Protein–RNA interactions for Protein: Q5NE16

CTSL3P, Putative inactive cathepsin L-like protein CTSL3P, humanhuman

Predictions only

Length 218 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTSL3PQ5NE16 AC011298.2-201ENST00000617989 482 ntBASIC18.81■□□□□ 0.6
CTSL3PQ5NE16 BPIFB3-201ENST00000375494 1454 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
CTSL3PQ5NE16 VBP1-201ENST00000286428 1686 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
CTSL3PQ5NE16 HCCS-201ENST00000321143 2277 ntAPPRIS P1 TSL 2 BASIC18.81■□□□□ 0.6
CTSL3PQ5NE16 SYBU-232ENST00000533171 2498 ntAPPRIS ALT2 TSL 2 BASIC18.81■□□□□ 0.6
CTSL3PQ5NE16 HCG18-235ENST00000426882 4862 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
CTSL3PQ5NE16 GDPD1-201ENST00000284116 1821 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
CTSL3PQ5NE16 DLGAP4-201ENST00000339266 5016 ntAPPRIS ALT2 TSL 5 BASIC18.81■□□□□ 0.6
CTSL3PQ5NE16 GALNT8-202ENST00000433855 5977 ntTSL 2 BASIC18.81■□□□□ 0.6
CTSL3PQ5NE16 RFTN1-201ENST00000334133 2982 ntAPPRIS P2 TSL 1 (best) BASIC18.81■□□□□ 0.6
CTSL3PQ5NE16 GFI1-201ENST00000294702 2784 ntAPPRIS P1 TSL 2 BASIC18.81■□□□□ 0.6
CTSL3PQ5NE16 CHMP4A-201ENST00000347519 1393 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
CTSL3PQ5NE16 PTGIR-201ENST00000291294 2107 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
CTSL3PQ5NE16 DDRGK1-201ENST00000354488 1306 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
CTSL3PQ5NE16 SMN1-209ENST00000514951 1308 ntTSL 2 BASIC18.8■□□□□ 0.6
CTSL3PQ5NE16 SPTBN4-201ENST00000338932 8686 ntAPPRIS ALT1 TSL 5 BASIC18.8■□□□□ 0.6
CTSL3PQ5NE16 EGFR-202ENST00000342916 2239 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
CTSL3PQ5NE16 GRK6-201ENST00000355472 2939 ntAPPRIS P3 TSL 1 (best) BASIC18.8■□□□□ 0.6
CTSL3PQ5NE16 PGAM1-201ENST00000334828 1830 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
CTSL3PQ5NE16 WDR74-201ENST00000278856 1289 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
CTSL3PQ5NE16 POMC-202ENST00000380794 1295 ntAPPRIS P1 TSL 2 BASIC18.8■□□□□ 0.6
CTSL3PQ5NE16 AL359747.1-201ENST00000442370 536 ntTSL 2 BASIC18.8■□□□□ 0.6
CTSL3PQ5NE16 CXCL2-202ENST00000508487 1218 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
CTSL3PQ5NE16 AL049780.2-201ENST00000556236 367 ntTSL 3 BASIC18.8■□□□□ 0.6
CTSL3PQ5NE16 AC005786.3-201ENST00000589360 565 ntTSL 3 BASIC18.8■□□□□ 0.6
CTSL3PQ5NE16 Z99916.2-201ENST00000604037 246 ntBASIC18.8■□□□□ 0.6
CTSL3PQ5NE16 MIR6786-201ENST00000616843 113 ntBASIC18.8■□□□□ 0.6
CTSL3PQ5NE16 AC130371.2-201ENST00000619443 611 ntBASIC18.8■□□□□ 0.6
CTSL3PQ5NE16 SYN2-206ENST00000621198 2674 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
CTSL3PQ5NE16 TRAK2-202ENST00000430254 1436 ntTSL 2 BASIC18.8■□□□□ 0.6
CTSL3PQ5NE16 NR2F1-205ENST00000615873 1427 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
CTSL3PQ5NE16 TMEM74-201ENST00000297459 1741 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
CTSL3PQ5NE16 RHOT1-202ENST00000354266 2919 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
CTSL3PQ5NE16 DNAJC28-204ENST00000617313 2237 ntAPPRIS P1 TSL 5 BASIC18.8■□□□□ 0.6
CTSL3PQ5NE16 ASB6-202ENST00000277459 2180 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
CTSL3PQ5NE16 SCFD2-204ENST00000611795 1320 ntTSL 5 BASIC18.79■□□□□ 0.6
CTSL3PQ5NE16 NOTCH2NL-204ENST00000579793 1954 ntAPPRIS ALT2 TSL 2 BASIC18.79■□□□□ 0.6
CTSL3PQ5NE16 USP36-203ENST00000542802 6063 ntAPPRIS P2 TSL 1 (best) BASIC18.79■□□□□ 0.6
CTSL3PQ5NE16 ZKSCAN7-205ENST00000426540 2791 ntAPPRIS P1 TSL 2 BASIC18.79■□□□□ 0.6
CTSL3PQ5NE16 AP003356.1-202ENST00000517910 2770 ntTSL 2 BASIC18.79■□□□□ 0.6
CTSL3PQ5NE16 CDKN2C-201ENST00000262662 2904 ntAPPRIS P1 TSL 2 BASIC18.79■□□□□ 0.6
CTSL3PQ5NE16 GAL3ST1-206ENST00000406955 1635 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
CTSL3PQ5NE16 ASNS-206ENST00000437628 1638 ntTSL 2 BASIC18.79■□□□□ 0.6
CTSL3PQ5NE16 LIN54-209ENST00000510557 2257 ntTSL 2 BASIC18.79■□□□□ 0.6
CTSL3PQ5NE16 RIPK2-201ENST00000220751 2584 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
CTSL3PQ5NE16 NT5C1A-201ENST00000235628 1107 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
CTSL3PQ5NE16 IL17C-201ENST00000244241 1044 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
CTSL3PQ5NE16 LIME1-201ENST00000309546 1178 ntAPPRIS P3 TSL 1 (best) BASIC18.79■□□□□ 0.6
CTSL3PQ5NE16 LGALS7B-201ENST00000314980 483 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
CTSL3PQ5NE16 LGALS7-201ENST00000378626 466 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
CTSL3PQ5NE16 AC007040.1-201ENST00000416229 477 ntTSL 3 BASIC18.79■□□□□ 0.6
CTSL3PQ5NE16 KDM2B-217ENST00000543852 1188 ntTSL 5 BASIC18.79■□□□□ 0.6
CTSL3PQ5NE16 TMEM235-204ENST00000551068 1187 ntAPPRIS P1 TSL 5 BASIC18.79■□□□□ 0.6
CTSL3PQ5NE16 AC089999.2-201ENST00000552525 248 ntTSL 3 BASIC18.79■□□□□ 0.6
CTSL3PQ5NE16 AL049637.2-201ENST00000641778 930 ntBASIC18.79■□□□□ 0.6
CTSL3PQ5NE16 NUBP2-201ENST00000262302 1413 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
CTSL3PQ5NE16 STRBP-201ENST00000348403 3337 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
CTSL3PQ5NE16 GPR137-204ENST00000438980 1596 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
CTSL3PQ5NE16 WNT6-201ENST00000233948 1703 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
CTSL3PQ5NE16 PCCB-216ENST00000483687 1727 ntTSL 3 BASIC18.79■□□□□ 0.6
CTSL3PQ5NE16 RAB11FIP4-211ENST00000621161 8628 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
CTSL3PQ5NE16 FUCA1-201ENST00000374479 2047 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
CTSL3PQ5NE16 YY1AP1-213ENST00000405763 2011 ntAPPRIS ALT2 TSL 1 (best) BASIC18.79■□□□□ 0.6
CTSL3PQ5NE16 PARS2-201ENST00000371279 2347 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
CTSL3PQ5NE16 SPATA20-226ENST00000619622 2769 ntAPPRIS P2 TSL 5 BASIC18.79■□□□□ 0.6
CTSL3PQ5NE16 SCARF2-202ENST00000622235 3232 ntAPPRIS ALT2 TSL 1 (best) BASIC18.79■□□□□ 0.6
CTSL3PQ5NE16 NKX1-2-201ENST00000451024 3364 ntAPPRIS P1 TSL 5 BASIC18.79■□□□□ 0.6
CTSL3PQ5NE16 TRIM47-201ENST00000254816 2266 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
CTSL3PQ5NE16 ABCB9-202ENST00000344275 2394 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
CTSL3PQ5NE16 TXNL1-211ENST00000590954 1339 ntAPPRIS P1 TSL 2 BASIC18.78■□□□□ 0.6
CTSL3PQ5NE16 MEF2A-202ENST00000354410 5824 ntAPPRIS P3 TSL 1 (best) BASIC18.78■□□□□ 0.6
CTSL3PQ5NE16 GTPBP3-222ENST00000600625 2493 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
CTSL3PQ5NE16 KLHDC2-201ENST00000298307 5514 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
CTSL3PQ5NE16 SLC25A39-202ENST00000377095 1565 ntAPPRIS ALT1 TSL 1 (best) BASIC18.78■□□□□ 0.6
CTSL3PQ5NE16 SYNGR1-201ENST00000216155 497 ntTSL 3 BASIC18.78■□□□□ 0.6
CTSL3PQ5NE16 PTMS-201ENST00000309083 1139 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
CTSL3PQ5NE16 TLCD1-202ENST00000394933 784 ntTSL 2 BASIC18.78■□□□□ 0.6
CTSL3PQ5NE16 DUSP15-205ENST00000398084 1256 ntTSL 5 BASIC18.78■□□□□ 0.6
CTSL3PQ5NE16 LINC01122-201ENST00000422723 675 ntTSL 3 BASIC18.78■□□□□ 0.6
CTSL3PQ5NE16 PRSS44-201ENST00000515154 1146 ntBASIC18.78■□□□□ 0.6
CTSL3PQ5NE16 TCTN1-223ENST00000550703 2149 ntTSL 2 BASIC18.78■□□□□ 0.6
CTSL3PQ5NE16 HOXB8-201ENST00000239144 1823 ntAPPRIS P2 TSL 2 BASIC18.78■□□□□ 0.6
CTSL3PQ5NE16 GHDC-212ENST00000593209 1827 ntTSL 5 BASIC18.78■□□□□ 0.6
CTSL3PQ5NE16 CEP78-201ENST00000277082 2542 ntAPPRIS ALT2 TSL 2 BASIC18.78■□□□□ 0.6
CTSL3PQ5NE16 AC124066.1-201ENST00000581122 1660 ntTSL 5 BASIC18.78■□□□□ 0.6
CTSL3PQ5NE16 CCDC106-201ENST00000308964 1546 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
CTSL3PQ5NE16 ZNF623-203ENST00000526926 2612 ntAPPRIS ALT2 TSL 2 BASIC18.78■□□□□ 0.6
CTSL3PQ5NE16 ACADS-202ENST00000411593 1398 ntTSL 2 BASIC18.78■□□□□ 0.6
CTSL3PQ5NE16 ACHE-205ENST00000419336 1906 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
CTSL3PQ5NE16 PFN2-203ENST00000452853 1780 ntAPPRIS ALT1 TSL 1 (best) BASIC18.78■□□□□ 0.6
CTSL3PQ5NE16 PODXL2-201ENST00000342480 2186 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
CTSL3PQ5NE16 TMEM8B-204ENST00000439587 2150 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
CTSL3PQ5NE16 GCGR-202ENST00000570996 1872 ntAPPRIS ALT2 TSL 2 BASIC18.77■□□□□ 0.6
CTSL3PQ5NE16 TNFRSF8-202ENST00000413146 2363 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
CTSL3PQ5NE16 AHRR-204ENST00000506456 2350 ntTSL 2 BASIC18.77■□□□□ 0.6
CTSL3PQ5NE16 AK2-201ENST00000354858 1021 ntAPPRIS P4 TSL 1 (best) BASIC18.77■□□□□ 0.6
CTSL3PQ5NE16 NKAIN4-201ENST00000370307 793 ntTSL 5 BASIC18.77■□□□□ 0.6
CTSL3PQ5NE16 MDFI-202ENST00000373050 809 ntTSL 2 BASIC18.77■□□□□ 0.6
CTSL3PQ5NE16 RTBDN-202ENST00000393233 1000 ntAPPRIS ALT2 TSL 3 BASIC18.77■□□□□ 0.6
CTSL3PQ5NE16 CTNNBIP1-204ENST00000400904 1206 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Retrieved 100 of 98,524 protein–RNA pairs in 53.7 ms