Protein–RNA interactions for Protein: Q6UWN0

LYPD4, Ly6/PLAUR domain-containing protein 4, humanhuman

Predictions only

Length 246 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LYPD4Q6UWN0 MAN1A1-201ENST00000368468 5014 ntAPPRIS P1 TSL 2 BASIC17.11■□□□□ 0.33
LYPD4Q6UWN0 SMARCC2-201ENST00000267064 4076 ntAPPRIS P4 TSL 1 (best) BASIC17.11■□□□□ 0.33
LYPD4Q6UWN0 PCDHAC2-201ENST00000289269 5963 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
LYPD4Q6UWN0 NFS1-214ENST00000541387 1436 ntTSL 2 BASIC17.11■□□□□ 0.33
LYPD4Q6UWN0 TACO1-201ENST00000258975 1469 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
LYPD4Q6UWN0 ANKS3-201ENST00000304283 2662 ntAPPRIS P1 TSL 2 BASIC17.11■□□□□ 0.33
LYPD4Q6UWN0 MICU3-201ENST00000318063 3992 ntAPPRIS P2 TSL 1 (best) BASIC17.11■□□□□ 0.33
LYPD4Q6UWN0 SLC35F3-201ENST00000366617 2762 ntAPPRIS ALT1 TSL 1 (best) BASIC17.11■□□□□ 0.33
LYPD4Q6UWN0 KIFC3-201ENST00000379655 3427 ntAPPRIS P3 TSL 1 (best) BASIC17.11■□□□□ 0.33
LYPD4Q6UWN0 FOXI3-201ENST00000428390 2804 ntAPPRIS P1 TSL 3 BASIC17.11■□□□□ 0.33
LYPD4Q6UWN0 TSPAN3-210ENST00000561277 1592 ntTSL 5 BASIC17.11■□□□□ 0.33
LYPD4Q6UWN0 ARNT-212ENST00000515192 2892 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
LYPD4Q6UWN0 PDLIM4-201ENST00000253754 2282 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
LYPD4Q6UWN0 ANKS3-202ENST00000446014 2265 ntTSL 5 BASIC17.1■□□□□ 0.33
LYPD4Q6UWN0 VOPP1-201ENST00000285279 2962 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
LYPD4Q6UWN0 LINC00461-203ENST00000504246 2300 ntTSL 2 BASIC17.1■□□□□ 0.33
LYPD4Q6UWN0 MCCC1-215ENST00000629669 2316 ntTSL 5 BASIC17.1■□□□□ 0.33
LYPD4Q6UWN0 SLC16A13-201ENST00000308027 1748 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
LYPD4Q6UWN0 AC009113.1-201ENST00000570267 2443 ntBASIC17.1■□□□□ 0.33
LYPD4Q6UWN0 AC018470.1-201ENST00000624790 3129 ntBASIC17.1■□□□□ 0.33
LYPD4Q6UWN0 SNRPN-207ENST00000554227 1763 ntTSL 5 BASIC17.1■□□□□ 0.33
LYPD4Q6UWN0 IRX1P1-201ENST00000438849 1838 ntBASIC17.1■□□□□ 0.33
LYPD4Q6UWN0 IL10RB-201ENST00000290200 1963 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
LYPD4Q6UWN0 COPS7A-204ENST00000534947 2034 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
LYPD4Q6UWN0 ADAMTS9-202ENST00000459780 2871 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
LYPD4Q6UWN0 GLI4-202ENST00000344692 1012 ntTSL 2 BASIC17.1■□□□□ 0.33
LYPD4Q6UWN0 MRPS26-201ENST00000380325 1127 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
LYPD4Q6UWN0 NPY-202ENST00000405982 565 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
LYPD4Q6UWN0 UNC93B6-201ENST00000525262 1143 ntTSL 5 BASIC17.1■□□□□ 0.33
LYPD4Q6UWN0 CCDC27-201ENST00000294600 2176 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
LYPD4Q6UWN0 GXYLT1-202ENST00000398675 7497 ntAPPRIS P4 TSL 1 (best) BASIC17.1■□□□□ 0.33
LYPD4Q6UWN0 CLMP-201ENST00000448775 5072 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
LYPD4Q6UWN0 GAREM2-201ENST00000401533 4161 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
LYPD4Q6UWN0 LRRC36-201ENST00000329956 2395 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
LYPD4Q6UWN0 HAUS4-204ENST00000490506 1447 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
LYPD4Q6UWN0 SHISA5-220ENST00000619810 2385 ntTSL 2 BASIC17.1■□□□□ 0.33
LYPD4Q6UWN0 PTTG1IP-204ENST00000445724 2497 ntTSL 2 BASIC17.1■□□□□ 0.33
LYPD4Q6UWN0 CLEC10A-201ENST00000254868 1797 ntAPPRIS P3 TSL 1 (best) BASIC17.1■□□□□ 0.33
LYPD4Q6UWN0 LONRF1-208ENST00000533751 3043 ntTSL 5 BASIC17.1■□□□□ 0.33
LYPD4Q6UWN0 SPON2-203ENST00000431380 1802 ntAPPRIS P1 TSL 5 BASIC17.1■□□□□ 0.33
LYPD4Q6UWN0 USP39-202ENST00000409025 1946 ntTSL 5 BASIC17.09■□□□□ 0.33
LYPD4Q6UWN0 PSAP-205ENST00000610929 1969 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
LYPD4Q6UWN0 AC073107.1-201ENST00000633579 1962 ntTSL 5 BASIC17.09■□□□□ 0.33
LYPD4Q6UWN0 AIRE-201ENST00000291582 2257 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
LYPD4Q6UWN0 TMC6-203ENST00000392467 2833 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
LYPD4Q6UWN0 KCNC4-203ENST00000413138 3018 ntAPPRIS ALT2 TSL 5 BASIC17.09■□□□□ 0.33
LYPD4Q6UWN0 TLE3-214ENST00000558939 6004 ntAPPRIS P4 TSL 1 (best) BASIC17.09■□□□□ 0.33
LYPD4Q6UWN0 GDAP1L1-202ENST00000372952 722 ntTSL 5 BASIC17.09■□□□□ 0.33
LYPD4Q6UWN0 AC069152.1-201ENST00000438030 544 ntBASIC17.09■□□□□ 0.33
LYPD4Q6UWN0 AC008443.1-203ENST00000505151 886 ntTSL 2 BASIC17.09■□□□□ 0.33
LYPD4Q6UWN0 KRT18P16-201ENST00000510337 1294 ntBASIC17.09■□□□□ 0.33
LYPD4Q6UWN0 GNAO1-211ENST00000570235 568 ntTSL 2 BASIC17.09■□□□□ 0.33
LYPD4Q6UWN0 EML2-AS1-202ENST00000591087 838 ntTSL 3 BASIC17.09■□□□□ 0.33
LYPD4Q6UWN0 NAT14-204ENST00000591590 1011 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
LYPD4Q6UWN0 AC010646.1-201ENST00000594059 515 ntAPPRIS P1 TSL 4 BASIC17.09■□□□□ 0.33
LYPD4Q6UWN0 SYNGR4-202ENST00000595322 533 ntTSL 3 BASIC17.09■□□□□ 0.33
LYPD4Q6UWN0 AC008687.6-201ENST00000596318 630 ntBASIC17.09■□□□□ 0.33
LYPD4Q6UWN0 AC104771.1-201ENST00000603335 964 ntBASIC17.09■□□□□ 0.33
LYPD4Q6UWN0 FEZF1-202ENST00000427185 1368 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
LYPD4Q6UWN0 GCOM1-201ENST00000380568 1516 ntAPPRIS ALT2 TSL 2 BASIC17.09■□□□□ 0.33
LYPD4Q6UWN0 TMEM175-220ENST00000515740 1514 ntTSL 3 BASIC17.09■□□□□ 0.33
LYPD4Q6UWN0 ST6GALNAC4-201ENST00000335791 1691 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
LYPD4Q6UWN0 HNRNPLL-206ENST00000410076 1687 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
LYPD4Q6UWN0 FGF17-201ENST00000359441 1714 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
LYPD4Q6UWN0 ZNF302-215ENST00000627982 1723 ntAPPRIS ALT2 TSL 5 BASIC17.09■□□□□ 0.33
LYPD4Q6UWN0 GDPD1-201ENST00000284116 1821 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
LYPD4Q6UWN0 TXNRD3-205ENST00000640797 1824 ntAPPRIS ALT2 TSL 2 BASIC17.09■□□□□ 0.33
LYPD4Q6UWN0 GCDH-216ENST00000591470 1867 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
LYPD4Q6UWN0 CDHR1-201ENST00000332904 2694 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
LYPD4Q6UWN0 NPTX2-201ENST00000265634 2700 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
LYPD4Q6UWN0 PODN-203ENST00000395871 2744 ntTSL 5 BASIC17.09■□□□□ 0.33
LYPD4Q6UWN0 PKP3-201ENST00000331563 2809 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
LYPD4Q6UWN0 POMT2-201ENST00000261534 4876 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
LYPD4Q6UWN0 MYO9A-214ENST00000566885 5111 ntTSL 1 (best) BASIC17.08■□□□□ 0.33
LYPD4Q6UWN0 GDF7-201ENST00000272224 9749 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
LYPD4Q6UWN0 CRMP1-202ENST00000397890 2911 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
LYPD4Q6UWN0 B4GALT4-202ENST00000393765 2459 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
LYPD4Q6UWN0 CPEB2-207ENST00000507071 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC17.08■□□□□ 0.33
LYPD4Q6UWN0 ENOPH1-201ENST00000273920 2025 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
LYPD4Q6UWN0 SYTL1-201ENST00000318074 1900 ntTSL 2 BASIC17.08■□□□□ 0.33
LYPD4Q6UWN0 DAG1-221ENST00000541308 5676 ntAPPRIS P1 TSL 5 BASIC17.08■□□□□ 0.33
LYPD4Q6UWN0 SLC35E1-208ENST00000595753 5099 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
LYPD4Q6UWN0 AKT1-211ENST00000554848 1595 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
LYPD4Q6UWN0 AL390860.1-201ENST00000449298 1541 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
LYPD4Q6UWN0 PTGER3-203ENST00000354608 1470 ntAPPRIS ALT2 TSL 5 BASIC17.08■□□□□ 0.32
LYPD4Q6UWN0 QTRT1-201ENST00000250237 1317 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
LYPD4Q6UWN0 SDHC-201ENST00000342751 1127 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
LYPD4Q6UWN0 SBK2-201ENST00000344158 1056 ntAPPRIS P1 TSL 2 BASIC17.08■□□□□ 0.32
LYPD4Q6UWN0 NXNL2-201ENST00000375854 805 ntAPPRIS P1 TSL 5 BASIC17.08■□□□□ 0.32
LYPD4Q6UWN0 SBK2-202ENST00000413299 1085 ntAPPRIS P1 TSL 5 BASIC17.08■□□□□ 0.32
LYPD4Q6UWN0 NCF1B-202ENST00000432102 930 ntTSL 2 BASIC17.08■□□□□ 0.32
LYPD4Q6UWN0 EPHA5-AS1-202ENST00000509473 1177 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
LYPD4Q6UWN0 AC092666.2-201ENST00000613287 246 ntBASIC17.08■□□□□ 0.32
LYPD4Q6UWN0 INO80E-214ENST00000620599 515 ntTSL 2 BASIC17.08■□□□□ 0.32
LYPD4Q6UWN0 ZNF668-208ENST00000538906 2865 ntAPPRIS P1 TSL 2 BASIC17.08■□□□□ 0.32
LYPD4Q6UWN0 PLEKHG5-201ENST00000340850 4715 ntAPPRIS P3 TSL 5 BASIC17.08■□□□□ 0.32
LYPD4Q6UWN0 PLEKHG5-211ENST00000535355 4725 ntAPPRIS ALT2 TSL 2 BASIC17.08■□□□□ 0.32
LYPD4Q6UWN0 CDK5R1-201ENST00000313401 4325 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
LYPD4Q6UWN0 CCDC17-209ENST00000528266 2181 ntAPPRIS P3 TSL 2 BASIC17.08■□□□□ 0.32
LYPD4Q6UWN0 YY1AP1-213ENST00000405763 2011 ntAPPRIS ALT2 TSL 1 (best) BASIC17.08■□□□□ 0.32
Retrieved 100 of 98,524 protein–RNA pairs in 21.5 ms