Protein–RNA interactions for Protein: Q5JTY5

CBWD3, COBW domain-containing protein 3, humanhuman

Predictions only

Length 395 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CBWD3Q5JTY5 NOTCH2NL-204ENST00000579793 1954 ntAPPRIS ALT2 TSL 2 BASIC20.63■□□□□ 0.89
CBWD3Q5JTY5 BTNL9-210ENST00000515271 1444 ntTSL 2 BASIC20.62■□□□□ 0.89
CBWD3Q5JTY5 AL135905.2-201ENST00000584934 1404 ntBASIC20.62■□□□□ 0.89
CBWD3Q5JTY5 DNAJC28-204ENST00000617313 2237 ntAPPRIS P1 TSL 5 BASIC20.62■□□□□ 0.89
CBWD3Q5JTY5 LRCH4-201ENST00000310300 2552 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
CBWD3Q5JTY5 SLC31A2-201ENST00000259392 1785 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
CBWD3Q5JTY5 SRI-203ENST00000419179 1307 ntTSL 2 BASIC20.62■□□□□ 0.89
CBWD3Q5JTY5 GLYCTK-205ENST00000473032 935 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
CBWD3Q5JTY5 AC089999.2-201ENST00000552525 248 ntTSL 3 BASIC20.62■□□□□ 0.89
CBWD3Q5JTY5 AC233702.5-201ENST00000584107 538 ntBASIC20.62■□□□□ 0.89
CBWD3Q5JTY5 USP36-216ENST00000589424 970 ntTSL 5 BASIC20.62■□□□□ 0.89
CBWD3Q5JTY5 SMAD7-207ENST00000589634 1278 ntAPPRIS ALT1 TSL 4 BASIC20.62■□□□□ 0.89
CBWD3Q5JTY5 AC011298.2-201ENST00000617989 482 ntBASIC20.62■□□□□ 0.89
CBWD3Q5JTY5 NTAN1-211ENST00000622833 1049 ntTSL 2 BASIC20.62■□□□□ 0.89
CBWD3Q5JTY5 NTAN1-212ENST00000624579 1115 ntTSL 2 BASIC20.62■□□□□ 0.89
CBWD3Q5JTY5 GPRC5C-205ENST00000481232 1592 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
CBWD3Q5JTY5 METRN-204ENST00000568223 3325 ntAPPRIS P2 TSL 1 (best) BASIC20.62■□□□□ 0.89
CBWD3Q5JTY5 RIPK2-201ENST00000220751 2584 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
CBWD3Q5JTY5 GDPD1-201ENST00000284116 1821 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
CBWD3Q5JTY5 TRA2A-201ENST00000297071 1845 ntAPPRIS P3 TSL 1 (best) BASIC20.62■□□□□ 0.89
CBWD3Q5JTY5 ANKMY1-209ENST00000405523 1827 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
CBWD3Q5JTY5 SYBU-232ENST00000533171 2498 ntAPPRIS ALT2 TSL 2 BASIC20.62■□□□□ 0.89
CBWD3Q5JTY5 TCTN1-223ENST00000550703 2149 ntTSL 2 BASIC20.62■□□□□ 0.89
CBWD3Q5JTY5 YY1AP1-213ENST00000405763 2011 ntAPPRIS ALT2 TSL 1 (best) BASIC20.61■□□□□ 0.89
CBWD3Q5JTY5 ZNF394-203ENST00000426306 2017 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
CBWD3Q5JTY5 BICRA-204ENST00000614245 5697 ntAPPRIS ALT2 TSL 5 BASIC20.61■□□□□ 0.89
CBWD3Q5JTY5 CHMP4A-201ENST00000347519 1393 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
CBWD3Q5JTY5 SPSB1-201ENST00000328089 3120 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
CBWD3Q5JTY5 DDRGK1-201ENST00000354488 1306 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
CBWD3Q5JTY5 TMEM235-201ENST00000374946 2409 ntTSL 5 BASIC20.61■□□□□ 0.89
CBWD3Q5JTY5 WDR74-201ENST00000278856 1289 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
CBWD3Q5JTY5 LGALS7-201ENST00000378626 466 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
CBWD3Q5JTY5 POMC-202ENST00000380794 1295 ntAPPRIS P1 TSL 2 BASIC20.61■□□□□ 0.89
CBWD3Q5JTY5 HOXA9-202ENST00000396345 797 ntTSL 2 BASIC20.61■□□□□ 0.89
CBWD3Q5JTY5 AP000697.1-201ENST00000430607 339 ntTSL 5 BASIC20.61■□□□□ 0.89
CBWD3Q5JTY5 B3GAT3P1-201ENST00000471720 806 ntBASIC20.61■□□□□ 0.89
CBWD3Q5JTY5 CXCL2-202ENST00000508487 1218 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
CBWD3Q5JTY5 AF131216.3-201ENST00000525867 1099 ntTSL 2 BASIC20.61■□□□□ 0.89
CBWD3Q5JTY5 TNFRSF1B-204ENST00000536782 557 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
CBWD3Q5JTY5 ADGRD1-AS1-202ENST00000542980 1277 ntTSL 4 BASIC20.61■□□□□ 0.89
CBWD3Q5JTY5 AL031600.3-201ENST00000566287 1124 ntTSL 5 BASIC20.61■□□□□ 0.89
CBWD3Q5JTY5 AC005786.3-201ENST00000589360 565 ntTSL 3 BASIC20.61■□□□□ 0.89
CBWD3Q5JTY5 PGAM1-201ENST00000334828 1830 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
CBWD3Q5JTY5 TNFRSF8-202ENST00000413146 2363 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
CBWD3Q5JTY5 OTUD1-201ENST00000376495 2933 ntAPPRIS P1 BASIC20.61■□□□□ 0.89
CBWD3Q5JTY5 PARS2-201ENST00000371279 2347 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
CBWD3Q5JTY5 TRIM47-201ENST00000254816 2266 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
CBWD3Q5JTY5 LIN54-209ENST00000510557 2257 ntTSL 2 BASIC20.61■□□□□ 0.89
CBWD3Q5JTY5 ENTPD6-201ENST00000354989 2708 ntAPPRIS ALT2 TSL 1 (best) BASIC20.61■□□□□ 0.89
CBWD3Q5JTY5 TRAK2-202ENST00000430254 1436 ntTSL 2 BASIC20.61■□□□□ 0.89
CBWD3Q5JTY5 VBP1-201ENST00000286428 1686 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
CBWD3Q5JTY5 PODXL2-201ENST00000342480 2186 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
CBWD3Q5JTY5 ACADS-202ENST00000411593 1398 ntTSL 2 BASIC20.6■□□□□ 0.89
CBWD3Q5JTY5 TMEM129-202ENST00000382936 2810 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
CBWD3Q5JTY5 SMN1-209ENST00000514951 1308 ntTSL 2 BASIC20.6■□□□□ 0.89
CBWD3Q5JTY5 CDH22-201ENST00000372262 3661 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
CBWD3Q5JTY5 TH-202ENST00000333684 1535 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
CBWD3Q5JTY5 AC012618.2-201ENST00000428058 849 ntBASIC20.6■□□□□ 0.89
CBWD3Q5JTY5 CHAC1-203ENST00000487220 853 ntTSL 3 BASIC20.6■□□□□ 0.89
CBWD3Q5JTY5 TESMIN-209ENST00000544963 1235 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
CBWD3Q5JTY5 MIR6786-201ENST00000616843 113 ntBASIC20.6■□□□□ 0.89
CBWD3Q5JTY5 AC103746.1-201ENST00000617440 1133 ntTSL 3 BASIC20.6■□□□□ 0.89
CBWD3Q5JTY5 AC130371.2-201ENST00000619443 611 ntBASIC20.6■□□□□ 0.89
CBWD3Q5JTY5 BPIFB3-201ENST00000375494 1454 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
CBWD3Q5JTY5 MEN1-201ENST00000312049 2761 ntAPPRIS ALT1 TSL 1 (best) BASIC20.6■□□□□ 0.89
CBWD3Q5JTY5 NOP14-202ENST00000398071 2535 ntAPPRIS ALT2 TSL 1 (best) BASIC20.6■□□□□ 0.89
CBWD3Q5JTY5 GHDC-212ENST00000593209 1827 ntTSL 5 BASIC20.6■□□□□ 0.89
CBWD3Q5JTY5 FUCA1-201ENST00000374479 2047 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
CBWD3Q5JTY5 SLC25A39-202ENST00000377095 1565 ntAPPRIS ALT1 TSL 1 (best) BASIC20.59■□□□□ 0.89
CBWD3Q5JTY5 ABCB9-202ENST00000344275 2394 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
CBWD3Q5JTY5 TMEM74-201ENST00000297459 1741 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
CBWD3Q5JTY5 ACHE-205ENST00000419336 1906 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
CBWD3Q5JTY5 TSPAN4-204ENST00000397404 1462 ntAPPRIS P1 TSL 5 BASIC20.59■□□□□ 0.89
CBWD3Q5JTY5 SYNGR1-201ENST00000216155 497 ntTSL 3 BASIC20.59■□□□□ 0.89
CBWD3Q5JTY5 LIME1-201ENST00000309546 1178 ntAPPRIS P3 TSL 1 (best) BASIC20.59■□□□□ 0.89
CBWD3Q5JTY5 DUSP15-205ENST00000398084 1256 ntTSL 5 BASIC20.59■□□□□ 0.89
CBWD3Q5JTY5 AC007040.1-201ENST00000416229 477 ntTSL 3 BASIC20.59■□□□□ 0.89
CBWD3Q5JTY5 PEX26-203ENST00000428061 815 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
CBWD3Q5JTY5 KDM2B-217ENST00000543852 1188 ntTSL 5 BASIC20.59■□□□□ 0.89
CBWD3Q5JTY5 AL049780.2-201ENST00000556236 367 ntTSL 3 BASIC20.59■□□□□ 0.89
CBWD3Q5JTY5 AL049637.2-201ENST00000641778 930 ntBASIC20.59■□□□□ 0.89
CBWD3Q5JTY5 NOP56-201ENST00000329276 2400 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
CBWD3Q5JTY5 GAL3ST1-206ENST00000406955 1635 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
CBWD3Q5JTY5 PON1-201ENST00000222381 2568 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
CBWD3Q5JTY5 NR2F1-205ENST00000615873 1427 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
CBWD3Q5JTY5 TMEM8B-204ENST00000439587 2150 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
CBWD3Q5JTY5 GPR137-204ENST00000438980 1596 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
CBWD3Q5JTY5 AIRE-201ENST00000291582 2257 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
CBWD3Q5JTY5 WNT6-201ENST00000233948 1703 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
CBWD3Q5JTY5 PCCB-216ENST00000483687 1727 ntTSL 3 BASIC20.58■□□□□ 0.89
CBWD3Q5JTY5 FAM189B-204ENST00000368368 2609 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
CBWD3Q5JTY5 SCFD2-204ENST00000611795 1320 ntTSL 5 BASIC20.58■□□□□ 0.89
CBWD3Q5JTY5 OCSTAMP-201ENST00000279028 2043 ntAPPRIS P1 TSL 5 BASIC20.58■□□□□ 0.89
CBWD3Q5JTY5 P2RX5-203ENST00000547178 1998 ntAPPRIS ALT2 TSL 1 (best) BASIC20.58■□□□□ 0.89
CBWD3Q5JTY5 ASNS-206ENST00000437628 1638 ntTSL 2 BASIC20.58■□□□□ 0.89
CBWD3Q5JTY5 NT5C1A-201ENST00000235628 1107 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
CBWD3Q5JTY5 IL17C-201ENST00000244241 1044 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
CBWD3Q5JTY5 AK2-201ENST00000354858 1021 ntAPPRIS P4 TSL 1 (best) BASIC20.58■□□□□ 0.89
CBWD3Q5JTY5 NKAIN4-201ENST00000370307 793 ntTSL 5 BASIC20.58■□□□□ 0.89
CBWD3Q5JTY5 SGO1-AS1-202ENST00000448208 819 ntTSL 3 BASIC20.58■□□□□ 0.89
Retrieved 100 of 98,524 protein–RNA pairs in 100.3 ms