Protein–RNA interactions for Protein: Q96BD0

SLCO4A1, Solute carrier organic anion transporter family member 4A1, humanhuman

Predictions only

Length 722 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLCO4A1Q96BD0 CCDC43-201ENST00000315286 2082 ntAPPRIS P2 TSL 1 (best) BASIC17.86■□□□□ 0.45
SLCO4A1Q96BD0 RHOBTB2-201ENST00000251822 5451 ntAPPRIS P3 TSL 1 (best) BASIC17.86■□□□□ 0.45
SLCO4A1Q96BD0 TFAP4-201ENST00000204517 2215 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
SLCO4A1Q96BD0 SPI1-201ENST00000227163 1168 ntAPPRIS ALT1 TSL 2 BASIC17.86■□□□□ 0.45
SLCO4A1Q96BD0 CFD-201ENST00000327726 1201 ntAPPRIS P3 TSL 1 (best) BASIC17.86■□□□□ 0.45
SLCO4A1Q96BD0 CNN2P6-201ENST00000439038 900 ntBASIC17.86■□□□□ 0.45
SLCO4A1Q96BD0 KCTD10-211ENST00000540411 866 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
SLCO4A1Q96BD0 SLC25A29-212ENST00000555927 960 ntTSL 2 BASIC17.86■□□□□ 0.45
SLCO4A1Q96BD0 LOXL1-AS1-208ENST00000565756 885 ntTSL 2 BASIC17.86■□□□□ 0.45
SLCO4A1Q96BD0 CAPNS1-205ENST00000588780 1035 ntAPPRIS ALT2 TSL 5 BASIC17.86■□□□□ 0.45
SLCO4A1Q96BD0 HIST1H2AL-201ENST00000613174 393 ntAPPRIS P1 BASIC17.86■□□□□ 0.45
SLCO4A1Q96BD0 SLC12A5-217ENST00000626937 1224 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
SLCO4A1Q96BD0 ZNF416-201ENST00000196489 2561 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
SLCO4A1Q96BD0 RIC8A-208ENST00000527696 2565 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
SLCO4A1Q96BD0 GAREM2-201ENST00000401533 4161 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
SLCO4A1Q96BD0 FN3K-201ENST00000300784 1434 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
SLCO4A1Q96BD0 PDLIM7-203ENST00000359895 1567 ntAPPRIS ALT2 TSL 1 (best) BASIC17.86■□□□□ 0.45
SLCO4A1Q96BD0 SNX7-205ENST00000529992 1589 ntTSL 2 BASIC17.86■□□□□ 0.45
SLCO4A1Q96BD0 KCNK17-201ENST00000373231 1658 ntAPPRIS P3 TSL 1 (best) BASIC17.86■□□□□ 0.45
SLCO4A1Q96BD0 ARAP1-AS2-201ENST00000500163 1824 ntTSL 2 BASIC17.86■□□□□ 0.45
SLCO4A1Q96BD0 PRR23B-201ENST00000329447 1896 ntAPPRIS P1 BASIC17.86■□□□□ 0.45
SLCO4A1Q96BD0 NEXN-AS1-201ENST00000421331 2292 ntTSL 2 BASIC17.86■□□□□ 0.45
SLCO4A1Q96BD0 MTHFD2L-203ENST00000395759 2354 ntAPPRIS P2 TSL 5 BASIC17.86■□□□□ 0.45
SLCO4A1Q96BD0 ACOXL-205ENST00000439055 2373 ntTSL 2 BASIC17.86■□□□□ 0.45
SLCO4A1Q96BD0 ETNK2-203ENST00000367202 2434 ntAPPRIS P3 TSL 1 (best) BASIC17.86■□□□□ 0.45
SLCO4A1Q96BD0 ACADS-201ENST00000242592 1950 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
SLCO4A1Q96BD0 HCFC1R1-201ENST00000248089 965 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
SLCO4A1Q96BD0 PSMD6-201ENST00000295901 1430 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
SLCO4A1Q96BD0 MAF1-201ENST00000322428 1677 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
SLCO4A1Q96BD0 IFFO1-201ENST00000336604 2686 ntAPPRIS P3 TSL 1 (best) BASIC17.85■□□□□ 0.45
SLCO4A1Q96BD0 FGF17-201ENST00000359441 1714 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
SLCO4A1Q96BD0 POC1A-202ENST00000394970 1999 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
SLCO4A1Q96BD0 MPRIP-203ENST00000395806 527 ntTSL 3 BASIC17.85■□□□□ 0.45
SLCO4A1Q96BD0 SERP1-205ENST00000487153 657 ntTSL 4 BASIC17.85■□□□□ 0.45
SLCO4A1Q96BD0 FAM47E-204ENST00000510328 1002 ntAPPRIS ALT2 TSL 2 BASIC17.85■□□□□ 0.45
SLCO4A1Q96BD0 AC108002.2-201ENST00000519782 340 ntTSL 4 BASIC17.85■□□□□ 0.45
SLCO4A1Q96BD0 EIF3C-211ENST00000566866 2986 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
SLCO4A1Q96BD0 AC099398.1-201ENST00000567919 2776 ntBASIC17.85■□□□□ 0.45
SLCO4A1Q96BD0 HCFC1R1-207ENST00000574980 845 ntTSL 5 BASIC17.85■□□□□ 0.45
SLCO4A1Q96BD0 AC011825.4-201ENST00000582233 473 ntTSL 2 BASIC17.85■□□□□ 0.45
SLCO4A1Q96BD0 AC005697.1-201ENST00000582441 582 ntAPPRIS P1 TSL 4 BASIC17.85■□□□□ 0.45
SLCO4A1Q96BD0 HAS1-203ENST00000594621 760 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
SLCO4A1Q96BD0 MIR5787-201ENST00000611784 55 ntBASIC17.85■□□□□ 0.45
SLCO4A1Q96BD0 BNIP2-213ENST00000612191 2515 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
SLCO4A1Q96BD0 CCAR2-214ENST00000613179 1421 ntTSL 5 BASIC17.85■□□□□ 0.45
SLCO4A1Q96BD0 AP001273.2-201ENST00000638767 2993 ntAPPRIS P1 TSL 5 BASIC17.85■□□□□ 0.45
SLCO4A1Q96BD0 STRN4-201ENST00000263280 3210 ntAPPRIS P3 TSL 1 (best) BASIC17.85■□□□□ 0.45
SLCO4A1Q96BD0 IL17RC-201ENST00000295981 2621 ntAPPRIS P4 TSL 2 BASIC17.85■□□□□ 0.45
SLCO4A1Q96BD0 RWDD4-202ENST00000327570 2590 ntAPPRIS ALT1 TSL 3 BASIC17.85■□□□□ 0.45
SLCO4A1Q96BD0 MYC-207ENST00000621592 2366 ntAPPRIS ALT1 TSL 1 (best) BASIC17.84■□□□□ 0.45
SLCO4A1Q96BD0 SORCS2-203ENST00000507866 6152 ntAPPRIS P2 TSL 1 (best) BASIC17.84■□□□□ 0.45
SLCO4A1Q96BD0 C14orf180-202ENST00000410013 2009 ntAPPRIS P3 TSL 1 (best) BASIC17.84■□□□□ 0.45
SLCO4A1Q96BD0 FAM49B-214ENST00000519540 2021 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
SLCO4A1Q96BD0 SLC35B2-205ENST00000538577 1909 ntTSL 2 BASIC17.84■□□□□ 0.45
SLCO4A1Q96BD0 SPON2-203ENST00000431380 1802 ntAPPRIS P1 TSL 5 BASIC17.84■□□□□ 0.45
SLCO4A1Q96BD0 KDM2A-202ENST00000398645 6511 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
SLCO4A1Q96BD0 MFSD1-201ENST00000264266 1594 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
SLCO4A1Q96BD0 SMUG1-202ENST00000337581 1571 ntAPPRIS P1 TSL 2 BASIC17.84■□□□□ 0.45
SLCO4A1Q96BD0 AP2M1-203ENST00000411763 1577 ntTSL 5 BASIC17.84■□□□□ 0.45
SLCO4A1Q96BD0 TUBA8-201ENST00000316027 1518 ntTSL 2 BASIC17.84■□□□□ 0.45
SLCO4A1Q96BD0 SLC22A18-202ENST00000347936 1542 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
SLCO4A1Q96BD0 C3orf18-205ENST00000441239 1490 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
SLCO4A1Q96BD0 ITGB5-201ENST00000296181 4372 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
SLCO4A1Q96BD0 EPB41L5-203ENST00000443124 2872 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
SLCO4A1Q96BD0 LTBP3-202ENST00000322147 4046 ntAPPRIS P3 TSL 1 (best) BASIC17.84■□□□□ 0.45
SLCO4A1Q96BD0 DDAH2-211ENST00000375787 1330 ntAPPRIS P1 TSL 5 BASIC17.84■□□□□ 0.45
SLCO4A1Q96BD0 TSLP-203ENST00000420978 2621 ntAPPRIS ALT2 TSL 1 (best) BASIC17.84■□□□□ 0.45
SLCO4A1Q96BD0 ASIP-201ENST00000374954 586 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
SLCO4A1Q96BD0 IL15RA-201ENST00000379971 588 ntTSL 3 BASIC17.84■□□□□ 0.45
SLCO4A1Q96BD0 FAM207A-202ENST00000397826 880 ntAPPRIS ALT1 TSL 1 (best) BASIC17.84■□□□□ 0.45
SLCO4A1Q96BD0 LINC01678-201ENST00000411694 863 ntTSL 5 BASIC17.84■□□□□ 0.45
SLCO4A1Q96BD0 AC012313.1-204ENST00000444227 462 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
SLCO4A1Q96BD0 ZNF467-202ENST00000484747 913 ntTSL 2 BASIC17.84■□□□□ 0.45
SLCO4A1Q96BD0 HTT-AS-201ENST00000503893 515 ntTSL 4 BASIC17.84■□□□□ 0.45
SLCO4A1Q96BD0 DBI-210ENST00000542275 757 ntTSL 5 BASIC17.84■□□□□ 0.45
SLCO4A1Q96BD0 GGTLC3-201ENST00000619998 968 ntAPPRIS P1 TSL 5 BASIC17.84■□□□□ 0.45
SLCO4A1Q96BD0 NOS3-210ENST00000484524 2537 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
SLCO4A1Q96BD0 PTPN6-204ENST00000456013 2389 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
SLCO4A1Q96BD0 PRKRIP1-208ENST00000496391 3430 ntAPPRIS P1 TSL 2 BASIC17.84■□□□□ 0.45
SLCO4A1Q96BD0 SLC22A4-201ENST00000200652 2201 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
SLCO4A1Q96BD0 CPAMD8-202ENST00000388925 5355 ntTSL 5 BASIC17.84■□□□□ 0.45
SLCO4A1Q96BD0 LRRC14-201ENST00000292524 5328 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
SLCO4A1Q96BD0 SDCBP-202ENST00000413219 2086 ntAPPRIS P3 TSL 2 BASIC17.84■□□□□ 0.45
SLCO4A1Q96BD0 SNAI3-AS1-205ENST00000568633 2096 ntBASIC17.84■□□□□ 0.45
SLCO4A1Q96BD0 AMDHD2-203ENST00000413459 2049 ntTSL 2 BASIC17.84■□□□□ 0.45
SLCO4A1Q96BD0 SLC1A5-205ENST00000594991 2031 ntTSL 2 BASIC17.84■□□□□ 0.45
SLCO4A1Q96BD0 MST1R-214ENST00000613534 2025 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
SLCO4A1Q96BD0 GPSM2-201ENST00000264126 3032 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
SLCO4A1Q96BD0 POU3F2-201ENST00000328345 4879 ntAPPRIS P1 BASIC17.84■□□□□ 0.45
SLCO4A1Q96BD0 KCNA2-201ENST00000316361 2827 ntAPPRIS P1 TSL 2 BASIC17.84■□□□□ 0.45
SLCO4A1Q96BD0 AC142086.1-202ENST00000398669 1839 ntTSL 2 BASIC17.84■□□□□ 0.45
SLCO4A1Q96BD0 AC005906.2-207ENST00000639005 1580 ntTSL 5 BASIC17.83■□□□□ 0.45
SLCO4A1Q96BD0 B4GALT1-202ENST00000535206 1535 ntTSL 1 (best) BASIC17.83■□□□□ 0.45
SLCO4A1Q96BD0 UQCC3-202ENST00000531323 2288 ntAPPRIS P1 TSL 3 BASIC17.83■□□□□ 0.45
SLCO4A1Q96BD0 TMEM183A-201ENST00000367242 3019 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
SLCO4A1Q96BD0 TRIM15-207ENST00000376694 2214 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
SLCO4A1Q96BD0 DMKN-207ENST00000419602 1496 ntAPPRIS ALT2 TSL 1 (best) BASIC17.83■□□□□ 0.45
SLCO4A1Q96BD0 R3HCC1-210ENST00000625275 1489 ntAPPRIS ALT2 TSL 1 (best) BASIC17.83■□□□□ 0.45
SLCO4A1Q96BD0 PRORSD1P-202ENST00000563365 2154 ntBASIC17.83■□□□□ 0.45
SLCO4A1Q96BD0 RAB40C-203ENST00000535977 2717 ntAPPRIS P1 TSL 5 BASIC17.83■□□□□ 0.45
Retrieved 100 of 98,524 protein–RNA pairs in 22.5 ms