0.4
RSPO3Q9BXY4 AC137630.1-201ENST00000452042 782 ntTSL 4 BASIC17.52■□□□□ 0.4
RSPO3Q9BXY4 AC133681.1-201ENST00000465482 601 ntBASIC17.52■□□□□ 0.4
RSPO3Q9BXY4 HGNC:18790-208ENST00000506380 798 ntAPPRIS P1 TSL 3 BASIC17.52■□□□□ 0.4
Retrieved 100 of 98,524 protein–RNA pairs in 8.1 ms