Protein–RNA interactions for Protein: Q99986

VRK1, Serine/threonine-protein kinase VRK1, humanhuman

Predicted RBP Predictions only

Length 396 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VRK1Q99986 AC140479.4-201ENST00000561715 463 ntTSL 4 BASIC16.83■□□□□ 0.28
VRK1Q99986 SNAI3-AS1-202ENST00000563475 2081 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
VRK1Q99986 SUMO2-203ENST00000578238 490 ntTSL 2 BASIC16.83■□□□□ 0.28
VRK1Q99986 TNNT1-208ENST00000587465 1065 ntAPPRIS ALT2 TSL 5 BASIC16.83■□□□□ 0.28
VRK1Q99986 ACOT2-204ENST00000613168 1553 ntAPPRIS P5 TSL 1 (best) BASIC16.83■□□□□ 0.28
VRK1Q99986 NOMO1-201ENST00000287667 4355 ntAPPRIS P2 TSL 1 (best) BASIC16.83■□□□□ 0.28
VRK1Q99986 STAU2-229ENST00000524300 3065 ntAPPRIS P4 TSL 2 BASIC16.83■□□□□ 0.28
VRK1Q99986 CDK11B-201ENST00000340677 2534 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
VRK1Q99986 ACADVL-203ENST00000356839 2323 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
VRK1Q99986 MZT1-201ENST00000377818 2299 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
VRK1Q99986 CPEB1-214ENST00000617522 2220 ntTSL 5 BASIC16.82■□□□□ 0.28
VRK1Q99986 PSMD3-201ENST00000264639 2158 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
VRK1Q99986 TRAM1L1-201ENST00000310754 2023 ntAPPRIS P1 BASIC16.82■□□□□ 0.28
VRK1Q99986 ACAP3-202ENST00000354700 3896 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
VRK1Q99986 ADCY9-201ENST00000294016 7725 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
VRK1Q99986 TREX2-206ENST00000370232 1864 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
VRK1Q99986 RAD23A-203ENST00000586534 1746 ntAPPRIS P3 TSL 1 (best) BASIC16.82■□□□□ 0.28
VRK1Q99986 MRPS2-201ENST00000241600 1510 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
VRK1Q99986 DMAP1-202ENST00000361745 1545 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
VRK1Q99986 AP006587.1-201ENST00000534129 1502 ntBASIC16.82■□□□□ 0.28
VRK1Q99986 PRDM5-201ENST00000264808 5330 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
VRK1Q99986 FAM26F-202ENST00000368605 1117 ntAPPRIS P1 TSL 5 BASIC16.82■□□□□ 0.28
VRK1Q99986 ZFYVE1-202ENST00000394207 1183 ntTSL 2 BASIC16.82■□□□□ 0.28
VRK1Q99986 TMEM263-208ENST00000551489 621 ntTSL 4 BASIC16.82■□□□□ 0.28
VRK1Q99986 AC005943.1-201ENST00000585937 1002 ntAPPRIS P1 TSL 3 BASIC16.82■□□□□ 0.28
VRK1Q99986 SYNGR4-202ENST00000595322 533 ntTSL 3 BASIC16.82■□□□□ 0.28
VRK1Q99986 NTAN1-211ENST00000622833 1049 ntTSL 2 BASIC16.82■□□□□ 0.28
VRK1Q99986 NTAN1-212ENST00000624579 1115 ntTSL 2 BASIC16.82■□□□□ 0.28
VRK1Q99986 ISLR2-201ENST00000361742 4817 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
VRK1Q99986 NAGPA-AS1-202ENST00000632058 2265 ntTSL 2 BASIC16.82■□□□□ 0.28
VRK1Q99986 ATP2A2-201ENST00000308664 4453 ntAPPRIS ALT1 TSL 1 (best) BASIC16.82■□□□□ 0.28
VRK1Q99986 ST6GALNAC6-215ENST00000542456 2018 ntTSL 2 BASIC16.82■□□□□ 0.28
VRK1Q99986 PFKFB3-202ENST00000360521 1964 ntAPPRIS P2 TSL 5 BASIC16.82■□□□□ 0.28
VRK1Q99986 UBXN6-201ENST00000301281 1943 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
VRK1Q99986 TH-203ENST00000352909 1889 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
VRK1Q99986 TH-205ENST00000381175 1898 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
VRK1Q99986 DGKI-202ENST00000424189 4163 ntAPPRIS ALT2 TSL 5 BASIC16.81■□□□□ 0.28
VRK1Q99986 KIAA1549-201ENST00000422774 6283 ntAPPRIS ALT2 TSL 1 (best) BASIC16.81■□□□□ 0.28
VRK1Q99986 PDLIM2-221ENST00000622702 1490 ntTSL 5 BASIC16.81■□□□□ 0.28
VRK1Q99986 IQGAP2-201ENST00000274364 5844 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
VRK1Q99986 SOCS3-201ENST00000330871 2734 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
VRK1Q99986 ASPM-201ENST00000294732 6132 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
VRK1Q99986 RBP4-202ENST00000371467 1314 ntAPPRIS P1 TSL 5 BASIC16.81■□□□□ 0.28
VRK1Q99986 ETFA-202ENST00000433983 1346 ntTSL 2 BASIC16.81■□□□□ 0.28
VRK1Q99986 CACNA1B-205ENST00000371363 9758 ntAPPRIS ALT2 TSL 5 BASIC16.81■□□□□ 0.28
VRK1Q99986 PTS-201ENST00000280362 935 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
VRK1Q99986 HYAL3-203ENST00000415204 959 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
VRK1Q99986 FAM197Y1-201ENST00000421178 764 ntBASIC16.81■□□□□ 0.28
VRK1Q99986 TMUB1-205ENST00000482202 899 ntAPPRIS P1 TSL 3 BASIC16.81■□□□□ 0.28
VRK1Q99986 AC021087.1-201ENST00000512642 522 ntTSL 2 BASIC16.81■□□□□ 0.28
VRK1Q99986 RNASEK-202ENST00000548577 810 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
VRK1Q99986 NUBP2-206ENST00000565134 815 ntTSL 5 BASIC16.81■□□□□ 0.28
VRK1Q99986 CD177P1-201ENST00000606252 935 ntBASIC16.81■□□□□ 0.28
VRK1Q99986 RPL23AP53-202ENST00000606507 370 ntTSL 3 BASIC16.81■□□□□ 0.28
VRK1Q99986 PPARG-202ENST00000309576 1870 ntAPPRIS ALT1 TSL 2 BASIC16.81■□□□□ 0.28
VRK1Q99986 SOGA3-203ENST00000525778 4077 ntAPPRIS P1 TSL 5 BASIC16.81■□□□□ 0.28
VRK1Q99986 LINC00511-201ENST00000453722 1716 ntTSL 2 BASIC16.81■□□□□ 0.28
VRK1Q99986 DMRT2-204ENST00000382251 2292 ntAPPRIS P1 TSL 5 BASIC16.81■□□□□ 0.28
VRK1Q99986 ATIC-205ENST00000435675 2275 ntTSL 2 BASIC16.81■□□□□ 0.28
VRK1Q99986 OGG1-203ENST00000302036 2220 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
VRK1Q99986 C17orf62-204ENST00000437807 2242 ntAPPRIS P1 TSL 2 BASIC16.81■□□□□ 0.28
VRK1Q99986 PNKP-214ENST00000600573 1602 ntTSL 5 BASIC16.81■□□□□ 0.28
VRK1Q99986 ACTR8-202ENST00000482349 2091 ntTSL 2 BASIC16.81■□□□□ 0.28
VRK1Q99986 LBX2-AS1-202ENST00000603175 2083 ntBASIC16.81■□□□□ 0.28
VRK1Q99986 GPR20-201ENST00000377741 1515 ntAPPRIS P1 TSL 3 BASIC16.8■□□□□ 0.28
VRK1Q99986 CHPF-201ENST00000243776 3013 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
VRK1Q99986 SRRM2-201ENST00000301740 9353 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
VRK1Q99986 CBX1-202ENST00000393408 2422 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
VRK1Q99986 ARL5A-201ENST00000295087 5326 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
VRK1Q99986 CCT4-204ENST00000544079 2261 ntTSL 2 BASIC16.8■□□□□ 0.28
VRK1Q99986 CRACR2B-207ENST00000528542 1792 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
VRK1Q99986 USP21-201ENST00000289865 2195 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
VRK1Q99986 AL138752.2-201ENST00000540557 2591 ntAPPRIS P1 TSL 5 BASIC16.8■□□□□ 0.28
VRK1Q99986 AC110769.1-201ENST00000420161 815 ntTSL 3 BASIC16.8■□□□□ 0.28
VRK1Q99986 MFSD4A-206ENST00000489709 1136 ntTSL 5 BASIC16.8■□□□□ 0.28
VRK1Q99986 MRPL4-204ENST00000588502 827 ntTSL 2 BASIC16.8■□□□□ 0.28
VRK1Q99986 AC026471.5-201ENST00000615068 467 ntBASIC16.8■□□□□ 0.28
VRK1Q99986 LINC01558-202ENST00000495520 1652 ntTSL 2 BASIC16.8■□□□□ 0.28
VRK1Q99986 EPOR-208ENST00000592375 2086 ntTSL 2 BASIC16.8■□□□□ 0.28
VRK1Q99986 UMOD-201ENST00000302509 2477 ntAPPRIS P3 TSL 5 BASIC16.8■□□□□ 0.28
VRK1Q99986 PTH2R-204ENST00000617735 2472 ntTSL 2 BASIC16.8■□□□□ 0.28
VRK1Q99986 ANKRD6-202ENST00000369408 5258 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
VRK1Q99986 GNB1-201ENST00000378609 3132 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
VRK1Q99986 CASP6-201ENST00000265164 1548 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
VRK1Q99986 SCRN2-201ENST00000290216 1548 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
VRK1Q99986 MTSS1L-204ENST00000616026 2241 ntAPPRIS ALT2 TSL 5 BASIC16.8■□□□□ 0.28
VRK1Q99986 MEGF9-201ENST00000373930 6298 ntAPPRIS P1 TSL 2 BASIC16.8■□□□□ 0.28
VRK1Q99986 ESX1-201ENST00000372588 1495 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
VRK1Q99986 AC007613.1-201ENST00000572811 2597 ntBASIC16.8■□□□□ 0.28
VRK1Q99986 MEF2B-204ENST00000424583 1405 ntAPPRIS P1 TSL 5 BASIC16.79■□□□□ 0.28
VRK1Q99986 GYG1-202ENST00000345003 2052 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
VRK1Q99986 TMEM91-203ENST00000392002 1389 ntAPPRIS P1 TSL 2 BASIC16.79■□□□□ 0.28
VRK1Q99986 DENND2A-201ENST00000275884 3735 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
VRK1Q99986 NUDT10-202ENST00000376006 2001 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
VRK1Q99986 CASD1-201ENST00000297273 3942 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
VRK1Q99986 KRT6C-201ENST00000252250 2289 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
VRK1Q99986 KRT6B-201ENST00000252252 2282 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
VRK1Q99986 CDH5-204ENST00000563425 1932 ntTSL 5 BASIC16.79■□□□□ 0.28
VRK1Q99986 DLEU2-203ENST00000425586 1267 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
VRK1Q99986 CCK-203ENST00000434608 747 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Retrieved 100 of 98,524 protein–RNA pairs in 25.2 ms