Protein–RNA interactions for Protein: Q96F44

TRIM11, E3 ubiquitin-protein ligase TRIM11, humanhuman

Predictions only

Length 468 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM11Q96F44 USP25-204ENST00000400183 5341 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
TRIM11Q96F44 CD72-201ENST00000259633 1548 ntAPPRIS P2 TSL 1 (best) BASIC20.17■□□□□ 0.82
TRIM11Q96F44 WAC-205ENST00000375664 5924 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
TRIM11Q96F44 CYP46A1-202ENST00000380228 1597 ntTSL 2 BASIC20.17■□□□□ 0.82
TRIM11Q96F44 FIP1L1-202ENST00000337488 2198 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
TRIM11Q96F44 FIP1L1-203ENST00000358575 2180 ntAPPRIS P4 TSL 2 BASIC20.17■□□□□ 0.82
TRIM11Q96F44 SYN2-206ENST00000621198 2674 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
TRIM11Q96F44 MRPL12-201ENST00000333676 1028 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
TRIM11Q96F44 ISG20-202ENST00000379224 540 ntTSL 3 BASIC20.17■□□□□ 0.82
TRIM11Q96F44 LY6E-202ENST00000429120 1173 ntAPPRIS P2 TSL 1 (best) BASIC20.17■□□□□ 0.82
TRIM11Q96F44 NME6-209ENST00000442597 757 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
TRIM11Q96F44 MFSD4A-206ENST00000489709 1136 ntTSL 5 BASIC20.17■□□□□ 0.82
TRIM11Q96F44 AC006058.3-201ENST00000606217 1069 ntBASIC20.17■□□□□ 0.82
TRIM11Q96F44 RPL23AP53-202ENST00000606507 370 ntTSL 3 BASIC20.17■□□□□ 0.82
TRIM11Q96F44 AL445675.2-201ENST00000620291 557 ntBASIC20.17■□□□□ 0.82
TRIM11Q96F44 CROCCP4-202ENST00000633627 573 ntTSL 3 BASIC20.17■□□□□ 0.82
TRIM11Q96F44 AC083906.6-201ENST00000641366 219 ntBASIC20.17■□□□□ 0.82
TRIM11Q96F44 AC073648.6-201ENST00000641589 218 ntBASIC20.17■□□□□ 0.82
TRIM11Q96F44 AHRR-204ENST00000506456 2350 ntTSL 2 BASIC20.17■□□□□ 0.82
TRIM11Q96F44 TH-203ENST00000352909 1889 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
TRIM11Q96F44 ANXA8L1-203ENST00000613703 1874 ntTSL 2 BASIC20.17■□□□□ 0.82
TRIM11Q96F44 CDC14B-203ENST00000375242 2965 ntTSL 2 BASIC20.17■□□□□ 0.82
TRIM11Q96F44 RREB1-201ENST00000334984 5789 ntAPPRIS ALT2 TSL 1 (best) BASIC20.17■□□□□ 0.82
TRIM11Q96F44 NXNL2-202ENST00000375855 1457 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
TRIM11Q96F44 KRT8P41-201ENST00000533985 1514 ntBASIC20.17■□□□□ 0.82
TRIM11Q96F44 PSRC1-202ENST00000369904 1584 ntAPPRIS ALT2 TSL 1 (best) BASIC20.17■□□□□ 0.82
TRIM11Q96F44 QKI-203ENST00000361752 9463 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
TRIM11Q96F44 AL031598.1-201ENST00000561511 1773 ntBASIC20.16■□□□□ 0.82
TRIM11Q96F44 DEF8-211ENST00000563795 1767 ntTSL 5 BASIC20.16■□□□□ 0.82
TRIM11Q96F44 DMD-208ENST00000378680 1858 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
TRIM11Q96F44 SRSF2-202ENST00000359995 1927 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
TRIM11Q96F44 PTGIR-201ENST00000291294 2107 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
TRIM11Q96F44 CCDC34-201ENST00000317945 2109 ntAPPRIS P3 TSL 1 (best) BASIC20.16■□□□□ 0.82
TRIM11Q96F44 MRGPRG-201ENST00000332314 870 ntAPPRIS P1 BASIC20.16■□□□□ 0.82
TRIM11Q96F44 MTFP1-203ENST00000407550 912 ntTSL 2 BASIC20.16■□□□□ 0.82
TRIM11Q96F44 CCDC124-201ENST00000445755 938 ntAPPRIS P1 TSL 2 BASIC20.16■□□□□ 0.82
TRIM11Q96F44 RTBDN-203ENST00000458671 1066 ntAPPRIS ALT2 TSL 1 (best) BASIC20.16■□□□□ 0.82
TRIM11Q96F44 ATP6V0E1-204ENST00000519911 718 ntTSL 2 BASIC20.16■□□□□ 0.82
TRIM11Q96F44 AC140479.4-201ENST00000561715 463 ntTSL 4 BASIC20.16■□□□□ 0.82
TRIM11Q96F44 FBXO17-202ENST00000595329 1299 ntAPPRIS P1 TSL 2 BASIC20.16■□□□□ 0.82
TRIM11Q96F44 AC010336.4-201ENST00000595655 438 ntTSL 5 BASIC20.16■□□□□ 0.82
TRIM11Q96F44 CCDC124-203ENST00000597436 1055 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
TRIM11Q96F44 CD24-208ENST00000622315 825 ntAPPRIS ALT2 TSL 2 BASIC20.16■□□□□ 0.82
TRIM11Q96F44 CABP2-204ENST00000636477 941 ntTSL 5 BASIC20.16■□□□□ 0.82
TRIM11Q96F44 MYC-205ENST00000524013 2150 ntAPPRIS ALT1 TSL 1 (best) BASIC20.16■□□□□ 0.82
TRIM11Q96F44 TMEM198-202ENST00000373883 2218 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
TRIM11Q96F44 TH-202ENST00000333684 1535 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
TRIM11Q96F44 UBE3C-201ENST00000348165 5229 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
TRIM11Q96F44 RASSF1-210ENST00000616212 1842 ntTSL 2 BASIC20.16■□□□□ 0.82
TRIM11Q96F44 GCDH-216ENST00000591470 1867 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
TRIM11Q96F44 FBXL18-203ENST00000453700 1932 ntAPPRIS ALT2 TSL 1 (best) BASIC20.15■□□□□ 0.82
TRIM11Q96F44 SLC35B2-205ENST00000538577 1909 ntTSL 2 BASIC20.15■□□□□ 0.82
TRIM11Q96F44 KCTD12-201ENST00000377474 6225 ntAPPRIS P1 BASIC20.15■□□□□ 0.82
TRIM11Q96F44 CYTH1-209ENST00000589296 2159 ntTSL 5 BASIC20.15■□□□□ 0.82
TRIM11Q96F44 SLC29A2-201ENST00000311161 2262 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
TRIM11Q96F44 GOSR2-226ENST00000639287 2367 ntTSL 5 BASIC20.15■□□□□ 0.82
TRIM11Q96F44 SLC27A3-204ENST00000368661 2410 ntAPPRIS P2 TSL 1 (best) BASIC20.15■□□□□ 0.82
TRIM11Q96F44 IRS2-201ENST00000375856 8138 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
TRIM11Q96F44 ZFP69-202ENST00000372706 2871 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
TRIM11Q96F44 RPP25L-201ENST00000297613 1092 ntAPPRIS P1 TSL 2 BASIC20.15■□□□□ 0.82
TRIM11Q96F44 RAC3-201ENST00000306897 1090 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
TRIM11Q96F44 SERF1A-201ENST00000317633 963 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
TRIM11Q96F44 SPATA2L-202ENST00000335360 1001 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
TRIM11Q96F44 FLYWCH2-202ENST00000396958 1036 ntAPPRIS P2 TSL 1 (best) BASIC20.15■□□□□ 0.82
TRIM11Q96F44 CCT7-202ENST00000398422 1234 ntTSL 2 BASIC20.15■□□□□ 0.82
TRIM11Q96F44 AC131212.4-201ENST00000623606 975 ntBASIC20.15■□□□□ 0.82
TRIM11Q96F44 FCMR-202ENST00000442471 1441 ntTSL 2 BASIC20.15■□□□□ 0.82
TRIM11Q96F44 NR2F1-205ENST00000615873 1427 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
TRIM11Q96F44 TRIP6-201ENST00000200457 1942 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
TRIM11Q96F44 COPS7A-204ENST00000534947 2034 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
TRIM11Q96F44 BAIAP2-204ENST00000428708 2095 ntAPPRIS ALT2 TSL 1 (best) BASIC20.15■□□□□ 0.82
TRIM11Q96F44 ZBTB33-202ENST00000557385 2346 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
TRIM11Q96F44 TEAD2-202ENST00000377214 2440 ntAPPRIS ALT1 TSL 2 BASIC20.15■□□□□ 0.82
TRIM11Q96F44 SMARCC1-201ENST00000254480 6375 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.82
TRIM11Q96F44 ARHGAP28-203ENST00000383472 2295 ntAPPRIS ALT2 TSL 5 BASIC20.14■□□□□ 0.81
TRIM11Q96F44 KLHL23-201ENST00000272797 2087 ntAPPRIS P1 TSL 2 BASIC20.14■□□□□ 0.81
TRIM11Q96F44 CDC42EP2-201ENST00000279249 2023 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
TRIM11Q96F44 CLIP2-202ENST00000361545 5445 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
TRIM11Q96F44 FAM228A-201ENST00000295150 1774 ntAPPRIS P2 TSL 1 (best) BASIC20.14■□□□□ 0.81
TRIM11Q96F44 PFN2-203ENST00000452853 1780 ntAPPRIS ALT1 TSL 1 (best) BASIC20.14■□□□□ 0.81
TRIM11Q96F44 TMEM74-201ENST00000297459 1741 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
TRIM11Q96F44 PMAIP1-201ENST00000269518 1262 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
TRIM11Q96F44 C7orf50-201ENST00000357429 1294 ntAPPRIS P2 TSL 1 (best) BASIC20.14■□□□□ 0.81
TRIM11Q96F44 PSMG1-202ENST00000380900 907 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
TRIM11Q96F44 NIFKP9-201ENST00000419265 221 ntBASIC20.14■□□□□ 0.81
TRIM11Q96F44 PTPA-216ENST00000432651 857 ntTSL 2 BASIC20.14■□□□□ 0.81
TRIM11Q96F44 Z85996.1-201ENST00000494644 937 ntBASIC20.14■□□□□ 0.81
TRIM11Q96F44 CD99P1-205ENST00000527459 561 ntBASIC20.14■□□□□ 0.81
TRIM11Q96F44 TESC-AS1-201ENST00000547006 1053 ntTSL 2 BASIC20.14■□□□□ 0.81
TRIM11Q96F44 JPT2-204ENST00000561516 1065 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
TRIM11Q96F44 KLHL2-201ENST00000226725 3134 ntAPPRIS P3 TSL 1 (best) BASIC20.14■□□□□ 0.81
TRIM11Q96F44 ZBTB46-203ENST00000395104 5198 ntAPPRIS P1 TSL 2 BASIC20.14■□□□□ 0.81
TRIM11Q96F44 WDTC1-201ENST00000319394 4819 ntAPPRIS ALT1 TSL 1 (best) BASIC20.14■□□□□ 0.81
TRIM11Q96F44 NFATC1-201ENST00000253506 4642 ntAPPRIS P3 TSL 1 (best) BASIC20.14■□□□□ 0.81
TRIM11Q96F44 ZKSCAN7-205ENST00000426540 2791 ntAPPRIS P1 TSL 2 BASIC20.14■□□□□ 0.81
TRIM11Q96F44 COX20-203ENST00000411948 2631 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
TRIM11Q96F44 LRRC27-203ENST00000368613 2113 ntAPPRIS P3 TSL 1 (best) BASIC20.14■□□□□ 0.81
TRIM11Q96F44 SEC11C-202ENST00000509791 2054 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
TRIM11Q96F44 UBXN2A-201ENST00000309033 6066 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
TRIM11Q96F44 LRCH3-207ENST00000441090 2034 ntTSL 2 BASIC20.14■□□□□ 0.81
Retrieved 100 of 98,524 protein–RNA pairs in 44.2 ms