Protein–RNA interactions for Protein: Q93038

TNFRSF25, Tumor necrosis factor receptor superfamily member 25, humanhuman

Predictions only

Length 417 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF25Q93038 TMSB15B-201ENST00000419165 1666 ntAPPRIS P1 TSL 2 BASIC21.69■■□□□ 1.06
TNFRSF25Q93038 DNAJC8-201ENST00000263697 1759 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
TNFRSF25Q93038 PDLIM3-202ENST00000284770 1766 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
TNFRSF25Q93038 NECTIN3-211ENST00000493615 1876 ntAPPRIS ALT2 TSL 2 BASIC21.69■■□□□ 1.06
TNFRSF25Q93038 MBD3-207ENST00000590550 2782 ntTSL 2 BASIC21.69■■□□□ 1.06
TNFRSF25Q93038 ADGRB1-202ENST00000517894 6241 ntAPPRIS P1 TSL 5 BASIC21.69■■□□□ 1.06
TNFRSF25Q93038 NDUFS6-201ENST00000274137 1082 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
TNFRSF25Q93038 TPPP3-201ENST00000290942 1116 ntAPPRIS P1 TSL 2 BASIC21.69■■□□□ 1.06
TNFRSF25Q93038 CCDC107-202ENST00000378406 1016 ntAPPRIS ALT2 TSL 2 BASIC21.69■■□□□ 1.06
TNFRSF25Q93038 TPPP3-202ENST00000393957 1058 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
TNFRSF25Q93038 UBB-203ENST00000395839 1012 ntAPPRIS P1 TSL 2 BASIC21.69■■□□□ 1.06
TNFRSF25Q93038 AL596275.1-201ENST00000423464 877 ntBASIC21.69■■□□□ 1.06
TNFRSF25Q93038 BX322234.1-201ENST00000444188 980 ntTSL 3 BASIC21.69■■□□□ 1.06
TNFRSF25Q93038 PHF11-218ENST00000496623 1173 ntAPPRIS ALT2 TSL 2 BASIC21.69■■□□□ 1.06
TNFRSF25Q93038 AC091153.3-201ENST00000497885 472 ntTSL 2 BASIC21.69■■□□□ 1.06
TNFRSF25Q93038 AC093827.2-201ENST00000512654 315 ntBASIC21.69■■□□□ 1.06
TNFRSF25Q93038 BNIP3L-206ENST00000523515 915 ntTSL 2 BASIC21.69■■□□□ 1.06
TNFRSF25Q93038 AC117500.4-201ENST00000542797 617 ntTSL 3 BASIC21.69■■□□□ 1.06
TNFRSF25Q93038 TMEM263-208ENST00000551489 621 ntTSL 4 BASIC21.69■■□□□ 1.06
TNFRSF25Q93038 SIVA1-207ENST00000556195 674 ntTSL 3 BASIC21.69■■□□□ 1.06
TNFRSF25Q93038 CIRBP-217ENST00000588230 1013 ntTSL 5 BASIC21.69■■□□□ 1.06
TNFRSF25Q93038 SNX21-213ENST00000614929 587 ntTSL 5 BASIC21.69■■□□□ 1.06
TNFRSF25Q93038 FCMR-202ENST00000442471 1441 ntTSL 2 BASIC21.69■■□□□ 1.06
TNFRSF25Q93038 KRT8P3-201ENST00000519669 1449 ntBASIC21.69■■□□□ 1.06
TNFRSF25Q93038 AL445686.2-201ENST00000577528 1445 ntTSL 3 BASIC21.69■■□□□ 1.06
TNFRSF25Q93038 PSRC1-202ENST00000369904 1584 ntAPPRIS ALT2 TSL 1 (best) BASIC21.69■■□□□ 1.06
TNFRSF25Q93038 SMARCB1-204ENST00000407422 1643 ntAPPRIS ALT1 TSL 1 (best) BASIC21.69■■□□□ 1.06
TNFRSF25Q93038 PLA2G7-201ENST00000274793 1882 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
TNFRSF25Q93038 TRAM1L1-201ENST00000310754 2023 ntAPPRIS P1 BASIC21.68■■□□□ 1.06
TNFRSF25Q93038 TCTN1-223ENST00000550703 2149 ntTSL 2 BASIC21.68■■□□□ 1.06
TNFRSF25Q93038 LYSMD4-202ENST00000344791 2885 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
TNFRSF25Q93038 ATP5S-204ENST00000426751 1171 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
TNFRSF25Q93038 MFAP1P1-201ENST00000442257 1255 ntBASIC21.68■■□□□ 1.06
TNFRSF25Q93038 PSMB5-205ENST00000493471 1117 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
TNFRSF25Q93038 AC136628.4-201ENST00000520758 535 ntTSL 2 BASIC21.68■■□□□ 1.06
TNFRSF25Q93038 CDC42EP2-202ENST00000533419 1279 ntAPPRIS P1 TSL 3 BASIC21.68■■□□□ 1.06
TNFRSF25Q93038 AC134349.1-201ENST00000543969 385 ntTSL 3 BASIC21.68■■□□□ 1.06
TNFRSF25Q93038 TYROBP-209ENST00000589517 415 ntAPPRIS ALT1 TSL 1 (best) BASIC21.68■■□□□ 1.06
TNFRSF25Q93038 UBALD1-209ENST00000591897 1275 ntTSL 2 BASIC21.68■■□□□ 1.06
TNFRSF25Q93038 C16orf74-202ENST00000602583 1237 ntAPPRIS ALT2 TSL 1 (best) BASIC21.68■■□□□ 1.06
TNFRSF25Q93038 AC083906.6-201ENST00000641366 219 ntBASIC21.68■■□□□ 1.06
TNFRSF25Q93038 JAKMIP1-208ENST00000637373 1362 ntTSL 5 BASIC21.68■■□□□ 1.06
TNFRSF25Q93038 HAUS4-217ENST00000555367 1454 ntTSL 5 BASIC21.68■■□□□ 1.06
TNFRSF25Q93038 AC093525.10-201ENST00000625130 1569 ntBASIC21.68■■□□□ 1.06
TNFRSF25Q93038 PRRT1-202ENST00000375150 1726 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
TNFRSF25Q93038 QPCTL-202ENST00000366382 1814 ntTSL 2 BASIC21.68■■□□□ 1.06
TNFRSF25Q93038 DMD-208ENST00000378680 1858 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
TNFRSF25Q93038 KMT5C-201ENST00000255613 2308 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
TNFRSF25Q93038 LINC00315-201ENST00000441947 2323 ntTSL 5 BASIC21.68■■□□□ 1.06
TNFRSF25Q93038 PPM1B-201ENST00000282412 2606 ntAPPRIS P4 TSL 1 (best) BASIC21.68■■□□□ 1.06
TNFRSF25Q93038 PARD3-213ENST00000545260 5740 ntAPPRIS ALT2 TSL 1 (best) BASIC21.68■■□□□ 1.06
TNFRSF25Q93038 AIRE-201ENST00000291582 2257 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
TNFRSF25Q93038 AIPL1-209ENST00000575265 2111 ntAPPRIS ALT2 TSL 1 (best) BASIC21.67■■□□□ 1.06
TNFRSF25Q93038 FOXO1-201ENST00000379561 5735 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
TNFRSF25Q93038 CCNA1-202ENST00000440264 1758 ntAPPRIS P1 TSL 2 BASIC21.67■■□□□ 1.06
TNFRSF25Q93038 FADS2-209ENST00000521849 1703 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
TNFRSF25Q93038 GJA4-201ENST00000342280 1622 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
TNFRSF25Q93038 ABHD14B-202ENST00000361143 1636 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
TNFRSF25Q93038 CD72-201ENST00000259633 1548 ntAPPRIS P2 TSL 1 (best) BASIC21.67■■□□□ 1.06
TNFRSF25Q93038 CCDC106-201ENST00000308964 1546 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
TNFRSF25Q93038 CRYZL1-203ENST00000381540 1482 ntTSL 2 BASIC21.67■■□□□ 1.06
TNFRSF25Q93038 PRMT1-201ENST00000391851 1393 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
TNFRSF25Q93038 SYNE4-202ENST00000340477 1004 ntAPPRIS ALT2 TSL 1 (best) BASIC21.67■■□□□ 1.06
TNFRSF25Q93038 ZCCHC24-201ENST00000372333 906 ntTSL 2 BASIC21.67■■□□□ 1.06
TNFRSF25Q93038 UPK3B-203ENST00000394849 1041 ntAPPRIS ALT2 TSL 2 BASIC21.67■■□□□ 1.06
TNFRSF25Q93038 LINC00620-201ENST00000419618 996 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
TNFRSF25Q93038 AC097488.1-201ENST00000507834 756 ntBASIC21.67■■□□□ 1.06
TNFRSF25Q93038 AP005242.2-201ENST00000580065 1175 ntBASIC21.67■■□□□ 1.06
TNFRSF25Q93038 PNMA8A-203ENST00000602246 572 ntAPPRIS ALT2 TSL 4 BASIC21.67■■□□□ 1.06
TNFRSF25Q93038 AL590094.1-202ENST00000634619 1131 ntTSL 5 BASIC21.67■■□□□ 1.06
TNFRSF25Q93038 TSTD3-202ENST00000636394 336 ntAPPRIS ALT2 TSL 3 BASIC21.67■■□□□ 1.06
TNFRSF25Q93038 FGFR2-204ENST00000356226 3547 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
TNFRSF25Q93038 SYBU-232ENST00000533171 2498 ntAPPRIS ALT2 TSL 2 BASIC21.67■■□□□ 1.06
TNFRSF25Q93038 NTNG2-202ENST00000393229 4792 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
TNFRSF25Q93038 C19orf25-203ENST00000585675 1837 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
TNFRSF25Q93038 CD7-206ENST00000583376 1659 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
TNFRSF25Q93038 ACBD4-215ENST00000592162 1684 ntTSL 5 BASIC21.66■■□□□ 1.06
TNFRSF25Q93038 SEMA3D-202ENST00000444867 1605 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
TNFRSF25Q93038 MINOS1-NBL1-204ENST00000602662 1623 ntAPPRIS P1 TSL 2 BASIC21.66■■□□□ 1.06
TNFRSF25Q93038 CPNE7-201ENST00000268720 2657 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
TNFRSF25Q93038 AC139491.1-201ENST00000512675 1516 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
TNFRSF25Q93038 SLC35E2-201ENST00000246421 1430 ntAPPRIS P3 TSL 1 (best) BASIC21.66■■□□□ 1.06
TNFRSF25Q93038 ITGA4-202ENST00000339307 1403 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
TNFRSF25Q93038 TMEM8B-204ENST00000439587 2150 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
TNFRSF25Q93038 CD70-201ENST00000245903 913 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
TNFRSF25Q93038 TMIGD2-201ENST00000301272 1262 ntAPPRIS P3 TSL 1 (best) BASIC21.66■■□□□ 1.06
TNFRSF25Q93038 GPM6B-204ENST00000398361 1033 ntTSL 2 BASIC21.66■■□□□ 1.06
TNFRSF25Q93038 SLC25A1P4-201ENST00000567977 778 ntBASIC21.66■■□□□ 1.06
TNFRSF25Q93038 ASRGL1-211ENST00000628829 1161 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
TNFRSF25Q93038 TRA2A-201ENST00000297071 1845 ntAPPRIS P3 TSL 1 (best) BASIC21.66■■□□□ 1.06
TNFRSF25Q93038 NAT8L-202ENST00000423729 5870 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
TNFRSF25Q93038 AC004408.2-201ENST00000623613 2777 ntBASIC21.65■■□□□ 1.06
TNFRSF25Q93038 ETS1-207ENST00000531611 2134 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
TNFRSF25Q93038 ETV2-203ENST00000402764 1487 ntAPPRIS P3 TSL 1 (best) BASIC21.65■■□□□ 1.06
TNFRSF25Q93038 PTPA-204ENST00000355007 2515 ntTSL 5 BASIC21.65■■□□□ 1.06
TNFRSF25Q93038 TEAD2-202ENST00000377214 2440 ntAPPRIS ALT1 TSL 2 BASIC21.65■■□□□ 1.06
TNFRSF25Q93038 RTN4-201ENST00000317610 2333 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
TNFRSF25Q93038 RAC3-201ENST00000306897 1090 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
TNFRSF25Q93038 HBA1-201ENST00000320868 577 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
TNFRSF25Q93038 CAVIN3-203ENST00000530979 957 ntTSL 2 BASIC21.65■■□□□ 1.06
Retrieved 100 of 98,524 protein–RNA pairs in 20.7 ms