Protein–RNA interactions for Protein: Q8TF72

SHROOM3, Protein Shroom3, humanhuman

Predictions only

Length 1,996 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM3Q8TF72 SPAG16-207ENST00000432529 1250 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
SHROOM3Q8TF72 TSPY21P-201ENST00000433481 731 ntBASIC19.48■□□□□ 0.71
SHROOM3Q8TF72 FDX2-206ENST00000492239 773 ntTSL 2 BASIC19.48■□□□□ 0.71
SHROOM3Q8TF72 ADAMTS19-AS1-201ENST00000502827 786 ntTSL 4 BASIC19.48■□□□□ 0.71
SHROOM3Q8TF72 ATP6V0E1-204ENST00000519911 718 ntTSL 2 BASIC19.48■□□□□ 0.71
SHROOM3Q8TF72 KDM2B-217ENST00000543852 1188 ntTSL 5 BASIC19.48■□□□□ 0.71
SHROOM3Q8TF72 AC097662.2-201ENST00000641359 267 ntAPPRIS P1 BASIC19.48■□□□□ 0.71
SHROOM3Q8TF72 ZFP69-202ENST00000372706 2871 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
SHROOM3Q8TF72 FAM91A1-207ENST00000521166 2706 ntTSL 2 BASIC19.48■□□□□ 0.71
SHROOM3Q8TF72 SLC6A18-201ENST00000324642 2121 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
SHROOM3Q8TF72 GIT1-201ENST00000225394 3768 ntAPPRIS P3 TSL 1 (best) BASIC19.48■□□□□ 0.71
SHROOM3Q8TF72 TEAD2-202ENST00000377214 2440 ntAPPRIS ALT1 TSL 2 BASIC19.47■□□□□ 0.71
SHROOM3Q8TF72 PTH2R-204ENST00000617735 2472 ntTSL 2 BASIC19.47■□□□□ 0.71
SHROOM3Q8TF72 SYNE4-202ENST00000340477 1004 ntAPPRIS ALT2 TSL 1 (best) BASIC19.47■□□□□ 0.71
SHROOM3Q8TF72 CCT5-214ENST00000515676 1997 ntTSL 2 BASIC19.47■□□□□ 0.71
SHROOM3Q8TF72 PCCA-201ENST00000376279 2418 ntTSL 2 BASIC19.47■□□□□ 0.71
SHROOM3Q8TF72 KRT8P9-201ENST00000558927 1449 ntBASIC19.47■□□□□ 0.71
SHROOM3Q8TF72 KCNH2-202ENST00000330883 3267 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
SHROOM3Q8TF72 FSCN1P1-201ENST00000568912 1481 ntBASIC19.46■□□□□ 0.71
SHROOM3Q8TF72 HAS3-201ENST00000219322 1163 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
SHROOM3Q8TF72 AC011298.2-201ENST00000617989 482 ntBASIC19.46■□□□□ 0.71
SHROOM3Q8TF72 AEBP2-204ENST00000398864 5099 ntAPPRIS P4 TSL 1 (best) BASIC19.46■□□□□ 0.71
SHROOM3Q8TF72 TEPSIN-213ENST00000637944 1782 ntAPPRIS ALT2 TSL 5 BASIC19.46■□□□□ 0.71
SHROOM3Q8TF72 EGFR-202ENST00000342916 2239 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
SHROOM3Q8TF72 NFATC4-220ENST00000555393 2235 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
SHROOM3Q8TF72 P2RY6-203ENST00000393591 1829 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
SHROOM3Q8TF72 PDCD10-201ENST00000392750 2067 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
SHROOM3Q8TF72 MEF2B-201ENST00000409224 1683 ntTSL 2 BASIC19.46■□□□□ 0.71
SHROOM3Q8TF72 IFNLR1-202ENST00000327575 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC19.46■□□□□ 0.71
SHROOM3Q8TF72 PTBP1-220ENST00000627714 2201 ntTSL 5 BASIC19.46■□□□□ 0.71
SHROOM3Q8TF72 CD151-201ENST00000322008 1548 ntAPPRIS P2 TSL 1 (best) BASIC19.46■□□□□ 0.71
SHROOM3Q8TF72 PSMD8-210ENST00000620216 1538 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
SHROOM3Q8TF72 AC097488.1-201ENST00000507834 756 ntBASIC19.46■□□□□ 0.71
SHROOM3Q8TF72 PRSS44-201ENST00000515154 1146 ntBASIC19.46■□□□□ 0.71
SHROOM3Q8TF72 AP003071.4-201ENST00000562276 1284 ntBASIC19.46■□□□□ 0.71
SHROOM3Q8TF72 AL031600.3-201ENST00000566287 1124 ntTSL 5 BASIC19.46■□□□□ 0.71
SHROOM3Q8TF72 PDCD5-207ENST00000590247 699 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
SHROOM3Q8TF72 NTAN1-211ENST00000622833 1049 ntTSL 2 BASIC19.46■□□□□ 0.71
SHROOM3Q8TF72 NTAN1-212ENST00000624579 1115 ntTSL 2 BASIC19.46■□□□□ 0.71
SHROOM3Q8TF72 KLHL23-201ENST00000272797 2087 ntAPPRIS P1 TSL 2 BASIC19.46■□□□□ 0.71
SHROOM3Q8TF72 HOXB8-201ENST00000239144 1823 ntAPPRIS P2 TSL 2 BASIC19.46■□□□□ 0.71
SHROOM3Q8TF72 PLK5-201ENST00000334770 2106 ntAPPRIS P2 TSL 2 BASIC19.46■□□□□ 0.71
SHROOM3Q8TF72 PSMB11-201ENST00000408907 2110 ntAPPRIS P1 BASIC19.46■□□□□ 0.71
SHROOM3Q8TF72 RFC2-213ENST00000621097 1635 ntTSL 5 BASIC19.46■□□□□ 0.71
SHROOM3Q8TF72 FOXP4-205ENST00000409208 3341 ntAPPRIS P1 TSL 5 BASIC19.45■□□□□ 0.7
SHROOM3Q8TF72 PCGF6-201ENST00000337211 1950 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
SHROOM3Q8TF72 CPEB2-202ENST00000345451 2013 ntAPPRIS ALT2 TSL 1 (best) BASIC19.45■□□□□ 0.7
SHROOM3Q8TF72 CSPG5-201ENST00000264723 4080 ntAPPRIS P3 TSL 1 (best) BASIC19.45■□□□□ 0.7
SHROOM3Q8TF72 MLLT10-205ENST00000377100 1136 ntTSL 2 BASIC19.45■□□□□ 0.7
SHROOM3Q8TF72 C12orf76-208ENST00000551185 496 ntTSL 2 BASIC19.45■□□□□ 0.7
SHROOM3Q8TF72 AL590094.1-202ENST00000634619 1131 ntTSL 5 BASIC19.45■□□□□ 0.7
SHROOM3Q8TF72 C11orf80-214ENST00000532565 1948 ntAPPRIS ALT2 TSL 5 BASIC19.45■□□□□ 0.7
SHROOM3Q8TF72 NRXN1-202ENST00000342183 3315 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
SHROOM3Q8TF72 LRRC36-201ENST00000329956 2395 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
SHROOM3Q8TF72 GGT2-201ENST00000401924 2366 ntAPPRIS P1 TSL 5 BASIC19.45■□□□□ 0.7
SHROOM3Q8TF72 MRGPRG-AS1-201ENST00000420873 1818 ntTSL 2 BASIC19.45■□□□□ 0.7
SHROOM3Q8TF72 RFTN1-201ENST00000334133 2982 ntAPPRIS P2 TSL 1 (best) BASIC19.45■□□□□ 0.7
SHROOM3Q8TF72 LRRC4B-202ENST00000599957 3019 ntAPPRIS P1 TSL 3 BASIC19.45■□□□□ 0.7
SHROOM3Q8TF72 RELB-201ENST00000221452 2294 ntAPPRIS P2 TSL 1 (best) BASIC19.45■□□□□ 0.7
SHROOM3Q8TF72 KLHL2-201ENST00000226725 3134 ntAPPRIS P3 TSL 1 (best) BASIC19.45■□□□□ 0.7
SHROOM3Q8TF72 AL512353.2-201ENST00000448759 1962 ntBASIC19.45■□□□□ 0.7
SHROOM3Q8TF72 MESTP1-201ENST00000404287 994 ntBASIC19.44■□□□□ 0.7
SHROOM3Q8TF72 AL390728.5-201ENST00000428687 706 ntTSL 3 BASIC19.44■□□□□ 0.7
SHROOM3Q8TF72 FAM86C2P-201ENST00000525180 435 ntTSL 4 BASIC19.44■□□□□ 0.7
SHROOM3Q8TF72 AC004803.1-203ENST00000539259 501 ntTSL 2 BASIC19.44■□□□□ 0.7
SHROOM3Q8TF72 DGCR10-201ENST00000609839 495 ntBASIC19.44■□□□□ 0.7
SHROOM3Q8TF72 CROCCP2-205ENST00000639481 1296 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
SHROOM3Q8TF72 HOXA11-AS-205ENST00000522863 1723 ntTSL 5 BASIC19.44■□□□□ 0.7
SHROOM3Q8TF72 TWF1-201ENST00000395510 3045 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
SHROOM3Q8TF72 CDHR5-201ENST00000349570 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC19.44■□□□□ 0.7
SHROOM3Q8TF72 LINC00315-201ENST00000441947 2323 ntTSL 5 BASIC19.44■□□□□ 0.7
SHROOM3Q8TF72 KCNH2-201ENST00000262186 4286 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
SHROOM3Q8TF72 ZNF623-203ENST00000526926 2612 ntAPPRIS ALT2 TSL 2 BASIC19.44■□□□□ 0.7
SHROOM3Q8TF72 CPNE7-201ENST00000268720 2657 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
SHROOM3Q8TF72 SENP6-201ENST00000327284 2700 ntTSL 2 BASIC19.44■□□□□ 0.7
SHROOM3Q8TF72 TRA2A-201ENST00000297071 1845 ntAPPRIS P3 TSL 1 (best) BASIC19.44■□□□□ 0.7
SHROOM3Q8TF72 MARK4-211ENST00000622871 1147 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
SHROOM3Q8TF72 DECR2-212ENST00000627716 352 ntTSL 2 BASIC19.44■□□□□ 0.7
SHROOM3Q8TF72 ACHE-205ENST00000419336 1906 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
SHROOM3Q8TF72 JAKMIP1-208ENST00000637373 1362 ntTSL 5 BASIC19.44■□□□□ 0.7
SHROOM3Q8TF72 HDAC4-201ENST00000345617 8976 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
SHROOM3Q8TF72 NFKBIL1-201ENST00000376145 1401 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
SHROOM3Q8TF72 MTMR9LP-203ENST00000426597 1545 ntBASIC19.44■□□□□ 0.7
SHROOM3Q8TF72 TBC1D3P2-202ENST00000577902 1649 ntBASIC19.44■□□□□ 0.7
SHROOM3Q8TF72 RIPK2-201ENST00000220751 2584 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
SHROOM3Q8TF72 NDRG2-227ENST00000554143 1980 ntAPPRIS ALT1 TSL 2 BASIC19.43■□□□□ 0.7
SHROOM3Q8TF72 UNC93B2-201ENST00000285383 730 ntBASIC19.43■□□□□ 0.7
SHROOM3Q8TF72 AP001412.1-201ENST00000608405 714 ntBASIC19.43■□□□□ 0.7
SHROOM3Q8TF72 TRIM74-201ENST00000285805 1350 ntAPPRIS P2 TSL 1 (best) BASIC19.43■□□□□ 0.7
SHROOM3Q8TF72 TRIM73-201ENST00000323819 1358 ntAPPRIS P2 TSL 1 (best) BASIC19.43■□□□□ 0.7
SHROOM3Q8TF72 APIP-201ENST00000395787 1366 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
SHROOM3Q8TF72 VAV1-201ENST00000304076 2825 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
SHROOM3Q8TF72 BTNL9-210ENST00000515271 1444 ntTSL 2 BASIC19.43■□□□□ 0.7
SHROOM3Q8TF72 ACY1-201ENST00000404366 1473 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
SHROOM3Q8TF72 PFN2-203ENST00000452853 1780 ntAPPRIS ALT1 TSL 1 (best) BASIC19.43■□□□□ 0.7
SHROOM3Q8TF72 CAPS-201ENST00000452990 1789 ntTSL 5 BASIC19.43■□□□□ 0.7
SHROOM3Q8TF72 PPM1B-201ENST00000282412 2606 ntAPPRIS P4 TSL 1 (best) BASIC19.43■□□□□ 0.7
SHROOM3Q8TF72 PLIN2-201ENST00000276914 1972 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
SHROOM3Q8TF72 OCSTAMP-201ENST00000279028 2043 ntAPPRIS P1 TSL 5 BASIC19.43■□□□□ 0.7
SHROOM3Q8TF72 WNT1-201ENST00000293549 1185 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Retrieved 100 of 98,524 protein–RNA pairs in 29.1 ms