Protein–RNA interactions for Protein: Q8IY92

SLX4, Structure-specific endonuclease subunit SLX4, humanhuman

Predictions only

Length 1,834 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLX4Q8IY92 AL121832.1-201ENST00000615180 677 ntTSL 3 BASIC23.28■■□□□ 1.32
SLX4Q8IY92 AC073188.6-202ENST00000616616 2281 ntTSL 1 (best) BASIC23.28■■□□□ 1.32
SLX4Q8IY92 MAP3K7CL-206ENST00000399928 1904 ntAPPRIS P1 TSL 1 (best) BASIC23.28■■□□□ 1.32
SLX4Q8IY92 RPS6KB1-204ENST00000443572 1913 ntTSL 2 BASIC23.28■■□□□ 1.32
SLX4Q8IY92 KREMEN2-206ENST00000575885 1798 ntTSL 2 BASIC23.28■■□□□ 1.32
SLX4Q8IY92 STXBP6-203ENST00000419632 1970 ntAPPRIS P1 TSL 1 (best) BASIC23.27■■□□□ 1.32
SLX4Q8IY92 TMEM109-202ENST00000536171 1959 ntAPPRIS P1 TSL 2 BASIC23.27■■□□□ 1.32
SLX4Q8IY92 LAT-204ENST00000395461 1448 ntAPPRIS ALT2 TSL 1 (best) BASIC23.27■■□□□ 1.32
SLX4Q8IY92 LPAR2-203ENST00000586703 1823 ntAPPRIS P1 TSL 1 (best) BASIC23.27■■□□□ 1.32
SLX4Q8IY92 AC093459.1-201ENST00000444567 481 ntTSL 3 BASIC23.27■■□□□ 1.32
SLX4Q8IY92 PCDHB12-202ENST00000622978 2093 ntTSL 2 BASIC23.27■■□□□ 1.32
SLX4Q8IY92 FAM129C-203ENST00000449408 2004 ntAPPRIS ALT2 TSL 2 BASIC23.27■■□□□ 1.32
SLX4Q8IY92 CABP4-202ENST00000438189 1426 ntTSL 1 (best) BASIC23.27■■□□□ 1.32
SLX4Q8IY92 SDHAP1-207ENST00000440850 2000 ntBASIC23.27■■□□□ 1.31
SLX4Q8IY92 FAM239B-201ENST00000381106 1099 ntTSL 2 BASIC23.26■■□□□ 1.31
SLX4Q8IY92 AP000593.1-201ENST00000393668 712 ntBASIC23.26■■□□□ 1.31
SLX4Q8IY92 EXOSC3-202ENST00000396521 768 ntTSL 2 BASIC23.26■■□□□ 1.31
SLX4Q8IY92 MCCD1P1-208ENST00000445732 328 ntBASIC23.26■■□□□ 1.31
SLX4Q8IY92 AC104819.1-201ENST00000504587 486 ntBASIC23.26■■□□□ 1.31
SLX4Q8IY92 MIR2117HG-201ENST00000588060 506 ntTSL 4 BASIC23.26■■□□□ 1.31
SLX4Q8IY92 IER5L-201ENST00000372491 2711 ntAPPRIS P1 BASIC23.26■■□□□ 1.31
SLX4Q8IY92 TFEB-211ENST00000420312 1996 ntTSL 5 BASIC23.26■■□□□ 1.31
SLX4Q8IY92 PCCB-216ENST00000483687 1727 ntTSL 3 BASIC23.26■■□□□ 1.31
SLX4Q8IY92 CHTOP-204ENST00000368694 2096 ntAPPRIS P3 TSL 1 (best) BASIC23.26■■□□□ 1.31
SLX4Q8IY92 TANGO2-217ENST00000456048 2439 ntTSL 2 BASIC23.26■■□□□ 1.31
SLX4Q8IY92 ANKRD13D-216ENST00000514166 2138 ntTSL 2 BASIC23.26■■□□□ 1.31
SLX4Q8IY92 AC096719.1-201ENST00000510705 1874 ntTSL 5 BASIC23.26■■□□□ 1.31
SLX4Q8IY92 AL391422.3-201ENST00000603791 2761 ntBASIC23.26■■□□□ 1.31
SLX4Q8IY92 HBQ1-201ENST00000199708 536 ntAPPRIS P1 TSL 1 (best) BASIC23.26■■□□□ 1.31
SLX4Q8IY92 CRELD2-202ENST00000403427 1242 ntTSL 1 (best) BASIC23.26■■□□□ 1.31
SLX4Q8IY92 PLPP5-214ENST00000531823 875 ntTSL 3 BASIC23.26■■□□□ 1.31
SLX4Q8IY92 SRP9-203ENST00000366839 1596 ntTSL 1 (best) BASIC23.26■■□□□ 1.31
SLX4Q8IY92 SPAG16-202ENST00000331683 2177 ntAPPRIS P1 TSL 1 (best) BASIC23.25■■□□□ 1.31
SLX4Q8IY92 KCNQ1-202ENST00000335475 2159 ntAPPRIS ALT2 TSL 1 (best) BASIC23.25■■□□□ 1.31
SLX4Q8IY92 CDK10-208ENST00000505473 1424 ntTSL 1 (best) BASIC23.25■■□□□ 1.31
SLX4Q8IY92 AC002310.5-201ENST00000569360 1515 ntAPPRIS P1 TSL 2 BASIC23.25■■□□□ 1.31
SLX4Q8IY92 TMEM14A-201ENST00000211314 992 ntAPPRIS P1 TSL 1 (best) BASIC23.25■■□□□ 1.31
SLX4Q8IY92 RPP38-203ENST00000378202 1030 ntAPPRIS P1 TSL 1 (best) BASIC23.25■■□□□ 1.31
SLX4Q8IY92 RPS14-203ENST00000407193 784 ntAPPRIS P1 TSL 2 BASIC23.25■■□□□ 1.31
SLX4Q8IY92 C7orf34-201ENST00000409607 766 ntAPPRIS P2 TSL 1 (best) BASIC23.25■■□□□ 1.31
SLX4Q8IY92 EEF1E1-202ENST00000429723 562 ntTSL 3 BASIC23.25■■□□□ 1.31
SLX4Q8IY92 AC007834.1-201ENST00000446473 728 ntTSL 3 BASIC23.25■■□□□ 1.31
SLX4Q8IY92 CCDC61-201ENST00000536603 1282 ntAPPRIS ALT2 TSL 1 (best) BASIC23.25■■□□□ 1.31
SLX4Q8IY92 C14orf144-201ENST00000553757 537 ntTSL 4 BASIC23.25■■□□□ 1.31
SLX4Q8IY92 TEN1-204ENST00000588202 862 ntTSL 3 BASIC23.25■■□□□ 1.31
SLX4Q8IY92 FCER2-201ENST00000346664 1596 ntAPPRIS P2 TSL 1 (best) BASIC23.25■■□□□ 1.31
SLX4Q8IY92 FCER2-205ENST00000597921 1560 ntAPPRIS P2 TSL 1 (best) BASIC23.25■■□□□ 1.31
SLX4Q8IY92 ZNF513-202ENST00000407879 2077 ntTSL 1 (best) BASIC23.25■■□□□ 1.31
SLX4Q8IY92 WRNIP1-204ENST00000380773 2670 ntAPPRIS P1 TSL 1 (best) BASIC23.25■■□□□ 1.31
SLX4Q8IY92 CD19-206ENST00000567541 1707 ntAPPRIS ALT2 TSL 1 (best) BASIC23.25■■□□□ 1.31
SLX4Q8IY92 ZNF852-201ENST00000436261 1968 ntAPPRIS P1 TSL 2 BASIC23.25■■□□□ 1.31
SLX4Q8IY92 KRT13-202ENST00000336861 1673 ntAPPRIS ALT2 TSL 1 (best) BASIC23.24■■□□□ 1.31
SLX4Q8IY92 HHIPL1-202ENST00000357223 2241 ntTSL 1 (best) BASIC23.24■■□□□ 1.31
SLX4Q8IY92 FCN3-201ENST00000270879 1030 ntAPPRIS P4 TSL 1 (best) BASIC23.24■■□□□ 1.31
SLX4Q8IY92 ATP5J-201ENST00000284971 614 ntAPPRIS P1 TSL 1 (best) BASIC23.24■■□□□ 1.31
SLX4Q8IY92 AKR1C7P-201ENST00000305623 895 ntBASIC23.24■■□□□ 1.31
SLX4Q8IY92 FCN3-202ENST00000354982 997 ntAPPRIS ALT2 TSL 1 (best) BASIC23.24■■□□□ 1.31
SLX4Q8IY92 SPAG16-207ENST00000432529 1250 ntTSL 1 (best) BASIC23.24■■□□□ 1.31
SLX4Q8IY92 PCAT7-201ENST00000452148 1164 ntTSL 2 BASIC23.24■■□□□ 1.31
SLX4Q8IY92 AL611929.1-201ENST00000457340 449 ntTSL 3 BASIC23.24■■□□□ 1.31
SLX4Q8IY92 PQLC2L-205ENST00000461040 563 ntAPPRIS ALT2 TSL 3 BASIC23.24■■□□□ 1.31
SLX4Q8IY92 BET1L-206ENST00000486280 665 ntTSL 3 BASIC23.24■■□□□ 1.31
SLX4Q8IY92 ORAOV1-210ENST00000539414 817 ntAPPRIS ALT1 TSL 2 BASIC23.24■■□□□ 1.31
SLX4Q8IY92 AC027796.4-201ENST00000575741 874 ntTSL 5 BASIC23.24■■□□□ 1.31
SLX4Q8IY92 TMEM70-201ENST00000312184 2018 ntAPPRIS P1 TSL 1 (best) BASIC23.24■■□□□ 1.31
SLX4Q8IY92 EEF1D-204ENST00000423316 2378 ntAPPRIS P4 TSL 5 BASIC23.24■■□□□ 1.31
SLX4Q8IY92 VPS37D-202ENST00000451519 1303 ntTSL 5 BASIC23.24■■□□□ 1.31
SLX4Q8IY92 LINC00960-201ENST00000463183 1333 ntTSL 1 (best) BASIC23.24■■□□□ 1.31
SLX4Q8IY92 ACOT2-201ENST00000238651 1774 ntTSL 1 (best) BASIC23.24■■□□□ 1.31
SLX4Q8IY92 THTPA-202ENST00000404535 1779 ntAPPRIS P1 TSL 2 BASIC23.24■■□□□ 1.31
SLX4Q8IY92 CRYZL1-203ENST00000381540 1482 ntTSL 2 BASIC23.24■■□□□ 1.31
SLX4Q8IY92 OTUB1-210ENST00000541478 1803 ntTSL 5 BASIC23.24■■□□□ 1.31
SLX4Q8IY92 AC233702.3-201ENST00000578656 1387 ntBASIC23.24■■□□□ 1.31
SLX4Q8IY92 SAXO1-202ENST00000380534 2099 ntAPPRIS P3 TSL 1 (best) BASIC23.24■■□□□ 1.31
SLX4Q8IY92 C17orf58-204ENST00000580729 2065 ntTSL 5 BASIC23.24■■□□□ 1.31
SLX4Q8IY92 ATP6V0C-201ENST00000330398 1175 ntAPPRIS P1 TSL 1 (best) BASIC23.24■■□□□ 1.31
SLX4Q8IY92 CT47A4-201ENST00000415858 1298 ntAPPRIS P1 TSL 1 (best) BASIC23.24■■□□□ 1.31
SLX4Q8IY92 CT47A9-201ENST00000417256 1298 ntAPPRIS P1 TSL 1 (best) BASIC23.24■■□□□ 1.31
SLX4Q8IY92 CT47A6-201ENST00000419194 1298 ntAPPRIS P1 TSL 5 BASIC23.24■■□□□ 1.31
SLX4Q8IY92 CT47A10-201ENST00000430448 1298 ntAPPRIS P1 TSL 1 (best) BASIC23.24■■□□□ 1.31
SLX4Q8IY92 CT47A5-201ENST00000439466 1298 ntAPPRIS P1 TSL 1 (best) BASIC23.24■■□□□ 1.31
SLX4Q8IY92 CT47A3-201ENST00000441330 1298 ntAPPRIS P1 TSL 1 (best) BASIC23.24■■□□□ 1.31
SLX4Q8IY92 CT47A8-201ENST00000457977 1298 ntAPPRIS P1 TSL 1 (best) BASIC23.24■■□□□ 1.31
SLX4Q8IY92 CT47A2-201ENST00000458218 1298 ntAPPRIS P1 TSL 1 (best) BASIC23.24■■□□□ 1.31
SLX4Q8IY92 AC079031.1-201ENST00000542627 1035 ntTSL 3 BASIC23.24■■□□□ 1.31
SLX4Q8IY92 AL121912.1-201ENST00000603683 238 ntBASIC23.24■■□□□ 1.31
SLX4Q8IY92 AL121772.3-201ENST00000610840 674 ntBASIC23.24■■□□□ 1.31
SLX4Q8IY92 LITAF-220ENST00000620789 692 ntTSL 5 BASIC23.24■■□□□ 1.31
SLX4Q8IY92 C2orf72-201ENST00000373640 3657 ntAPPRIS P1 TSL 2 BASIC23.23■■□□□ 1.31
SLX4Q8IY92 FAM182B-201ENST00000376403 1681 ntAPPRIS P5 TSL 1 (best) BASIC23.23■■□□□ 1.31
SLX4Q8IY92 RPL7-202ENST00000396465 1308 ntTSL 3 BASIC23.23■■□□□ 1.31
SLX4Q8IY92 ABHD14B-204ENST00000461108 1397 ntTSL 2 BASIC23.23■■□□□ 1.31
SLX4Q8IY92 ERCC2-205ENST00000485403 1538 ntTSL 1 (best) BASIC23.23■■□□□ 1.31
SLX4Q8IY92 KLK12-201ENST00000250351 882 ntAPPRIS P4 TSL 5 BASIC23.23■■□□□ 1.31
SLX4Q8IY92 EXOSC4-201ENST00000316052 887 ntAPPRIS P1 TSL 1 (best) BASIC23.23■■□□□ 1.31
SLX4Q8IY92 C1orf43-204ENST00000368518 1278 ntTSL 1 (best) BASIC23.23■■□□□ 1.31
SLX4Q8IY92 SBDSP1-202ENST00000423945 618 ntTSL 3 BASIC23.23■■□□□ 1.31
SLX4Q8IY92 GRAMD4P1-201ENST00000435181 1110 ntBASIC23.23■■□□□ 1.31
SLX4Q8IY92 AL133343.2-201ENST00000457213 370 ntTSL 3 BASIC23.23■■□□□ 1.31
SLX4Q8IY92 AC091304.2-201ENST00000564639 760 ntBASIC23.23■■□□□ 1.31
Retrieved 100 of 98,524 protein–RNA pairs in 24.1 ms